Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC6.58□□□□□ -1.36
PDGFAP04085 AC114752.2-201ENST00000424119 404 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PDGFAP04085 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC6.58□□□□□ -1.36
PDGFAP04085 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC6.58□□□□□ -1.36
PDGFAP04085 RPS27AP6-201ENST00000427962 448 ntBASIC6.58□□□□□ -1.36
PDGFAP04085 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC6.58□□□□□ -1.36
PDGFAP04085 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC6.58□□□□□ -1.36
PDGFAP04085 RPS26P40-201ENST00000435209 294 ntBASIC6.58□□□□□ -1.36
PDGFAP04085 AL954705.1-201ENST00000435277 559 ntBASIC6.58□□□□□ -1.36
PDGFAP04085 AC104850.1-201ENST00000435940 476 ntBASIC6.58□□□□□ -1.36
PDGFAP04085 CALM1P1-201ENST00000442082 433 ntBASIC6.58□□□□□ -1.36
PDGFAP04085 IGKV1OR10-1-201ENST00000442306 329 ntBASIC6.58□□□□□ -1.36
PDGFAP04085 AL031681.1-201ENST00000443304 400 ntBASIC6.58□□□□□ -1.36
PDGFAP04085 AC092601.1-201ENST00000444526 383 ntBASIC6.58□□□□□ -1.36
PDGFAP04085 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC6.58□□□□□ -1.36
PDGFAP04085 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC6.58□□□□□ -1.36
PDGFAP04085 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC6.58□□□□□ -1.36
PDGFAP04085 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC6.58□□□□□ -1.36
PDGFAP04085 RAD23BP3-201ENST00000454157 1152 ntBASIC6.58□□□□□ -1.36
PDGFAP04085 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC6.58□□□□□ -1.36
PDGFAP04085 MTCO1P42-201ENST00000457379 726 ntBASIC6.58□□□□□ -1.36
PDGFAP04085 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC6.58□□□□□ -1.36
PDGFAP04085 IGKV1OR22-5-201ENST00000458718 354 ntBASIC6.58□□□□□ -1.36
PDGFAP04085 RN7SL325P-201ENST00000460434 283 ntBASIC6.58□□□□□ -1.36
PDGFAP04085 AC117395.2-201ENST00000463122 1128 ntBASIC6.58□□□□□ -1.36
PDGFAP04085 RPL12P31-201ENST00000478433 450 ntBASIC6.58□□□□□ -1.36
PDGFAP04085 EIF3LP3-201ENST00000495197 822 ntBASIC6.58□□□□□ -1.36
PDGFAP04085 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC6.58□□□□□ -1.36
PDGFAP04085 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.58□□□□□ -1.36
PDGFAP04085 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.58□□□□□ -1.36
PDGFAP04085 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC6.58□□□□□ -1.36
PDGFAP04085 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC6.58□□□□□ -1.36
PDGFAP04085 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.58□□□□□ -1.36
PDGFAP04085 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC6.58□□□□□ -1.36
PDGFAP04085 AP003034.1-201ENST00000534621 422 ntBASIC6.58□□□□□ -1.36
PDGFAP04085 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC6.58□□□□□ -1.36
PDGFAP04085 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC6.58□□□□□ -1.36
PDGFAP04085 AL121579.2-201ENST00000555466 590 ntBASIC6.58□□□□□ -1.36
PDGFAP04085 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC6.58□□□□□ -1.36
PDGFAP04085 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC6.58□□□□□ -1.36
PDGFAP04085 RN7SL178P-201ENST00000582930 304 ntBASIC6.58□□□□□ -1.36
PDGFAP04085 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC6.58□□□□□ -1.36
PDGFAP04085 AC012507.3-201ENST00000603556 477 ntBASIC6.58□□□□□ -1.36
PDGFAP04085 AL359091.2-201ENST00000609303 556 ntBASIC6.58□□□□□ -1.36
PDGFAP04085 AC140479.4-205ENST00000636339 820 ntBASIC6.58□□□□□ -1.36
PDGFAP04085 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC6.58□□□□□ -1.36
PDGFAP04085 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC6.58□□□□□ -1.36
PDGFAP04085 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PDGFAP04085 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PDGFAP04085 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PDGFAP04085 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PDGFAP04085 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PDGFAP04085 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PDGFAP04085 LINC01653-201ENST00000456026 1728 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PDGFAP04085 AC090132.1-201ENST00000524071 1480 ntBASIC6.58□□□□□ -1.36
PDGFAP04085 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
PDGFAP04085 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.58□□□□□ -1.36
PDGFAP04085 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PDGFAP04085 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
PDGFAP04085 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
PDGFAP04085 CASC19-204ENST00000641001 2055 ntBASIC6.57□□□□□ -1.36
PDGFAP04085 SAMMSON-222ENST00000641901 2727 ntBASIC6.57□□□□□ -1.36
PDGFAP04085 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PDGFAP04085 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC6.57□□□□□ -1.36
PDGFAP04085 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PDGFAP04085 AC011374.1-201ENST00000564471 1567 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PDGFAP04085 AC105749.1-201ENST00000631338 2008 ntBASIC6.57□□□□□ -1.36
PDGFAP04085 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC6.57□□□□□ -1.36
PDGFAP04085 SNX18P3-202ENST00000565670 1750 ntBASIC6.57□□□□□ -1.36
PDGFAP04085 TMEM209-206ENST00000473456 1961 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PDGFAP04085 NEXN-202ENST00000334785 2607 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PDGFAP04085 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PDGFAP04085 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PDGFAP04085 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PDGFAP04085 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.57□□□□□ -1.36
PDGFAP04085 AC022031.1-201ENST00000585985 2593 ntBASIC6.57□□□□□ -1.36
PDGFAP04085 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
PDGFAP04085 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PDGFAP04085 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
PDGFAP04085 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PDGFAP04085 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
PDGFAP04085 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC6.57□□□□□ -1.36
PDGFAP04085 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
PDGFAP04085 RNU6-777P-201ENST00000364265 104 ntBASIC6.57□□□□□ -1.36
PDGFAP04085 RN7SKP191-201ENST00000364713 306 ntBASIC6.57□□□□□ -1.36
PDGFAP04085 RNA5SP152-201ENST00000365184 110 ntBASIC6.57□□□□□ -1.36
PDGFAP04085 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC6.57□□□□□ -1.36
PDGFAP04085 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.57□□□□□ -1.36
PDGFAP04085 RNU6-769P-201ENST00000384407 104 ntBASIC6.57□□□□□ -1.36
PDGFAP04085 MIR152-201ENST00000385212 87 ntBASIC6.57□□□□□ -1.36
PDGFAP04085 FDPSP5-201ENST00000399474 1057 ntBASIC6.57□□□□□ -1.36
PDGFAP04085 HMGB3P7-201ENST00000400214 611 ntBASIC6.57□□□□□ -1.36
PDGFAP04085 RNU6-195P-201ENST00000411352 109 ntBASIC6.57□□□□□ -1.36
PDGFAP04085 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC6.57□□□□□ -1.36
PDGFAP04085 AMD1P2-201ENST00000412936 992 ntBASIC6.57□□□□□ -1.36
PDGFAP04085 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC6.57□□□□□ -1.36
PDGFAP04085 CHCHD3P1-201ENST00000425516 676 ntBASIC6.57□□□□□ -1.36
PDGFAP04085 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.57□□□□□ -1.36
PDGFAP04085 RPL22P17-201ENST00000438729 315 ntBASIC6.57□□□□□ -1.36
PDGFAP04085 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms