Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.48□□□□□ -1.69
VPS29Q9UBQ0 AC209154.1-201ENST00000582156 337 ntBASIC4.48□□□□□ -1.69
VPS29Q9UBQ0 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
VPS29Q9UBQ0 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.48□□□□□ -1.69
VPS29Q9UBQ0 SDR42E1P1-201ENST00000611327 477 ntBASIC4.48□□□□□ -1.69
VPS29Q9UBQ0 AC068870.2-201ENST00000620635 389 ntBASIC4.48□□□□□ -1.69
VPS29Q9UBQ0 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
VPS29Q9UBQ0 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
VPS29Q9UBQ0 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
VPS29Q9UBQ0 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
VPS29Q9UBQ0 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
VPS29Q9UBQ0 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.48□□□□□ -1.69
VPS29Q9UBQ0 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
VPS29Q9UBQ0 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.47□□□□□ -1.69
VPS29Q9UBQ0 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.47□□□□□ -1.69
VPS29Q9UBQ0 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.47□□□□□ -1.69
VPS29Q9UBQ0 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC4.47□□□□□ -1.69
VPS29Q9UBQ0 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
VPS29Q9UBQ0 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
VPS29Q9UBQ0 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.47□□□□□ -1.69
VPS29Q9UBQ0 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
VPS29Q9UBQ0 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
VPS29Q9UBQ0 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
VPS29Q9UBQ0 AC233289.1-201ENST00000403700 508 ntBASIC4.47□□□□□ -1.69
VPS29Q9UBQ0 RN7SKP267-201ENST00000410381 285 ntBASIC4.47□□□□□ -1.69
VPS29Q9UBQ0 VDAC1P9-201ENST00000412766 841 ntBASIC4.47□□□□□ -1.69
VPS29Q9UBQ0 Z68694.1-201ENST00000413929 841 ntBASIC4.47□□□□□ -1.69
VPS29Q9UBQ0 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.47□□□□□ -1.69
VPS29Q9UBQ0 Z74021.1-201ENST00000423610 407 ntBASIC4.47□□□□□ -1.69
VPS29Q9UBQ0 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.47□□□□□ -1.69
VPS29Q9UBQ0 RN7SL515P-201ENST00000463999 297 ntBASIC4.47□□□□□ -1.69
VPS29Q9UBQ0 RPL7AP10-201ENST00000481016 791 ntBASIC4.47□□□□□ -1.69
VPS29Q9UBQ0 AC004453.1-201ENST00000487895 408 ntBASIC4.47□□□□□ -1.69
VPS29Q9UBQ0 RPS4XP14-201ENST00000493072 781 ntBASIC4.47□□□□□ -1.69
VPS29Q9UBQ0 OR5M14P-201ENST00000506803 618 ntBASIC4.47□□□□□ -1.69
VPS29Q9UBQ0 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.47□□□□□ -1.69
VPS29Q9UBQ0 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.47□□□□□ -1.69
VPS29Q9UBQ0 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.47□□□□□ -1.69
VPS29Q9UBQ0 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.47□□□□□ -1.69
VPS29Q9UBQ0 AP001880.2-201ENST00000538233 448 ntBASIC4.47□□□□□ -1.69
VPS29Q9UBQ0 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.47□□□□□ -1.69
VPS29Q9UBQ0 AC018552.1-201ENST00000562099 811 ntBASIC4.47□□□□□ -1.69
VPS29Q9UBQ0 RN7SL652P-201ENST00000577769 300 ntBASIC4.47□□□□□ -1.69
VPS29Q9UBQ0 HMGB2P1-201ENST00000591146 634 ntBASIC4.47□□□□□ -1.69
VPS29Q9UBQ0 OR7E18P-201ENST00000592589 702 ntBASIC4.47□□□□□ -1.69
VPS29Q9UBQ0 AP000894.4-201ENST00000610185 483 ntBASIC4.47□□□□□ -1.69
VPS29Q9UBQ0 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.47□□□□□ -1.69
VPS29Q9UBQ0 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.47□□□□□ -1.69
VPS29Q9UBQ0 AC245100.2-201ENST00000454544 1679 ntBASIC4.47□□□□□ -1.69
VPS29Q9UBQ0 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
VPS29Q9UBQ0 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
VPS29Q9UBQ0 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
VPS29Q9UBQ0 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.47□□□□□ -1.69
VPS29Q9UBQ0 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
VPS29Q9UBQ0 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
VPS29Q9UBQ0 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
VPS29Q9UBQ0 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.46□□□□□ -1.69
VPS29Q9UBQ0 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
VPS29Q9UBQ0 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
VPS29Q9UBQ0 AC092435.4-201ENST00000623012 4159 ntBASIC4.46□□□□□ -1.7
VPS29Q9UBQ0 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
VPS29Q9UBQ0 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
VPS29Q9UBQ0 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
VPS29Q9UBQ0 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.46□□□□□ -1.7
VPS29Q9UBQ0 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
VPS29Q9UBQ0 RN7SKP149-201ENST00000363008 344 ntBASIC4.46□□□□□ -1.7
VPS29Q9UBQ0 SNORD96B-201ENST00000386148 79 ntBASIC4.46□□□□□ -1.7
VPS29Q9UBQ0 Z98745.1-201ENST00000402553 494 ntBASIC4.46□□□□□ -1.7
VPS29Q9UBQ0 RNA5SP113-201ENST00000410486 84 ntBASIC4.46□□□□□ -1.7
VPS29Q9UBQ0 RSU1P3-201ENST00000412878 835 ntBASIC4.46□□□□□ -1.7
VPS29Q9UBQ0 PTP4A1P1-201ENST00000420539 515 ntBASIC4.46□□□□□ -1.7
VPS29Q9UBQ0 RPL21P43-201ENST00000425440 472 ntBASIC4.46□□□□□ -1.7
VPS29Q9UBQ0 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.46□□□□□ -1.7
VPS29Q9UBQ0 CYCSP11-201ENST00000436426 315 ntBASIC4.46□□□□□ -1.7
VPS29Q9UBQ0 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.46□□□□□ -1.7
VPS29Q9UBQ0 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.46□□□□□ -1.7
VPS29Q9UBQ0 AC002553.2-201ENST00000453217 340 ntBASIC4.46□□□□□ -1.7
VPS29Q9UBQ0 AC074386.1-201ENST00000476560 767 ntBASIC4.46□□□□□ -1.7
VPS29Q9UBQ0 OR9N1P-201ENST00000491296 333 ntBASIC4.46□□□□□ -1.7
VPS29Q9UBQ0 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.46□□□□□ -1.7
VPS29Q9UBQ0 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.46□□□□□ -1.7
VPS29Q9UBQ0 AC098799.3-201ENST00000506095 438 ntBASIC4.46□□□□□ -1.7
VPS29Q9UBQ0 RPS27AP18-201ENST00000515536 459 ntBASIC4.46□□□□□ -1.7
VPS29Q9UBQ0 SCARNA21.2-201ENST00000516600 166 ntBASIC4.46□□□□□ -1.7
VPS29Q9UBQ0 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.46□□□□□ -1.7
VPS29Q9UBQ0 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC4.46□□□□□ -1.7
VPS29Q9UBQ0 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC4.46□□□□□ -1.7
VPS29Q9UBQ0 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.46□□□□□ -1.7
VPS29Q9UBQ0 AC009117.1-201ENST00000563948 554 ntBASIC4.46□□□□□ -1.7
VPS29Q9UBQ0 MIR4646-201ENST00000580775 63 ntBASIC4.46□□□□□ -1.7
VPS29Q9UBQ0 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.46□□□□□ -1.7
VPS29Q9UBQ0 AP002884.5-201ENST00000595053 1132 ntBASIC4.46□□□□□ -1.7
VPS29Q9UBQ0 AC140113.4-201ENST00000622087 222 ntBASIC4.46□□□□□ -1.7
VPS29Q9UBQ0 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC4.46□□□□□ -1.7
VPS29Q9UBQ0 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.46□□□□□ -1.7
VPS29Q9UBQ0 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
VPS29Q9UBQ0 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
VPS29Q9UBQ0 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
VPS29Q9UBQ0 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.46□□□□□ -1.7
VPS29Q9UBQ0 RBPJP2-201ENST00000618187 1444 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms