Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
O00370 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC5.25□□□□□ -1.57
O00370 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
O00370 RNA5SP392-201ENST00000516905 112 ntBASIC5.25□□□□□ -1.57
O00370 AC104997.1-201ENST00000519761 717 ntBASIC5.25□□□□□ -1.57
O00370 AC026688.1-201ENST00000520639 1168 ntBASIC5.25□□□□□ -1.57
O00370 RPL23AP53-201ENST00000521854 457 ntBASIC5.25□□□□□ -1.57
O00370 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.25□□□□□ -1.57
O00370 OR5AZ1P-201ENST00000527448 943 ntBASIC5.25□□□□□ -1.57
O00370 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC5.25□□□□□ -1.57
O00370 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC5.25□□□□□ -1.57
O00370 TVP23CP2-201ENST00000571473 623 ntBASIC5.25□□□□□ -1.57
O00370 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC5.25□□□□□ -1.57
O00370 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC5.25□□□□□ -1.57
O00370 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.25□□□□□ -1.57
O00370 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.25□□□□□ -1.57
O00370 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.25□□□□□ -1.57
O00370 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
O00370 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
O00370 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
O00370 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.25□□□□□ -1.57
O00370 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
O00370 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
O00370 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
O00370 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
O00370 AC083843.2-201ENST00000568248 6253 ntBASIC5.24□□□□□ -1.57
O00370 VPS35P1-201ENST00000563400 1518 ntBASIC5.24□□□□□ -1.57
O00370 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
O00370 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
O00370 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.24□□□□□ -1.57
O00370 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.24□□□□□ -1.57
O00370 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
O00370 AL109941.1-201ENST00000401925 229 ntBASIC5.24□□□□□ -1.57
O00370 AL021331.1-201ENST00000402817 582 ntBASIC5.24□□□□□ -1.57
O00370 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.24□□□□□ -1.57
O00370 CHEK2P3-201ENST00000416118 248 ntBASIC5.24□□□□□ -1.57
O00370 EIF4A1P1-201ENST00000420241 934 ntBASIC5.24□□□□□ -1.57
O00370 MTND4LP13-201ENST00000425022 298 ntBASIC5.24□□□□□ -1.57
O00370 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.24□□□□□ -1.57
O00370 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.24□□□□□ -1.57
O00370 AC093414.1-201ENST00000434712 514 ntBASIC5.24□□□□□ -1.57
O00370 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.24□□□□□ -1.57
O00370 AL606490.8-201ENST00000441624 319 ntBASIC5.24□□□□□ -1.57
O00370 NPM1P39-201ENST00000449818 867 ntBASIC5.24□□□□□ -1.57
O00370 AL591623.2-201ENST00000449978 222 ntBASIC5.24□□□□□ -1.57
O00370 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.24□□□□□ -1.57
O00370 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.24□□□□□ -1.57
O00370 AL445433.1-201ENST00000457507 257 ntBASIC5.24□□□□□ -1.57
O00370 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.24□□□□□ -1.57
O00370 RN7SL329P-201ENST00000467740 299 ntBASIC5.24□□□□□ -1.57
O00370 RN7SL97P-201ENST00000486780 299 ntBASIC5.24□□□□□ -1.57
O00370 RN7SL591P-201ENST00000496150 292 ntBASIC5.24□□□□□ -1.57
O00370 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.24□□□□□ -1.57
O00370 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
O00370 AL671862.1-201ENST00000515851 349 ntBASIC5.24□□□□□ -1.57
O00370 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.24□□□□□ -1.57
O00370 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.24□□□□□ -1.57
O00370 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.24□□□□□ -1.57
O00370 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.24□□□□□ -1.57
O00370 AL137072.1-201ENST00000603444 466 ntBASIC5.24□□□□□ -1.57
O00370 AC073111.2-201ENST00000605657 1075 ntBASIC5.24□□□□□ -1.57
O00370 AL021707.7-201ENST00000607991 416 ntBASIC5.24□□□□□ -1.57
O00370 AC007620.3-201ENST00000608131 497 ntBASIC5.24□□□□□ -1.57
O00370 AC211433.2-201ENST00000608433 387 ntBASIC5.24□□□□□ -1.57
O00370 AL592494.3-201ENST00000609485 464 ntBASIC5.24□□□□□ -1.57
O00370 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.24□□□□□ -1.57
O00370 AC091905.4-201ENST00000623432 202 ntBASIC5.24□□□□□ -1.57
O00370 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.24□□□□□ -1.57
O00370 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
O00370 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.24□□□□□ -1.57
O00370 INTS6P1-201ENST00000504674 2530 ntBASIC5.24□□□□□ -1.57
O00370 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
O00370 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
O00370 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
O00370 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
O00370 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
O00370 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
O00370 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
O00370 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
O00370 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.23□□□□□ -1.57
O00370 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
O00370 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
O00370 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
O00370 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
O00370 MIR365B-201ENST00000362317 111 ntBASIC5.23□□□□□ -1.57
O00370 RNU6-152P-201ENST00000384037 107 ntBASIC5.23□□□□□ -1.57
O00370 AL357515.1-201ENST00000402967 542 ntBASIC5.23□□□□□ -1.57
O00370 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.23□□□□□ -1.57
O00370 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.23□□□□□ -1.57
O00370 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.23□□□□□ -1.57
O00370 AC000111.2-201ENST00000448200 210 ntBASIC5.23□□□□□ -1.57
O00370 RAB28P3-201ENST00000448325 597 ntBASIC5.23□□□□□ -1.57
O00370 AC022431.1-201ENST00000450941 438 ntBASIC5.23□□□□□ -1.57
O00370 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
O00370 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.23□□□□□ -1.57
O00370 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
O00370 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.23□□□□□ -1.57
O00370 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.23□□□□□ -1.57
O00370 COL6A4P2-205ENST00000509855 506 ntBASIC5.23□□□□□ -1.57
O00370 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms