Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.54□□□□□ -1.68
SCN2BO60939 AP000936.3-201ENST00000438127 255 ntBASIC4.54□□□□□ -1.68
SCN2BO60939 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC4.54□□□□□ -1.68
SCN2BO60939 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.54□□□□□ -1.68
SCN2BO60939 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC4.54□□□□□ -1.68
SCN2BO60939 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.54□□□□□ -1.68
SCN2BO60939 RN7SL629P-201ENST00000489622 285 ntBASIC4.54□□□□□ -1.68
SCN2BO60939 RPL37AP8-201ENST00000494116 276 ntBASIC4.54□□□□□ -1.68
SCN2BO60939 AC004980.4-201ENST00000513375 203 ntBASIC4.54□□□□□ -1.68
SCN2BO60939 AF186190.1-201ENST00000517470 480 ntBASIC4.54□□□□□ -1.68
SCN2BO60939 AC025423.2-201ENST00000537570 439 ntBASIC4.54□□□□□ -1.68
SCN2BO60939 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.54□□□□□ -1.68
SCN2BO60939 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.54□□□□□ -1.68
SCN2BO60939 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.54□□□□□ -1.68
SCN2BO60939 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.54□□□□□ -1.68
SCN2BO60939 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.54□□□□□ -1.68
SCN2BO60939 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.54□□□□□ -1.68
SCN2BO60939 MIR3691-201ENST00000578066 90 ntBASIC4.54□□□□□ -1.68
SCN2BO60939 RN7SL52P-201ENST00000584271 284 ntBASIC4.54□□□□□ -1.68
SCN2BO60939 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.54□□□□□ -1.68
SCN2BO60939 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.54□□□□□ -1.68
SCN2BO60939 AC009163.6-201ENST00000612367 342 ntBASIC4.54□□□□□ -1.68
SCN2BO60939 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.54□□□□□ -1.68
SCN2BO60939 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
SCN2BO60939 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
SCN2BO60939 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
SCN2BO60939 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
SCN2BO60939 C4BPAP1-201ENST00000415474 1893 ntBASIC4.54□□□□□ -1.68
SCN2BO60939 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SCN2BO60939 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SCN2BO60939 AL445487.1-201ENST00000415694 1580 ntBASIC4.53□□□□□ -1.68
SCN2BO60939 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
SCN2BO60939 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
SCN2BO60939 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SCN2BO60939 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SCN2BO60939 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
SCN2BO60939 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SCN2BO60939 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SCN2BO60939 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC4.53□□□□□ -1.68
SCN2BO60939 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
SCN2BO60939 U8.4-201ENST00000363626 134 ntBASIC4.53□□□□□ -1.68
SCN2BO60939 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
SCN2BO60939 AL021331.1-201ENST00000402817 582 ntBASIC4.53□□□□□ -1.68
SCN2BO60939 OR51B3P-201ENST00000412287 913 ntBASIC4.53□□□□□ -1.68
SCN2BO60939 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.53□□□□□ -1.68
SCN2BO60939 RPS17P8-201ENST00000434525 335 ntBASIC4.53□□□□□ -1.68
SCN2BO60939 AC092447.2-201ENST00000435487 669 ntBASIC4.53□□□□□ -1.68
SCN2BO60939 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.53□□□□□ -1.68
SCN2BO60939 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.53□□□□□ -1.68
SCN2BO60939 AC104651.2-201ENST00000447549 528 ntBASIC4.53□□□□□ -1.68
SCN2BO60939 RN7SL727P-201ENST00000482164 296 ntBASIC4.53□□□□□ -1.68
SCN2BO60939 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.53□□□□□ -1.68
SCN2BO60939 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC4.53□□□□□ -1.68
SCN2BO60939 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.53□□□□□ -1.68
SCN2BO60939 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.53□□□□□ -1.68
SCN2BO60939 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.53□□□□□ -1.68
SCN2BO60939 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.53□□□□□ -1.68
SCN2BO60939 RN7SL802P-201ENST00000577858 299 ntBASIC4.53□□□□□ -1.68
SCN2BO60939 MIR5699-201ENST00000578903 90 ntBASIC4.53□□□□□ -1.68
SCN2BO60939 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.53□□□□□ -1.68
SCN2BO60939 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.53□□□□□ -1.68
SCN2BO60939 AL161912.3-201ENST00000605404 628 ntBASIC4.53□□□□□ -1.68
SCN2BO60939 AP001521.2-201ENST00000608772 546 ntBASIC4.53□□□□□ -1.68
SCN2BO60939 AC004241.3-201ENST00000611728 517 ntBASIC4.53□□□□□ -1.68
SCN2BO60939 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC4.53□□□□□ -1.68
SCN2BO60939 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.53□□□□□ -1.68
SCN2BO60939 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.53□□□□□ -1.68
SCN2BO60939 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SCN2BO60939 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SCN2BO60939 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SCN2BO60939 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
SCN2BO60939 UGT2B26P-201ENST00000508672 1613 ntBASIC4.53□□□□□ -1.68
SCN2BO60939 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.69
SCN2BO60939 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SCN2BO60939 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SCN2BO60939 AL121950.1-201ENST00000624993 2077 ntBASIC4.52□□□□□ -1.69
SCN2BO60939 AL672167.1-203ENST00000641299 2975 ntBASIC4.52□□□□□ -1.69
SCN2BO60939 AC090971.4-201ENST00000560291 1800 ntBASIC4.52□□□□□ -1.69
SCN2BO60939 RNU6-1331P-201ENST00000363658 106 ntBASIC4.52□□□□□ -1.69
SCN2BO60939 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SCN2BO60939 AP002530.1-201ENST00000405705 684 ntBASIC4.52□□□□□ -1.69
SCN2BO60939 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.52□□□□□ -1.69
SCN2BO60939 EIF4A1P3-201ENST00000411521 244 ntBASIC4.52□□□□□ -1.69
SCN2BO60939 GLUD1P9-201ENST00000420997 1173 ntBASIC4.52□□□□□ -1.69
SCN2BO60939 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.52□□□□□ -1.69
SCN2BO60939 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SCN2BO60939 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.52□□□□□ -1.69
SCN2BO60939 AC147055.3-201ENST00000510547 851 ntBASIC4.52□□□□□ -1.69
SCN2BO60939 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SCN2BO60939 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.52□□□□□ -1.69
SCN2BO60939 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.52□□□□□ -1.69
SCN2BO60939 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.52□□□□□ -1.69
SCN2BO60939 RN7SL753P-201ENST00000581238 290 ntBASIC4.52□□□□□ -1.69
SCN2BO60939 AC209154.1-201ENST00000582156 337 ntBASIC4.52□□□□□ -1.69
SCN2BO60939 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.52□□□□□ -1.69
SCN2BO60939 AC005520.3-201ENST00000602874 370 ntBASIC4.52□□□□□ -1.69
SCN2BO60939 AC130352.1-201ENST00000602979 661 ntBASIC4.52□□□□□ -1.69
SCN2BO60939 AC020910.3-201ENST00000603701 874 ntBASIC4.52□□□□□ -1.69
SCN2BO60939 OR7M1P-201ENST00000608946 533 ntBASIC4.52□□□□□ -1.69
SCN2BO60939 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms