Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
PPARGC1AQ9UBK2 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 AC023490.2-201ENST00000359859 470 ntBASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 RN7SKP275-201ENST00000364626 301 ntBASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 CGA-201ENST00000369582 729 ntTSL 5 BASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 AL031577.2-201ENST00000404133 280 ntBASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 AL096800.1-201ENST00000405326 893 ntBASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 RNA5SP498-201ENST00000411342 120 ntBASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 MTCO1P3-201ENST00000429327 192 ntBASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 XACT-201ENST00000468762 497 ntTSL 5 BASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 AC124945.1-201ENST00000485133 188 ntBASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 WBP1LP4-201ENST00000505043 344 ntBASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 AC005178.1-201ENST00000508392 440 ntBASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 HNRNPKP5-201ENST00000515300 253 ntBASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 AC023632.1-201ENST00000518463 375 ntBASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 AL121766.1-201ENST00000547436 487 ntBASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 AC025260.1-201ENST00000548858 430 ntBASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 AC044913.1-201ENST00000557200 430 ntBASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 AC116553.2-201ENST00000564203 463 ntBASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 AL136131.3-201ENST00000607600 188 ntBASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 MIR6809-201ENST00000612189 116 ntBASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 Six3os1_2.1-201ENST00000616963 217 ntBASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 AL136228.1-201ENST00000622221 319 ntBASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 AC092656.1-203ENST00000624134 423 ntBASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 AP003072.4-201ENST00000624580 310 ntBASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 NCLP2-201ENST00000416078 1462 ntBASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 CR381670.1-201ENST00000624291 1693 ntBASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 AC087516.1-201ENST00000561236 2428 ntBASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.19□□□□□ -1.42
PPARGC1AQ9UBK2 MT-RNR2-201ENST00000387347 1559 ntBASIC6.18□□□□□ -1.42
PPARGC1AQ9UBK2 AL121839.2-201ENST00000565058 6943 ntBASIC6.18□□□□□ -1.42
PPARGC1AQ9UBK2 THAP12P9-201ENST00000503971 2360 ntBASIC6.18□□□□□ -1.42
PPARGC1AQ9UBK2 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
PPARGC1AQ9UBK2 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PPARGC1AQ9UBK2 AC003973.3-201ENST00000624863 2822 ntBASIC6.18□□□□□ -1.42
PPARGC1AQ9UBK2 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC6.18□□□□□ -1.42
PPARGC1AQ9UBK2 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC6.18□□□□□ -1.42
PPARGC1AQ9UBK2 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
PPARGC1AQ9UBK2 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PPARGC1AQ9UBK2 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
PPARGC1AQ9UBK2 AC005539.1-201ENST00000443768 1479 ntBASIC6.18□□□□□ -1.42
PPARGC1AQ9UBK2 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PPARGC1AQ9UBK2 AL391994.1-201ENST00000254724 282 ntBASIC6.18□□□□□ -1.42
PPARGC1AQ9UBK2 OR56B2P-201ENST00000317102 954 ntBASIC6.18□□□□□ -1.42
PPARGC1AQ9UBK2 RNU6-931P-201ENST00000363850 107 ntBASIC6.18□□□□□ -1.42
PPARGC1AQ9UBK2 RNU6-707P-201ENST00000364647 95 ntBASIC6.18□□□□□ -1.42
PPARGC1AQ9UBK2 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PPARGC1AQ9UBK2 AC093719.1-202ENST00000392735 373 ntBASIC6.18□□□□□ -1.42
PPARGC1AQ9UBK2 AC004386.1-201ENST00000393214 761 ntBASIC6.18□□□□□ -1.42
PPARGC1AQ9UBK2 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
PPARGC1AQ9UBK2 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
PPARGC1AQ9UBK2 PAICSP7-201ENST00000419829 962 ntBASIC6.18□□□□□ -1.42
PPARGC1AQ9UBK2 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.18□□□□□ -1.42
PPARGC1AQ9UBK2 AL590399.2-201ENST00000427536 309 ntBASIC6.18□□□□□ -1.42
PPARGC1AQ9UBK2 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PPARGC1AQ9UBK2 AC124944.2-201ENST00000429866 1242 ntBASIC6.18□□□□□ -1.42
PPARGC1AQ9UBK2 MTCO1P52-201ENST00000433928 531 ntBASIC6.18□□□□□ -1.42
PPARGC1AQ9UBK2 HMGB3P10-201ENST00000434734 572 ntBASIC6.18□□□□□ -1.42
PPARGC1AQ9UBK2 AC110602.1-201ENST00000437414 318 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms