Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
VPS11Q9H270 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
VPS11Q9H270 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.91□□□□□ -1.46
VPS11Q9H270 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
VPS11Q9H270 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.91□□□□□ -1.46
VPS11Q9H270 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
VPS11Q9H270 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.91□□□□□ -1.46
VPS11Q9H270 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
VPS11Q9H270 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
VPS11Q9H270 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.9□□□□□ -1.46
VPS11Q9H270 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.9□□□□□ -1.46
VPS11Q9H270 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.46
VPS11Q9H270 AC006484.1-201ENST00000435086 1884 ntBASIC5.9□□□□□ -1.46
VPS11Q9H270 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.9□□□□□ -1.46
VPS11Q9H270 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
VPS11Q9H270 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
VPS11Q9H270 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
VPS11Q9H270 METTL21EP-201ENST00000298105 713 ntBASIC5.9□□□□□ -1.46
VPS11Q9H270 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
VPS11Q9H270 ANKRD36P1-201ENST00000344424 659 ntBASIC5.9□□□□□ -1.46
VPS11Q9H270 AC023490.2-201ENST00000359859 470 ntBASIC5.9□□□□□ -1.46
VPS11Q9H270 RN7SKP185-201ENST00000362813 326 ntBASIC5.9□□□□□ -1.46
VPS11Q9H270 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.9□□□□□ -1.46
VPS11Q9H270 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.9□□□□□ -1.46
VPS11Q9H270 AL139805.1-201ENST00000407837 289 ntBASIC5.9□□□□□ -1.46
VPS11Q9H270 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC5.9□□□□□ -1.46
VPS11Q9H270 AC099677.3-201ENST00000427081 395 ntBASIC5.9□□□□□ -1.46
VPS11Q9H270 VTI1BP4-201ENST00000427516 527 ntBASIC5.9□□□□□ -1.46
VPS11Q9H270 SCP2-206ENST00000430330 938 ntTSL 2 BASIC5.9□□□□□ -1.46
VPS11Q9H270 AL022324.2-201ENST00000434827 780 ntBASIC5.9□□□□□ -1.46
VPS11Q9H270 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.9□□□□□ -1.46
VPS11Q9H270 AL663074.2-201ENST00000440621 479 ntBASIC5.9□□□□□ -1.46
VPS11Q9H270 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.9□□□□□ -1.46
VPS11Q9H270 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC5.9□□□□□ -1.46
VPS11Q9H270 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC5.9□□□□□ -1.46
VPS11Q9H270 AC023271.1-201ENST00000445936 1090 ntBASIC5.9□□□□□ -1.46
VPS11Q9H270 AC009961.3-201ENST00000449832 765 ntBASIC5.9□□□□□ -1.46
VPS11Q9H270 AC002553.3-201ENST00000453002 341 ntBASIC5.9□□□□□ -1.46
VPS11Q9H270 AC027673.1-201ENST00000456245 405 ntBASIC5.9□□□□□ -1.46
VPS11Q9H270 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.9□□□□□ -1.46
VPS11Q9H270 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.9□□□□□ -1.46
VPS11Q9H270 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
VPS11Q9H270 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.9□□□□□ -1.46
VPS11Q9H270 RPL38P3-201ENST00000484463 213 ntBASIC5.9□□□□□ -1.46
VPS11Q9H270 AC010374.1-201ENST00000503762 1237 ntBASIC5.9□□□□□ -1.46
VPS11Q9H270 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.9□□□□□ -1.46
VPS11Q9H270 AC093752.1-206ENST00000511823 336 ntBASIC5.9□□□□□ -1.46
VPS11Q9H270 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.9□□□□□ -1.46
VPS11Q9H270 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC5.9□□□□□ -1.46
VPS11Q9H270 HMGB1P42-201ENST00000532126 553 ntBASIC5.9□□□□□ -1.46
VPS11Q9H270 NPIPB14P-203ENST00000532298 987 ntBASIC5.9□□□□□ -1.46
VPS11Q9H270 MTCO3P24-201ENST00000572729 782 ntBASIC5.9□□□□□ -1.46
VPS11Q9H270 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
VPS11Q9H270 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.9□□□□□ -1.46
VPS11Q9H270 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.9□□□□□ -1.46
VPS11Q9H270 AL590229.1-201ENST00000603497 542 ntBASIC5.9□□□□□ -1.46
VPS11Q9H270 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.9□□□□□ -1.46
VPS11Q9H270 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.9□□□□□ -1.46
VPS11Q9H270 RN7SKP299-201ENST00000606679 301 ntBASIC5.9□□□□□ -1.46
VPS11Q9H270 AL139286.2-201ENST00000606838 396 ntBASIC5.9□□□□□ -1.46
VPS11Q9H270 AL022394.1-201ENST00000606979 292 ntBASIC5.9□□□□□ -1.46
VPS11Q9H270 AC116651.1-201ENST00000609724 556 ntBASIC5.9□□□□□ -1.46
VPS11Q9H270 Z95327.3-201ENST00000610385 572 ntBASIC5.9□□□□□ -1.46
VPS11Q9H270 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC5.9□□□□□ -1.46
VPS11Q9H270 AC092656.1-203ENST00000624134 423 ntBASIC5.9□□□□□ -1.46
VPS11Q9H270 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
VPS11Q9H270 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
VPS11Q9H270 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
VPS11Q9H270 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
VPS11Q9H270 MTND4P23-201ENST00000447723 1363 ntBASIC5.9□□□□□ -1.47
VPS11Q9H270 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.9□□□□□ -1.47
VPS11Q9H270 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
VPS11Q9H270 MTCO1P18-201ENST00000455518 1419 ntBASIC5.9□□□□□ -1.47
VPS11Q9H270 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.9□□□□□ -1.47
VPS11Q9H270 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC5.9□□□□□ -1.47
VPS11Q9H270 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.9□□□□□ -1.47
VPS11Q9H270 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
VPS11Q9H270 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.47
VPS11Q9H270 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
VPS11Q9H270 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
VPS11Q9H270 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.89□□□□□ -1.47
VPS11Q9H270 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VPS11Q9H270 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VPS11Q9H270 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.89□□□□□ -1.47
VPS11Q9H270 LINC01613-201ENST00000561476 2780 ntBASIC5.89□□□□□ -1.47
VPS11Q9H270 SNORA21-201ENST00000362423 132 ntBASIC5.89□□□□□ -1.47
VPS11Q9H270 SNORD113-6-201ENST00000363345 75 ntBASIC5.89□□□□□ -1.47
VPS11Q9H270 RNU4-68P-201ENST00000364314 141 ntBASIC5.89□□□□□ -1.47
VPS11Q9H270 RNU4-4P-201ENST00000364588 130 ntBASIC5.89□□□□□ -1.47
VPS11Q9H270 RNU6-207P-201ENST00000384137 107 ntBASIC5.89□□□□□ -1.47
VPS11Q9H270 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC5.89□□□□□ -1.47
VPS11Q9H270 RNU6ATAC25P-201ENST00000408798 117 ntBASIC5.89□□□□□ -1.47
VPS11Q9H270 TEX41-202ENST00000414256 604 ntTSL 5 BASIC5.89□□□□□ -1.47
VPS11Q9H270 UBE2V1P9-201ENST00000414760 368 ntBASIC5.89□□□□□ -1.47
VPS11Q9H270 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC5.89□□□□□ -1.47
VPS11Q9H270 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.89□□□□□ -1.47
VPS11Q9H270 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.89□□□□□ -1.47
VPS11Q9H270 AC011233.1-201ENST00000422812 283 ntBASIC5.89□□□□□ -1.47
VPS11Q9H270 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.89□□□□□ -1.47
VPS11Q9H270 DEFB130D-201ENST00000426866 237 ntBASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms