Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 AL691477.1-201ENST00000624398 162 ntBASIC4.78□□□□□ -1.64
PTP4A1Q93096 CFTRP2-201ENST00000634304 199 ntBASIC4.78□□□□□ -1.64
PTP4A1Q93096 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC4.78□□□□□ -1.64
PTP4A1Q93096 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
PTP4A1Q93096 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
PTP4A1Q93096 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
PTP4A1Q93096 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
PTP4A1Q93096 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.78□□□□□ -1.64
PTP4A1Q93096 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PTP4A1Q93096 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PTP4A1Q93096 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
PTP4A1Q93096 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PTP4A1Q93096 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PTP4A1Q93096 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PTP4A1Q93096 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.78□□□□□ -1.64
PTP4A1Q93096 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.78□□□□□ -1.64
PTP4A1Q93096 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.78□□□□□ -1.65
PTP4A1Q93096 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PTP4A1Q93096 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.77□□□□□ -1.65
PTP4A1Q93096 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
PTP4A1Q93096 AL353743.4-201ENST00000422653 1547 ntBASIC4.77□□□□□ -1.65
PTP4A1Q93096 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
PTP4A1Q93096 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
PTP4A1Q93096 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
PTP4A1Q93096 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC4.77□□□□□ -1.65
PTP4A1Q93096 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PTP4A1Q93096 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
PTP4A1Q93096 OR6E1P-201ENST00000414424 923 ntBASIC4.77□□□□□ -1.65
PTP4A1Q93096 LINC01347-201ENST00000417964 355 ntBASIC4.77□□□□□ -1.65
PTP4A1Q93096 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.77□□□□□ -1.65
PTP4A1Q93096 SRSF1P1-201ENST00000424058 520 ntBASIC4.77□□□□□ -1.65
PTP4A1Q93096 AL138785.1-201ENST00000425821 331 ntBASIC4.77□□□□□ -1.65
PTP4A1Q93096 NANOGP4-201ENST00000427230 913 ntBASIC4.77□□□□□ -1.65
PTP4A1Q93096 RPS29P14-201ENST00000431518 171 ntBASIC4.77□□□□□ -1.65
PTP4A1Q93096 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.77□□□□□ -1.65
PTP4A1Q93096 BTBD7P2-201ENST00000441962 620 ntBASIC4.77□□□□□ -1.65
PTP4A1Q93096 AC022795.1-201ENST00000473808 480 ntBASIC4.77□□□□□ -1.65
PTP4A1Q93096 RPL7P41-201ENST00000485823 957 ntBASIC4.77□□□□□ -1.65
PTP4A1Q93096 RN7SL814P-201ENST00000487715 300 ntBASIC4.77□□□□□ -1.65
PTP4A1Q93096 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC4.77□□□□□ -1.65
PTP4A1Q93096 NIFKP7-201ENST00000503365 834 ntBASIC4.77□□□□□ -1.65
PTP4A1Q93096 HMGB1P44-201ENST00000508597 572 ntBASIC4.77□□□□□ -1.65
PTP4A1Q93096 SETP12-201ENST00000514068 805 ntBASIC4.77□□□□□ -1.65
PTP4A1Q93096 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.77□□□□□ -1.65
PTP4A1Q93096 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.77□□□□□ -1.65
PTP4A1Q93096 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC4.77□□□□□ -1.65
PTP4A1Q93096 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.77□□□□□ -1.65
PTP4A1Q93096 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.77□□□□□ -1.65
PTP4A1Q93096 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PTP4A1Q93096 MTND4LP24-201ENST00000572277 291 ntBASIC4.77□□□□□ -1.65
PTP4A1Q93096 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
PTP4A1Q93096 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC4.77□□□□□ -1.65
PTP4A1Q93096 AC011626.1-201ENST00000604710 562 ntBASIC4.77□□□□□ -1.65
PTP4A1Q93096 AC126175.1-201ENST00000617041 758 ntBASIC4.77□□□□□ -1.65
PTP4A1Q93096 AC026124.2-201ENST00000621847 656 ntBASIC4.77□□□□□ -1.65
PTP4A1Q93096 AC132068.1-201ENST00000623805 459 ntBASIC4.77□□□□□ -1.65
PTP4A1Q93096 AP003072.4-201ENST00000624580 310 ntBASIC4.77□□□□□ -1.65
PTP4A1Q93096 HPVC1-201ENST00000629899 1198 ntBASIC4.77□□□□□ -1.65
PTP4A1Q93096 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
PTP4A1Q93096 AL133268.1-201ENST00000405676 1401 ntBASIC4.77□□□□□ -1.65
PTP4A1Q93096 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PTP4A1Q93096 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PTP4A1Q93096 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PTP4A1Q93096 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
PTP4A1Q93096 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
PTP4A1Q93096 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.77□□□□□ -1.65
PTP4A1Q93096 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.77□□□□□ -1.65
PTP4A1Q93096 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PTP4A1Q93096 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
PTP4A1Q93096 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PTP4A1Q93096 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PTP4A1Q93096 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PTP4A1Q93096 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PTP4A1Q93096 CD86-204ENST00000469710 1604 ntTSL 2 BASIC4.76□□□□□ -1.65
PTP4A1Q93096 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.76□□□□□ -1.65
PTP4A1Q93096 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.76□□□□□ -1.65
PTP4A1Q93096 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PTP4A1Q93096 AC005294.1-201ENST00000355509 281 ntBASIC4.76□□□□□ -1.65
PTP4A1Q93096 RN7SKP153-201ENST00000365026 316 ntBASIC4.76□□□□□ -1.65
PTP4A1Q93096 UBE2V1P15-201ENST00000407776 448 ntBASIC4.76□□□□□ -1.65
PTP4A1Q93096 RNA5SP178-201ENST00000410380 128 ntBASIC4.76□□□□□ -1.65
PTP4A1Q93096 RN7SKP293-201ENST00000411389 296 ntBASIC4.76□□□□□ -1.65
PTP4A1Q93096 PCNPP4-201ENST00000414817 517 ntBASIC4.76□□□□□ -1.65
PTP4A1Q93096 AL596448.1-201ENST00000415024 392 ntBASIC4.76□□□□□ -1.65
PTP4A1Q93096 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.76□□□□□ -1.65
PTP4A1Q93096 AC104843.2-201ENST00000427666 297 ntBASIC4.76□□□□□ -1.65
PTP4A1Q93096 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.76□□□□□ -1.65
PTP4A1Q93096 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.76□□□□□ -1.65
PTP4A1Q93096 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.76□□□□□ -1.65
PTP4A1Q93096 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC4.76□□□□□ -1.65
PTP4A1Q93096 AC090018.1-201ENST00000434369 367 ntBASIC4.76□□□□□ -1.65
PTP4A1Q93096 FMO7P-201ENST00000436045 768 ntBASIC4.76□□□□□ -1.65
PTP4A1Q93096 RPL7P29-201ENST00000437151 728 ntBASIC4.76□□□□□ -1.65
PTP4A1Q93096 MTCO3P43-201ENST00000440974 771 ntBASIC4.76□□□□□ -1.65
PTP4A1Q93096 AL645937.3-201ENST00000453647 936 ntBASIC4.76□□□□□ -1.65
PTP4A1Q93096 MTND2P6-201ENST00000455337 1030 ntBASIC4.76□□□□□ -1.65
PTP4A1Q93096 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.76□□□□□ -1.65
PTP4A1Q93096 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC4.76□□□□□ -1.65
PTP4A1Q93096 SCARNA16.4-201ENST00000516956 187 ntBASIC4.76□□□□□ -1.65
PTP4A1Q93096 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms