Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 AC104997.1-201ENST00000519761 717 ntBASIC5.04□□□□□ -1.6
SPASTQ9UBP0 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.04□□□□□ -1.6
SPASTQ9UBP0 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.04□□□□□ -1.6
SPASTQ9UBP0 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.04□□□□□ -1.6
SPASTQ9UBP0 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.04□□□□□ -1.6
SPASTQ9UBP0 AC008033.2-201ENST00000542626 177 ntBASIC5.04□□□□□ -1.6
SPASTQ9UBP0 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC5.04□□□□□ -1.6
SPASTQ9UBP0 NMNAT1P1-201ENST00000554095 876 ntBASIC5.04□□□□□ -1.6
SPASTQ9UBP0 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.04□□□□□ -1.6
SPASTQ9UBP0 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.04□□□□□ -1.6
SPASTQ9UBP0 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.04□□□□□ -1.6
SPASTQ9UBP0 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.04□□□□□ -1.6
SPASTQ9UBP0 AP004372.1-201ENST00000604842 844 ntBASIC5.04□□□□□ -1.6
SPASTQ9UBP0 TMEM30CP-203ENST00000637814 1035 ntBASIC5.04□□□□□ -1.6
SPASTQ9UBP0 TCP1P3-201ENST00000414406 1498 ntBASIC5.04□□□□□ -1.6
SPASTQ9UBP0 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.04□□□□□ -1.6
SPASTQ9UBP0 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SPASTQ9UBP0 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
SPASTQ9UBP0 AC004817.4-201ENST00000602396 3625 ntBASIC5.03□□□□□ -1.6
SPASTQ9UBP0 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
SPASTQ9UBP0 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SPASTQ9UBP0 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.03□□□□□ -1.6
SPASTQ9UBP0 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
SPASTQ9UBP0 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SPASTQ9UBP0 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SPASTQ9UBP0 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
SPASTQ9UBP0 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.03□□□□□ -1.6
SPASTQ9UBP0 RN7SKP95-201ENST00000362860 303 ntBASIC5.03□□□□□ -1.6
SPASTQ9UBP0 RN7SKP149-201ENST00000363008 344 ntBASIC5.03□□□□□ -1.6
SPASTQ9UBP0 RN7SKP113-201ENST00000363891 295 ntBASIC5.03□□□□□ -1.6
SPASTQ9UBP0 RNA5SP223-201ENST00000365174 120 ntBASIC5.03□□□□□ -1.6
SPASTQ9UBP0 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SPASTQ9UBP0 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
SPASTQ9UBP0 RPL21P67-201ENST00000402896 478 ntBASIC5.03□□□□□ -1.6
SPASTQ9UBP0 AP002530.1-201ENST00000405705 684 ntBASIC5.03□□□□□ -1.6
SPASTQ9UBP0 SETP15-201ENST00000412724 337 ntBASIC5.03□□□□□ -1.6
SPASTQ9UBP0 OR2AM1P-201ENST00000422137 422 ntBASIC5.03□□□□□ -1.6
SPASTQ9UBP0 AC006065.1-201ENST00000422539 802 ntBASIC5.03□□□□□ -1.6
SPASTQ9UBP0 AL360081.1-201ENST00000428299 555 ntBASIC5.03□□□□□ -1.6
SPASTQ9UBP0 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.03□□□□□ -1.6
SPASTQ9UBP0 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5.03□□□□□ -1.6
SPASTQ9UBP0 AC012512.1-201ENST00000446594 718 ntBASIC5.03□□□□□ -1.6
SPASTQ9UBP0 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.03□□□□□ -1.6
SPASTQ9UBP0 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.03□□□□□ -1.6
SPASTQ9UBP0 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC5.03□□□□□ -1.6
SPASTQ9UBP0 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.03□□□□□ -1.6
SPASTQ9UBP0 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.03□□□□□ -1.6
SPASTQ9UBP0 AC034244.2-201ENST00000514668 858 ntBASIC5.03□□□□□ -1.6
SPASTQ9UBP0 AC067904.2-201ENST00000517322 1283 ntBASIC5.03□□□□□ -1.6
