Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 FAM96AP1-201ENST00000430879 482 ntBASIC6.23□□□□□ -1.41
VTA1Q9NP79 TMEM183AP1-205ENST00000432739 290 ntBASIC6.23□□□□□ -1.41
VTA1Q9NP79 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC6.23□□□□□ -1.41
VTA1Q9NP79 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC6.23□□□□□ -1.41
VTA1Q9NP79 EEF1A1P39-201ENST00000440791 250 ntBASIC6.23□□□□□ -1.41
VTA1Q9NP79 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC6.23□□□□□ -1.41
VTA1Q9NP79 RBMY2TP-201ENST00000451162 947 ntBASIC6.23□□□□□ -1.41
VTA1Q9NP79 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC6.23□□□□□ -1.41
VTA1Q9NP79 AC111193.1-201ENST00000504097 155 ntBASIC6.23□□□□□ -1.41
VTA1Q9NP79 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC6.23□□□□□ -1.41
VTA1Q9NP79 HMGB1P40-201ENST00000525121 540 ntBASIC6.23□□□□□ -1.41
VTA1Q9NP79 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC6.23□□□□□ -1.41
VTA1Q9NP79 CSNK1A1P1-202ENST00000563423 981 ntBASIC6.23□□□□□ -1.41
VTA1Q9NP79 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC6.23□□□□□ -1.41
VTA1Q9NP79 AL445222.1-201ENST00000607259 628 ntBASIC6.23□□□□□ -1.41
VTA1Q9NP79 AC013468.1-201ENST00000608680 598 ntBASIC6.23□□□□□ -1.41
VTA1Q9NP79 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
VTA1Q9NP79 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC6.23□□□□□ -1.41
VTA1Q9NP79 UGP2-231ENST00000627474 264 ntTSL 5 BASIC6.23□□□□□ -1.41
VTA1Q9NP79 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
VTA1Q9NP79 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
VTA1Q9NP79 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.23□□□□□ -1.41
VTA1Q9NP79 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
VTA1Q9NP79 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
VTA1Q9NP79 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
VTA1Q9NP79 HSPD1P8-201ENST00000400121 1658 ntBASIC6.23□□□□□ -1.41
VTA1Q9NP79 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
VTA1Q9NP79 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
VTA1Q9NP79 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
VTA1Q9NP79 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
VTA1Q9NP79 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
VTA1Q9NP79 AC140134.1-201ENST00000511830 3544 ntBASIC6.22□□□□□ -1.41
VTA1Q9NP79 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
VTA1Q9NP79 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.22□□□□□ -1.41
VTA1Q9NP79 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC6.22□□□□□ -1.41
VTA1Q9NP79 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
VTA1Q9NP79 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC6.22□□□□□ -1.41
VTA1Q9NP79 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
VTA1Q9NP79 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
VTA1Q9NP79 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
VTA1Q9NP79 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
VTA1Q9NP79 MTCO1P15-201ENST00000529569 1526 ntBASIC6.22□□□□□ -1.41
VTA1Q9NP79 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
VTA1Q9NP79 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.22□□□□□ -1.41
VTA1Q9NP79 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
VTA1Q9NP79 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
VTA1Q9NP79 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
VTA1Q9NP79 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
VTA1Q9NP79 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
VTA1Q9NP79 RNU4-40P-201ENST00000364351 143 ntBASIC6.22□□□□□ -1.41
VTA1Q9NP79 SNORA67-201ENST00000384423 137 ntBASIC6.22□□□□□ -1.41
VTA1Q9NP79 MIR137-201ENST00000385223 102 ntBASIC6.22□□□□□ -1.41
VTA1Q9NP79 RNU11-201ENST00000387069 134 ntBASIC6.22□□□□□ -1.41
VTA1Q9NP79 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
VTA1Q9NP79 AL035419.1-201ENST00000397037 564 ntBASIC6.22□□□□□ -1.41
VTA1Q9NP79 RN7SKP279-201ENST00000411383 298 ntBASIC6.22□□□□□ -1.41
VTA1Q9NP79 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC6.22□□□□□ -1.41
VTA1Q9NP79 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.22□□□□□ -1.41
VTA1Q9NP79 AC246680.2-201ENST00000422106 389 ntBASIC6.22□□□□□ -1.41
VTA1Q9NP79 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC6.22□□□□□ -1.41
VTA1Q9NP79 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC6.22□□□□□ -1.41
VTA1Q9NP79 AC107015.1-201ENST00000466902 747 ntBASIC6.22□□□□□ -1.41
VTA1Q9NP79 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC6.22□□□□□ -1.41
VTA1Q9NP79 RPL7AP6-201ENST00000477943 801 ntBASIC6.22□□□□□ -1.41
VTA1Q9NP79 ATP5LP5-201ENST00000483050 299 ntBASIC6.22□□□□□ -1.41
VTA1Q9NP79 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
VTA1Q9NP79 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC6.22□□□□□ -1.41
VTA1Q9NP79 AC105313.1-201ENST00000509121 353 ntBASIC6.22□□□□□ -1.41
VTA1Q9NP79 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC6.22□□□□□ -1.41
VTA1Q9NP79 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC6.22□□□□□ -1.41
VTA1Q9NP79 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.22□□□□□ -1.41
VTA1Q9NP79 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC6.22□□□□□ -1.41
VTA1Q9NP79 MTCO2P15-201ENST00000532655 656 ntBASIC6.22□□□□□ -1.41
VTA1Q9NP79 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
VTA1Q9NP79 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC6.22□□□□□ -1.41
VTA1Q9NP79 AC091515.1-201ENST00000548110 679 ntBASIC6.22□□□□□ -1.41
VTA1Q9NP79 AC025260.1-201ENST00000548858 430 ntBASIC6.22□□□□□ -1.41
VTA1Q9NP79 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC6.22□□□□□ -1.41
VTA1Q9NP79 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC6.22□□□□□ -1.41
VTA1Q9NP79 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
VTA1Q9NP79 AL360012.1-201ENST00000602813 131 ntBASIC6.22□□□□□ -1.41
VTA1Q9NP79 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC6.22□□□□□ -1.41
VTA1Q9NP79 AC002069.2-201ENST00000603580 883 ntBASIC6.22□□□□□ -1.41
VTA1Q9NP79 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC6.22□□□□□ -1.41
VTA1Q9NP79 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
VTA1Q9NP79 WWOX-217ENST00000620008 450 ntTSL 2 BASIC6.22□□□□□ -1.41
VTA1Q9NP79 AC024595.1-201ENST00000623088 387 ntBASIC6.22□□□□□ -1.41
VTA1Q9NP79 AC145207.9-201ENST00000623802 325 ntBASIC6.22□□□□□ -1.41
VTA1Q9NP79 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC6.22□□□□□ -1.41
VTA1Q9NP79 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC6.22□□□□□ -1.41
VTA1Q9NP79 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC6.22□□□□□ -1.41
VTA1Q9NP79 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
VTA1Q9NP79 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC6.22□□□□□ -1.41
VTA1Q9NP79 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.22□□□□□ -1.41
VTA1Q9NP79 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.22□□□□□ -1.41
VTA1Q9NP79 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.22□□□□□ -1.41
VTA1Q9NP79 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.41
VTA1Q9NP79 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC6.21□□□□□ -1.41
VTA1Q9NP79 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC6.21□□□□□ -1.41
VTA1Q9NP79 VPS35P1-201ENST00000563400 1518 ntBASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms