Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC5.55□□□□□ -1.52
SEC61A2Q9H9S3 RPS27AP2-201ENST00000457576 465 ntBASIC5.55□□□□□ -1.52
SEC61A2Q9H9S3 AL603882.1-201ENST00000463059 681 ntBASIC5.55□□□□□ -1.52
SEC61A2Q9H9S3 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.55□□□□□ -1.52
SEC61A2Q9H9S3 AC005017.1-201ENST00000482002 490 ntBASIC5.55□□□□□ -1.52
SEC61A2Q9H9S3 CR383656.1-201ENST00000484916 377 ntBASIC5.55□□□□□ -1.52
SEC61A2Q9H9S3 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.55□□□□□ -1.52
SEC61A2Q9H9S3 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC5.55□□□□□ -1.52
SEC61A2Q9H9S3 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.55□□□□□ -1.52
SEC61A2Q9H9S3 RNA5SP441-201ENST00000516809 88 ntBASIC5.55□□□□□ -1.52
SEC61A2Q9H9S3 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.55□□□□□ -1.52
SEC61A2Q9H9S3 IGHV4-55-201ENST00000520889 368 ntBASIC5.55□□□□□ -1.52
SEC61A2Q9H9S3 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.55□□□□□ -1.52
SEC61A2Q9H9S3 CYCSP25-201ENST00000525280 316 ntBASIC5.55□□□□□ -1.52
SEC61A2Q9H9S3 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.55□□□□□ -1.52
SEC61A2Q9H9S3 BCAS2P1-201ENST00000528022 632 ntBASIC5.55□□□□□ -1.52
SEC61A2Q9H9S3 MED28P5-201ENST00000528254 438 ntBASIC5.55□□□□□ -1.52
SEC61A2Q9H9S3 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.55□□□□□ -1.52
SEC61A2Q9H9S3 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.55□□□□□ -1.52
SEC61A2Q9H9S3 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC5.55□□□□□ -1.52
SEC61A2Q9H9S3 AC004825.1-201ENST00000555068 586 ntBASIC5.55□□□□□ -1.52
SEC61A2Q9H9S3 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC5.55□□□□□ -1.52
SEC61A2Q9H9S3 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.55□□□□□ -1.52
SEC61A2Q9H9S3 ANKRD36BP2-206ENST00000575193 1245 ntBASIC5.55□□□□□ -1.52
SEC61A2Q9H9S3 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC5.55□□□□□ -1.52
SEC61A2Q9H9S3 AC068020.1-201ENST00000594215 661 ntBASIC5.55□□□□□ -1.52
SEC61A2Q9H9S3 AC130352.1-201ENST00000602979 661 ntBASIC5.55□□□□□ -1.52
SEC61A2Q9H9S3 RPSAP75-201ENST00000605848 301 ntBASIC5.55□□□□□ -1.52
SEC61A2Q9H9S3 AC090970.3-201ENST00000612566 866 ntBASIC5.55□□□□□ -1.52
SEC61A2Q9H9S3 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.55□□□□□ -1.52
SEC61A2Q9H9S3 AC111152.1-202ENST00000635848 339 ntBASIC5.55□□□□□ -1.52
SEC61A2Q9H9S3 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SEC61A2Q9H9S3 AL136984.1-201ENST00000607611 1893 ntBASIC5.55□□□□□ -1.52
SEC61A2Q9H9S3 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
SEC61A2Q9H9S3 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
SEC61A2Q9H9S3 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SEC61A2Q9H9S3 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
SEC61A2Q9H9S3 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.55□□□□□ -1.52
SEC61A2Q9H9S3 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SEC61A2Q9H9S3 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
SEC61A2Q9H9S3 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SEC61A2Q9H9S3 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SEC61A2Q9H9S3 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 ATP8A2P3-201ENST00000426792 1536 ntBASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 METTL21EP-201ENST00000298105 713 ntBASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 RNU6-761P-201ENST00000384148 107 ntBASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 RNU6-1042P-201ENST00000384204 107 ntBASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 RNU11-201ENST00000387069 134 ntBASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 VN1R12P-201ENST00000403778 876 ntBASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 MIR1275-201ENST00000408770 80 ntBASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 RPS15AP38-201ENST00000413110 372 ntBASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 NME1P1-201ENST00000420914 382 ntBASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 CNOT7P2-201ENST00000441051 832 ntBASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 AC079922.1-201ENST00000443291 359 ntBASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 POU5F1P5-201ENST00000445059 658 ntBASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 MORF4-201ENST00000447135 971 ntBASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 EEF1B2P3-201ENST00000447718 678 ntBASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 AC112484.3-201ENST00000505910 329 ntBASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 AC079395.1-201ENST00000510981 262 ntBASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 AC109445.1-201ENST00000512356 383 ntBASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 RNU6-1308P-201ENST00000516817 103 ntBASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 AC109635.3-201ENST00000529536 185 ntBASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 AL121579.1-201ENST00000555129 305 ntBASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 OR11J2P-201ENST00000555298 907 ntBASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 AL360012.1-201ENST00000602813 131 ntBASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 AC068276.1-201ENST00000605793 379 ntBASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 322.8 ms