SPASTQ9UBP0 MTCYBP19-201ENST00000517463 1124 ntBASIC5.03□□□□□ -1.6
SPASTQ9UBP0 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.03□□□□□ -1.6
SPASTQ9UBP0 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SPASTQ9UBP0 AC092868.3-201ENST00000560515 784 ntBASIC5.03□□□□□ -1.6
SPASTQ9UBP0 MTATP6P25-201ENST00000574491 261 ntBASIC5.03□□□□□ -1.6
SPASTQ9UBP0 DPRXP4-201ENST00000578053 568 ntBASIC5.03□□□□□ -1.6
SPASTQ9UBP0 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
SPASTQ9UBP0 PRPF19P1-201ENST00000584766 898 ntBASIC5.03□□□□□ -1.6
SPASTQ9UBP0 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5.03□□□□□ -1.6
SPASTQ9UBP0 AC068020.1-201ENST00000594215 661 ntBASIC5.03□□□□□ -1.6
SPASTQ9UBP0 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.03□□□□□ -1.6
SPASTQ9UBP0 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.03□□□□□ -1.6
SPASTQ9UBP0 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.03□□□□□ -1.6
SPASTQ9UBP0 AC130352.1-201ENST00000602979 661 ntBASIC5.03□□□□□ -1.6
SPASTQ9UBP0 AC087783.2-201ENST00000605070 562 ntBASIC5.03□□□□□ -1.6
SPASTQ9UBP0 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.03□□□□□ -1.6
SPASTQ9UBP0 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC5.03□□□□□ -1.6
SPASTQ9UBP0 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.03□□□□□ -1.6
SPASTQ9UBP0 AC119674.1-220ENST00000641502 1048 ntBASIC5.03□□□□□ -1.6
SPASTQ9UBP0 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
SPASTQ9UBP0 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.03□□□□□ -1.6
SPASTQ9UBP0 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
SPASTQ9UBP0 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SPASTQ9UBP0 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SPASTQ9UBP0 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SPASTQ9UBP0 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SPASTQ9UBP0 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
SPASTQ9UBP0 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
SPASTQ9UBP0 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SPASTQ9UBP0 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
SPASTQ9UBP0 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.61
SPASTQ9UBP0 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.02□□□□□ -1.61
SPASTQ9UBP0 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SPASTQ9UBP0 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
SPASTQ9UBP0 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
SPASTQ9UBP0 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.02□□□□□ -1.61
SPASTQ9UBP0 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
SPASTQ9UBP0 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SPASTQ9UBP0 RNA5SP428-201ENST00000365129 132 ntBASIC5.02□□□□□ -1.61
SPASTQ9UBP0 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
SPASTQ9UBP0 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5.02□□□□□ -1.61
SPASTQ9UBP0 CTSL3P-202ENST00000412179 788 ntBASIC5.02□□□□□ -1.61
SPASTQ9UBP0 NPM1P40-201ENST00000412758 733 ntBASIC5.02□□□□□ -1.61
SPASTQ9UBP0 AL590806.1-201ENST00000415818 853 ntBASIC5.02□□□□□ -1.61
SPASTQ9UBP0 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.02□□□□□ -1.61
SPASTQ9UBP0 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.02□□□□□ -1.61
SPASTQ9UBP0 AC007563.3-201ENST00000433233 371 ntBASIC5.02□□□□□ -1.61
SPASTQ9UBP0 NDUFA5P1-201ENST00000433858 341 ntBASIC5.02□□□□□ -1.61
SPASTQ9UBP0 CACYBPP1-201ENST00000438592 684 ntBASIC5.02□□□□□ -1.61
SPASTQ9UBP0 AC243772.1-201ENST00000451620 410 ntBASIC5.02□□□□□ -1.61
SPASTQ9UBP0 RPL10P17-201ENST00000453852 316 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms