Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC7.46□□□□□ -1.21
RAPGEF3O95398 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
RAPGEF3O95398 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC7.46□□□□□ -1.21
RAPGEF3O95398 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
RAPGEF3O95398 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.21
RAPGEF3O95398 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
RAPGEF3O95398 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC7.46□□□□□ -1.22
RAPGEF3O95398 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
RAPGEF3O95398 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
RAPGEF3O95398 MAX-203ENST00000341653 330 ntTSL 2 BASIC7.46□□□□□ -1.22
RAPGEF3O95398 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
RAPGEF3O95398 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
RAPGEF3O95398 IGKV1OR9-1-201ENST00000424370 284 ntBASIC7.46□□□□□ -1.22
RAPGEF3O95398 AC006946.1-201ENST00000429106 328 ntBASIC7.46□□□□□ -1.22
RAPGEF3O95398 NDUFB4P8-201ENST00000435351 367 ntBASIC7.46□□□□□ -1.22
RAPGEF3O95398 MTND2P6-201ENST00000455337 1030 ntBASIC7.46□□□□□ -1.22
RAPGEF3O95398 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC7.46□□□□□ -1.22
RAPGEF3O95398 AC104849.1-201ENST00000462623 405 ntBASIC7.46□□□□□ -1.22
RAPGEF3O95398 AC104629.2-201ENST00000468627 598 ntBASIC7.46□□□□□ -1.22
RAPGEF3O95398 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC7.46□□□□□ -1.22
RAPGEF3O95398 AC098976.1-201ENST00000513014 541 ntBASIC7.46□□□□□ -1.22
RAPGEF3O95398 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC7.46□□□□□ -1.22
RAPGEF3O95398 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC7.46□□□□□ -1.22
RAPGEF3O95398 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC7.46□□□□□ -1.22
RAPGEF3O95398 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
RAPGEF3O95398 FAM27B-201ENST00000610601 213 ntBASIC7.46□□□□□ -1.22
RAPGEF3O95398 AC018628.1-201ENST00000624147 3819 ntBASIC7.46□□□□□ -1.22
RAPGEF3O95398 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC7.46□□□□□ -1.22
RAPGEF3O95398 AC020656.2-201ENST00000613291 5309 ntBASIC7.46□□□□□ -1.22
RAPGEF3O95398 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
RAPGEF3O95398 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
RAPGEF3O95398 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
RAPGEF3O95398 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.22
RAPGEF3O95398 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
RAPGEF3O95398 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
RAPGEF3O95398 NSF-206ENST00000575068 2667 ntTSL 2 BASIC7.45□□□□□ -1.22
RAPGEF3O95398 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC7.45□□□□□ -1.22
RAPGEF3O95398 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC7.45□□□□□ -1.22
RAPGEF3O95398 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC7.45□□□□□ -1.22
RAPGEF3O95398 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
RAPGEF3O95398 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
RAPGEF3O95398 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC7.45□□□□□ -1.22
RAPGEF3O95398 HYALP1-201ENST00000417674 1279 ntBASIC7.45□□□□□ -1.22
RAPGEF3O95398 AC106883.1-201ENST00000418805 562 ntBASIC7.45□□□□□ -1.22
RAPGEF3O95398 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC7.45□□□□□ -1.22
RAPGEF3O95398 RPL7AP52-201ENST00000458096 790 ntBASIC7.45□□□□□ -1.22
RAPGEF3O95398 CYCSP34-201ENST00000458172 304 ntBASIC7.45□□□□□ -1.22
RAPGEF3O95398 FPGT-203ENST00000467578 601 ntTSL 2 BASIC7.45□□□□□ -1.22
RAPGEF3O95398 RN7SL814P-201ENST00000487715 300 ntBASIC7.45□□□□□ -1.22
RAPGEF3O95398 AC093770.1-201ENST00000511559 571 ntBASIC7.45□□□□□ -1.22
RAPGEF3O95398 AC026407.1-201ENST00000518369 204 ntBASIC7.45□□□□□ -1.22
RAPGEF3O95398 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
RAPGEF3O95398 HMGB1P46-201ENST00000520062 610 ntBASIC7.45□□□□□ -1.22
RAPGEF3O95398 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC7.45□□□□□ -1.22
RAPGEF3O95398 AC079064.1-201ENST00000528365 362 ntBASIC7.45□□□□□ -1.22
RAPGEF3O95398 MTND1P24-201ENST00000552175 861 ntBASIC7.45□□□□□ -1.22
RAPGEF3O95398 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC7.45□□□□□ -1.22
RAPGEF3O95398 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC7.45□□□□□ -1.22
RAPGEF3O95398 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC7.45□□□□□ -1.22
RAPGEF3O95398 AC008759.3-201ENST00000613300 508 ntBASIC7.45□□□□□ -1.22
RAPGEF3O95398 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC7.45□□□□□ -1.22
RAPGEF3O95398 DMD-228ENST00000541735 7080 ntTSL 5 BASIC7.45□□□□□ -1.22
RAPGEF3O95398 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC7.45□□□□□ -1.22
RAPGEF3O95398 AC006210.2-201ENST00000367074 1545 ntBASIC7.45□□□□□ -1.22
RAPGEF3O95398 AC120338.1-201ENST00000625074 1541 ntBASIC7.45□□□□□ -1.22
RAPGEF3O95398 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
RAPGEF3O95398 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC7.45□□□□□ -1.22
RAPGEF3O95398 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RAPGEF3O95398 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RAPGEF3O95398 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC7.45□□□□□ -1.22
RAPGEF3O95398 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
RAPGEF3O95398 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC7.44□□□□□ -1.22
RAPGEF3O95398 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC7.44□□□□□ -1.22
RAPGEF3O95398 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
RAPGEF3O95398 CR382285.2-201ENST00000624662 1495 ntBASIC7.44□□□□□ -1.22
RAPGEF3O95398 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC7.44□□□□□ -1.22
RAPGEF3O95398 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
RAPGEF3O95398 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
RAPGEF3O95398 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RAPGEF3O95398 OR13Z1P-201ENST00000416141 834 ntBASIC7.44□□□□□ -1.22
RAPGEF3O95398 AC017078.1-201ENST00000416146 368 ntBASIC7.44□□□□□ -1.22
RAPGEF3O95398 ATG4AP1-201ENST00000416893 538 ntBASIC7.44□□□□□ -1.22
RAPGEF3O95398 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC7.44□□□□□ -1.22
RAPGEF3O95398 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
RAPGEF3O95398 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC7.44□□□□□ -1.22
RAPGEF3O95398 Z95327.1-201ENST00000446082 482 ntBASIC7.44□□□□□ -1.22
RAPGEF3O95398 BUD31P2-201ENST00000449374 300 ntBASIC7.44□□□□□ -1.22
RAPGEF3O95398 RPS5P7-201ENST00000456664 608 ntBASIC7.44□□□□□ -1.22
RAPGEF3O95398 PSAT1P4-201ENST00000466500 526 ntBASIC7.44□□□□□ -1.22
RAPGEF3O95398 AC105918.1-201ENST00000474399 838 ntBASIC7.44□□□□□ -1.22
RAPGEF3O95398 NAMPTP2-201ENST00000505629 1115 ntBASIC7.44□□□□□ -1.22
RAPGEF3O95398 AC114322.1-201ENST00000506771 926 ntBASIC7.44□□□□□ -1.22
RAPGEF3O95398 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
RAPGEF3O95398 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
RAPGEF3O95398 MTCO3P27-201ENST00000514397 196 ntBASIC7.44□□□□□ -1.22
RAPGEF3O95398 AP003355.1-201ENST00000518956 587 ntBASIC7.44□□□□□ -1.22
RAPGEF3O95398 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC7.44□□□□□ -1.22
RAPGEF3O95398 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC7.44□□□□□ -1.22
RAPGEF3O95398 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC7.44□□□□□ -1.22
RAPGEF3O95398 AC084759.1-201ENST00000561168 290 ntBASIC7.44□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms