Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.34□□□□□ -1.72
RSPO3Q9BXY4 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.34□□□□□ -1.72
RSPO3Q9BXY4 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
RSPO3Q9BXY4 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
RSPO3Q9BXY4 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
RSPO3Q9BXY4 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RSPO3Q9BXY4 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RSPO3Q9BXY4 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
RSPO3Q9BXY4 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RSPO3Q9BXY4 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RSPO3Q9BXY4 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RSPO3Q9BXY4 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.33□□□□□ -1.72
RSPO3Q9BXY4 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RSPO3Q9BXY4 INTS6P1-201ENST00000504674 2530 ntBASIC4.33□□□□□ -1.72
RSPO3Q9BXY4 AL606537.1-201ENST00000607258 2011 ntBASIC4.33□□□□□ -1.72
RSPO3Q9BXY4 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RSPO3Q9BXY4 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
RSPO3Q9BXY4 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RSPO3Q9BXY4 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
RSPO3Q9BXY4 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.33□□□□□ -1.72
RSPO3Q9BXY4 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
RSPO3Q9BXY4 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
RSPO3Q9BXY4 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RSPO3Q9BXY4 BMS1P3-201ENST00000372011 932 ntBASIC4.33□□□□□ -1.72
RSPO3Q9BXY4 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
RSPO3Q9BXY4 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
RSPO3Q9BXY4 AL109941.1-201ENST00000401925 229 ntBASIC4.33□□□□□ -1.72
RSPO3Q9BXY4 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.33□□□□□ -1.72
RSPO3Q9BXY4 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.33□□□□□ -1.72
RSPO3Q9BXY4 ELOCP3-201ENST00000439303 348 ntBASIC4.33□□□□□ -1.72
RSPO3Q9BXY4 OR52J1P-201ENST00000450596 932 ntBASIC4.33□□□□□ -1.72
RSPO3Q9BXY4 snoU13.20-201ENST00000459180 104 ntBASIC4.33□□□□□ -1.72
RSPO3Q9BXY4 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
RSPO3Q9BXY4 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.33□□□□□ -1.72
RSPO3Q9BXY4 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.33□□□□□ -1.72
RSPO3Q9BXY4 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.33□□□□□ -1.72
RSPO3Q9BXY4 RPS27AP18-201ENST00000515536 459 ntBASIC4.33□□□□□ -1.72
RSPO3Q9BXY4 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.33□□□□□ -1.72
RSPO3Q9BXY4 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.33□□□□□ -1.72
RSPO3Q9BXY4 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.33□□□□□ -1.72
RSPO3Q9BXY4 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.33□□□□□ -1.72
RSPO3Q9BXY4 AC133644.2-201ENST00000608142 540 ntBASIC4.33□□□□□ -1.72
RSPO3Q9BXY4 SNORD91B-202ENST00000608459 222 ntBASIC4.33□□□□□ -1.72
RSPO3Q9BXY4 FAM27B-201ENST00000610601 213 ntBASIC4.33□□□□□ -1.72
RSPO3Q9BXY4 AL121890.2-201ENST00000617644 465 ntBASIC4.33□□□□□ -1.72
RSPO3Q9BXY4 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.33□□□□□ -1.72
RSPO3Q9BXY4 AP001784.1-201ENST00000624107 428 ntBASIC4.33□□□□□ -1.72
RSPO3Q9BXY4 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.33□□□□□ -1.72
RSPO3Q9BXY4 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.33□□□□□ -1.72
RSPO3Q9BXY4 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
RSPO3Q9BXY4 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.33□□□□□ -1.72
RSPO3Q9BXY4 SCARNA15-201ENST00000607520 4325 ntBASIC4.33□□□□□ -1.72
RSPO3Q9BXY4 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.33□□□□□ -1.72
RSPO3Q9BXY4 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RSPO3Q9BXY4 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.33□□□□□ -1.72
RSPO3Q9BXY4 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
RSPO3Q9BXY4 AC022893.2-201ENST00000564832 3296 ntBASIC4.33□□□□□ -1.72
RSPO3Q9BXY4 AL442639.1-201ENST00000625030 1899 ntBASIC4.32□□□□□ -1.72
RSPO3Q9BXY4 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.32□□□□□ -1.72
RSPO3Q9BXY4 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
RSPO3Q9BXY4 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
RSPO3Q9BXY4 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.32□□□□□ -1.72
RSPO3Q9BXY4 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RSPO3Q9BXY4 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
RSPO3Q9BXY4 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RSPO3Q9BXY4 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
RSPO3Q9BXY4 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RSPO3Q9BXY4 SNORA51.8-201ENST00000384234 132 ntBASIC4.32□□□□□ -1.72
RSPO3Q9BXY4 AC114755.2-201ENST00000413520 361 ntBASIC4.32□□□□□ -1.72
RSPO3Q9BXY4 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC4.32□□□□□ -1.72
RSPO3Q9BXY4 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.32□□□□□ -1.72
RSPO3Q9BXY4 RPL21P43-201ENST00000425440 472 ntBASIC4.32□□□□□ -1.72
RSPO3Q9BXY4 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.32□□□□□ -1.72
RSPO3Q9BXY4 AC073648.4-201ENST00000442655 781 ntBASIC4.32□□□□□ -1.72
RSPO3Q9BXY4 RPL36AP15-201ENST00000444514 266 ntBASIC4.32□□□□□ -1.72
RSPO3Q9BXY4 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.32□□□□□ -1.72
RSPO3Q9BXY4 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.32□□□□□ -1.72
RSPO3Q9BXY4 AP000942.1-201ENST00000463969 747 ntBASIC4.32□□□□□ -1.72
RSPO3Q9BXY4 RN7SL817P-201ENST00000480777 288 ntBASIC4.32□□□□□ -1.72
RSPO3Q9BXY4 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.32□□□□□ -1.72
RSPO3Q9BXY4 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.32□□□□□ -1.72
RSPO3Q9BXY4 OR51K1P-201ENST00000510214 950 ntBASIC4.32□□□□□ -1.72
RSPO3Q9BXY4 LDHBP3-201ENST00000514909 822 ntBASIC4.32□□□□□ -1.72
RSPO3Q9BXY4 RN7SKP46-201ENST00000515942 234 ntBASIC4.32□□□□□ -1.72
RSPO3Q9BXY4 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.32□□□□□ -1.72
RSPO3Q9BXY4 AP001922.4-201ENST00000526967 290 ntBASIC4.32□□□□□ -1.72
RSPO3Q9BXY4 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RSPO3Q9BXY4 AC008126.1-201ENST00000549019 480 ntBASIC4.32□□□□□ -1.72
RSPO3Q9BXY4 CR383656.6-201ENST00000550518 394 ntBASIC4.32□□□□□ -1.72
RSPO3Q9BXY4 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.32□□□□□ -1.72
RSPO3Q9BXY4 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC4.32□□□□□ -1.72
RSPO3Q9BXY4 AC090510.2-201ENST00000617465 629 ntBASIC4.32□□□□□ -1.72
RSPO3Q9BXY4 AC091905.4-201ENST00000623432 202 ntBASIC4.32□□□□□ -1.72
RSPO3Q9BXY4 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.32□□□□□ -1.72
RSPO3Q9BXY4 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.32□□□□□ -1.72
RSPO3Q9BXY4 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
RSPO3Q9BXY4 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RSPO3Q9BXY4 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RSPO3Q9BXY4 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RSPO3Q9BXY4 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms