Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
TOPBP1Q92547 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC7.61□□□□□ -1.19
TOPBP1Q92547 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC7.61□□□□□ -1.19
TOPBP1Q92547 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
TOPBP1Q92547 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
TOPBP1Q92547 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
TOPBP1Q92547 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
TOPBP1Q92547 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
TOPBP1Q92547 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
TOPBP1Q92547 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
TOPBP1Q92547 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC7.61□□□□□ -1.19
TOPBP1Q92547 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC7.61□□□□□ -1.19
TOPBP1Q92547 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
TOPBP1Q92547 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
TOPBP1Q92547 UBBP2-201ENST00000376781 231 ntBASIC7.61□□□□□ -1.19
TOPBP1Q92547 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC7.61□□□□□ -1.19
TOPBP1Q92547 OR52E3P-201ENST00000452083 936 ntBASIC7.61□□□□□ -1.19
TOPBP1Q92547 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC7.61□□□□□ -1.19
TOPBP1Q92547 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC7.61□□□□□ -1.19
TOPBP1Q92547 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC7.61□□□□□ -1.19
TOPBP1Q92547 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC7.61□□□□□ -1.19
TOPBP1Q92547 AL352984.2-202ENST00000613699 155 ntBASIC7.61□□□□□ -1.19
TOPBP1Q92547 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
TOPBP1Q92547 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC7.61□□□□□ -1.19
TOPBP1Q92547 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC7.6□□□□□ -1.19
TOPBP1Q92547 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC7.6□□□□□ -1.19
TOPBP1Q92547 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC7.6□□□□□ -1.19
TOPBP1Q92547 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
TOPBP1Q92547 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
TOPBP1Q92547 CCL7-202ENST00000394627 696 ntTSL 3 BASIC7.6□□□□□ -1.19
TOPBP1Q92547 RNU4-64P-201ENST00000410795 131 ntBASIC7.6□□□□□ -1.19
TOPBP1Q92547 NPM1P26-201ENST00000426339 738 ntBASIC7.6□□□□□ -1.19
TOPBP1Q92547 RPL37P1-201ENST00000432310 284 ntBASIC7.6□□□□□ -1.19
TOPBP1Q92547 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC7.6□□□□□ -1.19
TOPBP1Q92547 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC7.6□□□□□ -1.19
TOPBP1Q92547 PRSS3P4-201ENST00000453323 162 ntBASIC7.6□□□□□ -1.19
TOPBP1Q92547 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC7.6□□□□□ -1.19
TOPBP1Q92547 AC005868.1-201ENST00000536421 331 ntBASIC7.6□□□□□ -1.19
TOPBP1Q92547 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC7.6□□□□□ -1.19
TOPBP1Q92547 AL161756.2-201ENST00000604597 246 ntBASIC7.6□□□□□ -1.19
TOPBP1Q92547 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
TOPBP1Q92547 AC104260.2-201ENST00000623551 3497 ntBASIC7.6□□□□□ -1.19
TOPBP1Q92547 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC7.6□□□□□ -1.19
TOPBP1Q92547 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
TOPBP1Q92547 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC7.6□□□□□ -1.19
TOPBP1Q92547 NOL8P1-201ENST00000508336 3529 ntBASIC7.6□□□□□ -1.19
TOPBP1Q92547 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
TOPBP1Q92547 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
TOPBP1Q92547 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
TOPBP1Q92547 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
TOPBP1Q92547 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
TOPBP1Q92547 MED23-203ENST00000368058 4576 ntTSL 5 BASIC7.59□□□□□ -1.19
TOPBP1Q92547 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
TOPBP1Q92547 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
TOPBP1Q92547 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC7.59□□□□□ -1.19
TOPBP1Q92547 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
TOPBP1Q92547 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC7.59□□□□□ -1.19
TOPBP1Q92547 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
TOPBP1Q92547 AL607077.1-201ENST00000401718 499 ntBASIC7.59□□□□□ -1.19
TOPBP1Q92547 COX5BP7-201ENST00000414780 274 ntBASIC7.59□□□□□ -1.19
TOPBP1Q92547 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC7.59□□□□□ -1.19
TOPBP1Q92547 AP001804.2-201ENST00000533932 910 ntBASIC7.59□□□□□ -1.19
TOPBP1Q92547 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC7.59□□□□□ -1.19
TOPBP1Q92547 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC7.59□□□□□ -1.19
TOPBP1Q92547 CCNG2P1-201ENST00000549521 1000 ntBASIC7.59□□□□□ -1.19
TOPBP1Q92547 IGKV2OR2-2-201ENST00000605025 300 ntBASIC7.59□□□□□ -1.19
TOPBP1Q92547 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
TOPBP1Q92547 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC7.59□□□□□ -1.19
TOPBP1Q92547 AL391684.1-202ENST00000641293 1636 ntBASIC7.59□□□□□ -1.19
TOPBP1Q92547 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
TOPBP1Q92547 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC7.59□□□□□ -1.19
TOPBP1Q92547 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
TOPBP1Q92547 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC7.59□□□□□ -1.2
TOPBP1Q92547 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
TOPBP1Q92547 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC7.58□□□□□ -1.2
TOPBP1Q92547 SNORA63.1-201ENST00000362493 131 ntBASIC7.58□□□□□ -1.2
TOPBP1Q92547 AL136231.1-201ENST00000429407 730 ntBASIC7.58□□□□□ -1.2
TOPBP1Q92547 GCA-203ENST00000429691 824 ntTSL 3 BASIC7.58□□□□□ -1.2
TOPBP1Q92547 AL445584.1-201ENST00000431451 330 ntBASIC7.58□□□□□ -1.2
TOPBP1Q92547 AL356276.2-201ENST00000435919 558 ntBASIC7.58□□□□□ -1.2
TOPBP1Q92547 RPS29P7-201ENST00000439662 171 ntBASIC7.58□□□□□ -1.2
TOPBP1Q92547 AC146944.2-203ENST00000502493 354 ntBASIC7.58□□□□□ -1.2
TOPBP1Q92547 AC139495.1-202ENST00000513164 354 ntBASIC7.58□□□□□ -1.2
TOPBP1Q92547 IGKV2-23-201ENST00000518729 323 ntBASIC7.58□□□□□ -1.2
TOPBP1Q92547 FCF1-203ENST00000553615 954 ntTSL 3 BASIC7.58□□□□□ -1.2
TOPBP1Q92547 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC7.58□□□□□ -1.2
TOPBP1Q92547 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC7.58□□□□□ -1.2
TOPBP1Q92547 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
TOPBP1Q92547 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
TOPBP1Q92547 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
TOPBP1Q92547 AC007620.2-201ENST00000600539 1697 ntTSL 5 BASIC7.58□□□□□ -1.2
TOPBP1Q92547 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC7.58□□□□□ -1.2
TOPBP1Q92547 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
TOPBP1Q92547 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
TOPBP1Q92547 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC7.58□□□□□ -1.2
TOPBP1Q92547 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
TOPBP1Q92547 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
TOPBP1Q92547 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
TOPBP1Q92547 NPM1P41-201ENST00000512920 831 ntBASIC7.57□□□□□ -1.2
TOPBP1Q92547 MIR6875-201ENST00000617506 72 ntBASIC7.57□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 519.3 ms