Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 IGKV7-3-201ENST00000357453 298 ntBASIC4.88□□□□□ -1.63
NKX2-2O95096 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
NKX2-2O95096 U3.25-201ENST00000391209 220 ntBASIC4.88□□□□□ -1.63
NKX2-2O95096 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.88□□□□□ -1.63
NKX2-2O95096 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.88□□□□□ -1.63
NKX2-2O95096 AC093655.2-201ENST00000425735 631 ntBASIC4.88□□□□□ -1.63
NKX2-2O95096 AL161722.2-201ENST00000434731 981 ntBASIC4.88□□□□□ -1.63
NKX2-2O95096 GAPDHP58-201ENST00000438477 1006 ntBASIC4.88□□□□□ -1.63
NKX2-2O95096 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC4.88□□□□□ -1.63
NKX2-2O95096 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC4.88□□□□□ -1.63
NKX2-2O95096 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.88□□□□□ -1.63
NKX2-2O95096 RPL31P44-201ENST00000447680 377 ntBASIC4.88□□□□□ -1.63
NKX2-2O95096 AC008280.2-201ENST00000455473 307 ntBASIC4.88□□□□□ -1.63
NKX2-2O95096 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.88□□□□□ -1.63
NKX2-2O95096 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.88□□□□□ -1.63
NKX2-2O95096 WDR78-207ENST00000488333 613 ntTSL 3 BASIC4.88□□□□□ -1.63
NKX2-2O95096 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.88□□□□□ -1.63
NKX2-2O95096 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.88□□□□□ -1.63
NKX2-2O95096 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.88□□□□□ -1.63
NKX2-2O95096 SUMO2P5-201ENST00000506790 245 ntBASIC4.88□□□□□ -1.63
NKX2-2O95096 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NKX2-2O95096 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC4.88□□□□□ -1.63
NKX2-2O95096 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.88□□□□□ -1.63
NKX2-2O95096 AC118942.1-201ENST00000529674 1035 ntBASIC4.88□□□□□ -1.63
NKX2-2O95096 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.88□□□□□ -1.63
NKX2-2O95096 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.88□□□□□ -1.63
NKX2-2O95096 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NKX2-2O95096 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NKX2-2O95096 AC012146.2-201ENST00000576545 416 ntBASIC4.88□□□□□ -1.63
NKX2-2O95096 RN7SL708P-201ENST00000580952 299 ntBASIC4.88□□□□□ -1.63
NKX2-2O95096 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC4.88□□□□□ -1.63
NKX2-2O95096 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NKX2-2O95096 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
NKX2-2O95096 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.88□□□□□ -1.63
NKX2-2O95096 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.88□□□□□ -1.63
NKX2-2O95096 AC011445.2-201ENST00000599274 173 ntBASIC4.88□□□□□ -1.63
NKX2-2O95096 AC096947.1-201ENST00000603233 470 ntBASIC4.88□□□□□ -1.63
NKX2-2O95096 AC055764.2-201ENST00000610089 670 ntBASIC4.88□□□□□ -1.63
NKX2-2O95096 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
NKX2-2O95096 STMN1P1-201ENST00000617809 440 ntBASIC4.88□□□□□ -1.63
NKX2-2O95096 AC136428.4-201ENST00000634254 1155 ntBASIC4.88□□□□□ -1.63
NKX2-2O95096 METTL15-211ENST00000634762 718 ntTSL 5 BASIC4.88□□□□□ -1.63
NKX2-2O95096 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
NKX2-2O95096 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
NKX2-2O95096 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.88□□□□□ -1.63
NKX2-2O95096 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
NKX2-2O95096 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.88□□□□□ -1.63
NKX2-2O95096 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NKX2-2O95096 AC092747.4-201ENST00000620519 1861 ntBASIC4.88□□□□□ -1.63
NKX2-2O95096 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
NKX2-2O95096 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.87□□□□□ -1.63
NKX2-2O95096 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
NKX2-2O95096 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
NKX2-2O95096 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
NKX2-2O95096 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
NKX2-2O95096 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
NKX2-2O95096 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
NKX2-2O95096 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
NKX2-2O95096 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.87□□□□□ -1.63
NKX2-2O95096 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
NKX2-2O95096 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.87□□□□□ -1.63
NKX2-2O95096 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
NKX2-2O95096 RNU5E-10P-201ENST00000363506 118 ntBASIC4.87□□□□□ -1.63
NKX2-2O95096 RN7SKP160-201ENST00000363804 340 ntBASIC4.87□□□□□ -1.63
NKX2-2O95096 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.87□□□□□ -1.63
NKX2-2O95096 RNU1-74P-201ENST00000384108 171 ntBASIC4.87□□□□□ -1.63
NKX2-2O95096 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC4.87□□□□□ -1.63
NKX2-2O95096 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.87□□□□□ -1.63
NKX2-2O95096 AC048351.1-201ENST00000420064 602 ntBASIC4.87□□□□□ -1.63
NKX2-2O95096 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.87□□□□□ -1.63
NKX2-2O95096 VTI1BP4-201ENST00000427516 527 ntBASIC4.87□□□□□ -1.63
NKX2-2O95096 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.87□□□□□ -1.63
NKX2-2O95096 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.87□□□□□ -1.63
NKX2-2O95096 RPL5P25-201ENST00000441148 775 ntBASIC4.87□□□□□ -1.63
NKX2-2O95096 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.87□□□□□ -1.63
NKX2-2O95096 PRPF38AP1-201ENST00000451976 933 ntBASIC4.87□□□□□ -1.63
NKX2-2O95096 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC4.87□□□□□ -1.63
NKX2-2O95096 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC4.87□□□□□ -1.63
NKX2-2O95096 RN7SL189P-201ENST00000468631 289 ntBASIC4.87□□□□□ -1.63
NKX2-2O95096 SIAH1P1-201ENST00000479411 923 ntBASIC4.87□□□□□ -1.63
NKX2-2O95096 RPS27AP16-201ENST00000492222 470 ntBASIC4.87□□□□□ -1.63
NKX2-2O95096 PRELID3BP6-201ENST00000503839 571 ntBASIC4.87□□□□□ -1.63
NKX2-2O95096 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
NKX2-2O95096 BX510359.5-201ENST00000515651 304 ntBASIC4.87□□□□□ -1.63
NKX2-2O95096 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.87□□□□□ -1.63
NKX2-2O95096 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.87□□□□□ -1.63
NKX2-2O95096 AC040958.1-201ENST00000561102 201 ntBASIC4.87□□□□□ -1.63
NKX2-2O95096 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.87□□□□□ -1.63
NKX2-2O95096 ATP5F1P7-201ENST00000567330 760 ntBASIC4.87□□□□□ -1.63
NKX2-2O95096 AL606834.3-201ENST00000602615 496 ntBASIC4.87□□□□□ -1.63
NKX2-2O95096 AC069431.2-201ENST00000604149 1099 ntBASIC4.87□□□□□ -1.63
NKX2-2O95096 AC023813.4-201ENST00000607580 580 ntBASIC4.87□□□□□ -1.63
NKX2-2O95096 AC084824.4-201ENST00000620106 731 ntBASIC4.87□□□□□ -1.63
NKX2-2O95096 MIR6837-201ENST00000620884 64 ntBASIC4.87□□□□□ -1.63
NKX2-2O95096 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.87□□□□□ -1.63
NKX2-2O95096 U6.107-201ENST00000637108 79 ntBASIC4.87□□□□□ -1.63
NKX2-2O95096 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
NKX2-2O95096 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
NKX2-2O95096 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
NKX2-2O95096 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms