Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.7□□□□□ -1.5
UPF3BQ9BZI7 AL451139.1-201ENST00000434718 346 ntBASIC5.7□□□□□ -1.5
UPF3BQ9BZI7 AL031584.1-201ENST00000447169 754 ntBASIC5.7□□□□□ -1.5
UPF3BQ9BZI7 AC010733.1-201ENST00000451515 401 ntBASIC5.7□□□□□ -1.5
UPF3BQ9BZI7 SEPT7P3-201ENST00000455017 621 ntBASIC5.7□□□□□ -1.5
UPF3BQ9BZI7 NDUFA12P1-201ENST00000455914 406 ntBASIC5.7□□□□□ -1.5
UPF3BQ9BZI7 AC108751.2-201ENST00000469993 231 ntBASIC5.7□□□□□ -1.5
UPF3BQ9BZI7 RN7SL459P-201ENST00000481078 302 ntBASIC5.7□□□□□ -1.5
UPF3BQ9BZI7 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC5.7□□□□□ -1.5
UPF3BQ9BZI7 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.7□□□□□ -1.5
UPF3BQ9BZI7 PARP1P2-201ENST00000556806 195 ntBASIC5.7□□□□□ -1.5
UPF3BQ9BZI7 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.7□□□□□ -1.5
UPF3BQ9BZI7 MIR4284-201ENST00000578924 81 ntBASIC5.7□□□□□ -1.5
UPF3BQ9BZI7 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.7□□□□□ -1.5
UPF3BQ9BZI7 AL121932.1-201ENST00000605542 214 ntBASIC5.7□□□□□ -1.5
UPF3BQ9BZI7 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.7□□□□□ -1.5
UPF3BQ9BZI7 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
UPF3BQ9BZI7 AL133268.1-201ENST00000405676 1401 ntBASIC5.7□□□□□ -1.5
UPF3BQ9BZI7 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
UPF3BQ9BZI7 AL445487.1-201ENST00000415694 1580 ntBASIC5.7□□□□□ -1.5
UPF3BQ9BZI7 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
UPF3BQ9BZI7 AP000542.2-201ENST00000623199 6179 ntBASIC5.7□□□□□ -1.5
UPF3BQ9BZI7 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
UPF3BQ9BZI7 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.69□□□□□ -1.5
UPF3BQ9BZI7 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
UPF3BQ9BZI7 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
UPF3BQ9BZI7 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
UPF3BQ9BZI7 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
UPF3BQ9BZI7 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
UPF3BQ9BZI7 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
UPF3BQ9BZI7 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.69□□□□□ -1.5
UPF3BQ9BZI7 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5.69□□□□□ -1.5
UPF3BQ9BZI7 U3.30-201ENST00000391308 210 ntBASIC5.69□□□□□ -1.5
UPF3BQ9BZI7 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
UPF3BQ9BZI7 AL359643.1-201ENST00000404109 423 ntBASIC5.69□□□□□ -1.5
UPF3BQ9BZI7 COX6B1P1-201ENST00000415962 213 ntBASIC5.69□□□□□ -1.5
UPF3BQ9BZI7 CHEK2P3-201ENST00000416118 248 ntBASIC5.69□□□□□ -1.5
UPF3BQ9BZI7 RPL7P57-201ENST00000423238 740 ntBASIC5.69□□□□□ -1.5
UPF3BQ9BZI7 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.69□□□□□ -1.5
UPF3BQ9BZI7 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.69□□□□□ -1.5
UPF3BQ9BZI7 NMNAT1P2-201ENST00000435192 860 ntBASIC5.69□□□□□ -1.5
UPF3BQ9BZI7 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.69□□□□□ -1.5
UPF3BQ9BZI7 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5.69□□□□□ -1.5
UPF3BQ9BZI7 AC112206.1-201ENST00000468416 477 ntBASIC5.69□□□□□ -1.5
UPF3BQ9BZI7 RPL7P16-201ENST00000479738 738 ntBASIC5.69□□□□□ -1.5
UPF3BQ9BZI7 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.69□□□□□ -1.5
UPF3BQ9BZI7 C1GALT1P3-201ENST00000522049 819 ntBASIC5.69□□□□□ -1.5
UPF3BQ9BZI7 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.69□□□□□ -1.5
UPF3BQ9BZI7 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.69□□□□□ -1.5
UPF3BQ9BZI7 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.69□□□□□ -1.5
UPF3BQ9BZI7 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.69□□□□□ -1.5
UPF3BQ9BZI7 AP005262.1-201ENST00000582646 997 ntBASIC5.69□□□□□ -1.5
UPF3BQ9BZI7 AC007497.1-201ENST00000610421 561 ntBASIC5.69□□□□□ -1.5
UPF3BQ9BZI7 BNIP3P41-202ENST00000616656 861 ntBASIC5.69□□□□□ -1.5
UPF3BQ9BZI7 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
UPF3BQ9BZI7 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
UPF3BQ9BZI7 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
UPF3BQ9BZI7 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
UPF3BQ9BZI7 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
UPF3BQ9BZI7 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
UPF3BQ9BZI7 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
UPF3BQ9BZI7 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
UPF3BQ9BZI7 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
UPF3BQ9BZI7 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.68□□□□□ -1.5
UPF3BQ9BZI7 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.68□□□□□ -1.5
UPF3BQ9BZI7 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
UPF3BQ9BZI7 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
UPF3BQ9BZI7 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.68□□□□□ -1.5
UPF3BQ9BZI7 RN7SKP104-201ENST00000362605 328 ntBASIC5.68□□□□□ -1.5
UPF3BQ9BZI7 RN7SKP149-201ENST00000363008 344 ntBASIC5.68□□□□□ -1.5
UPF3BQ9BZI7 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.68□□□□□ -1.5
UPF3BQ9BZI7 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
UPF3BQ9BZI7 RNU2-50P-201ENST00000410494 143 ntBASIC5.68□□□□□ -1.5
UPF3BQ9BZI7 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.68□□□□□ -1.5
UPF3BQ9BZI7 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC5.68□□□□□ -1.5
UPF3BQ9BZI7 VN1R37P-201ENST00000419096 748 ntBASIC5.68□□□□□ -1.5
UPF3BQ9BZI7 LINC00993-201ENST00000420453 540 ntBASIC5.68□□□□□ -1.5
UPF3BQ9BZI7 TRY2P-201ENST00000448860 689 ntBASIC5.68□□□□□ -1.5
UPF3BQ9BZI7 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.68□□□□□ -1.5
UPF3BQ9BZI7 OR11I1P-201ENST00000486033 954 ntBASIC5.68□□□□□ -1.5
UPF3BQ9BZI7 AC008897.1-201ENST00000494006 347 ntBASIC5.68□□□□□ -1.5
UPF3BQ9BZI7 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.68□□□□□ -1.5
UPF3BQ9BZI7 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.68□□□□□ -1.5
UPF3BQ9BZI7 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
UPF3BQ9BZI7 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.68□□□□□ -1.5
UPF3BQ9BZI7 MIR4270-201ENST00000581799 70 ntBASIC5.68□□□□□ -1.5
UPF3BQ9BZI7 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.68□□□□□ -1.5
UPF3BQ9BZI7 AC008745.1-201ENST00000604064 271 ntBASIC5.68□□□□□ -1.5
UPF3BQ9BZI7 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.68□□□□□ -1.5
UPF3BQ9BZI7 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
UPF3BQ9BZI7 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
UPF3BQ9BZI7 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.68□□□□□ -1.5
UPF3BQ9BZI7 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
UPF3BQ9BZI7 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
UPF3BQ9BZI7 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.68□□□□□ -1.5
UPF3BQ9BZI7 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
UPF3BQ9BZI7 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
UPF3BQ9BZI7 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
UPF3BQ9BZI7 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.67□□□□□ -1.5
UPF3BQ9BZI7 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms