Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.2□□□□□ -1.58
LMO3Q8TAP4 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LMO3Q8TAP4 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LMO3Q8TAP4 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.2□□□□□ -1.58
LMO3Q8TAP4 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
LMO3Q8TAP4 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.19□□□□□ -1.58
LMO3Q8TAP4 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.19□□□□□ -1.58
LMO3Q8TAP4 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LMO3Q8TAP4 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LMO3Q8TAP4 AL121839.2-201ENST00000565058 6943 ntBASIC5.19□□□□□ -1.58
LMO3Q8TAP4 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.19□□□□□ -1.58
LMO3Q8TAP4 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LMO3Q8TAP4 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
LMO3Q8TAP4 RNU6-316P-201ENST00000391027 107 ntBASIC5.19□□□□□ -1.58
LMO3Q8TAP4 STAT4-203ENST00000409995 709 ntTSL 5 BASIC5.19□□□□□ -1.58
LMO3Q8TAP4 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.19□□□□□ -1.58
LMO3Q8TAP4 SSR1P2-201ENST00000415208 787 ntBASIC5.19□□□□□ -1.58
LMO3Q8TAP4 RPL12P43-201ENST00000420608 499 ntBASIC5.19□□□□□ -1.58
LMO3Q8TAP4 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.19□□□□□ -1.58
LMO3Q8TAP4 USP12PY-201ENST00000427677 1064 ntBASIC5.19□□□□□ -1.58
LMO3Q8TAP4 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC5.19□□□□□ -1.58
LMO3Q8TAP4 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.19□□□□□ -1.58
LMO3Q8TAP4 RPS17P8-201ENST00000434525 335 ntBASIC5.19□□□□□ -1.58
LMO3Q8TAP4 AL451139.1-201ENST00000434718 346 ntBASIC5.19□□□□□ -1.58
LMO3Q8TAP4 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC5.19□□□□□ -1.58
LMO3Q8TAP4 AC112498.1-201ENST00000444401 332 ntBASIC5.19□□□□□ -1.58
LMO3Q8TAP4 MTATP6P26-201ENST00000445926 662 ntBASIC5.19□□□□□ -1.58
LMO3Q8TAP4 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LMO3Q8TAP4 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LMO3Q8TAP4 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LMO3Q8TAP4 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC5.19□□□□□ -1.58
LMO3Q8TAP4 AURKAPS2-201ENST00000454983 333 ntBASIC5.19□□□□□ -1.58
LMO3Q8TAP4 AC108729.2-201ENST00000476543 840 ntBASIC5.19□□□□□ -1.58
LMO3Q8TAP4 AC004453.1-201ENST00000487895 408 ntBASIC5.19□□□□□ -1.58
LMO3Q8TAP4 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.19□□□□□ -1.58
LMO3Q8TAP4 OR51A1P-201ENST00000511110 946 ntBASIC5.19□□□□□ -1.58
LMO3Q8TAP4 SCARNA21.2-201ENST00000516600 166 ntBASIC5.19□□□□□ -1.58
LMO3Q8TAP4 AC021733.2-201ENST00000518830 497 ntBASIC5.19□□□□□ -1.58
LMO3Q8TAP4 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LMO3Q8TAP4 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.19□□□□□ -1.58
LMO3Q8TAP4 MTND2P32-201ENST00000521584 1038 ntBASIC5.19□□□□□ -1.58
LMO3Q8TAP4 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.19□□□□□ -1.58
LMO3Q8TAP4 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC5.19□□□□□ -1.58
LMO3Q8TAP4 AC139103.1-201ENST00000534696 1030 ntBASIC5.19□□□□□ -1.58
LMO3Q8TAP4 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.19□□□□□ -1.58
LMO3Q8TAP4 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.19□□□□□ -1.58
LMO3Q8TAP4 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.19□□□□□ -1.58
LMO3Q8TAP4 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.19□□□□□ -1.58
LMO3Q8TAP4 AC133644.2-201ENST00000608142 540 ntBASIC5.19□□□□□ -1.58
LMO3Q8TAP4 SDR42E1P1-201ENST00000611327 477 ntBASIC5.19□□□□□ -1.58
LMO3Q8TAP4 AC005156.1-201ENST00000613371 573 ntBASIC5.19□□□□□ -1.58
LMO3Q8TAP4 AC140725.3-201ENST00000616193 880 ntBASIC5.19□□□□□ -1.58
LMO3Q8TAP4 AL445493.3-201ENST00000619568 477 ntBASIC5.19□□□□□ -1.58
LMO3Q8TAP4 AC015804.1-201ENST00000622935 435 ntBASIC5.19□□□□□ -1.58
LMO3Q8TAP4 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.19□□□□□ -1.58
LMO3Q8TAP4 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
LMO3Q8TAP4 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LMO3Q8TAP4 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LMO3Q8TAP4 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.19□□□□□ -1.58
LMO3Q8TAP4 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
LMO3Q8TAP4 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.19□□□□□ -1.58
LMO3Q8TAP4 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.19□□□□□ -1.58
LMO3Q8TAP4 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
LMO3Q8TAP4 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
LMO3Q8TAP4 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
LMO3Q8TAP4 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
LMO3Q8TAP4 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
LMO3Q8TAP4 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
LMO3Q8TAP4 AP001284.1-201ENST00000528393 2118 ntBASIC5.18□□□□□ -1.58
LMO3Q8TAP4 SALL4P2-201ENST00000423288 2910 ntBASIC5.18□□□□□ -1.58
LMO3Q8TAP4 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
LMO3Q8TAP4 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.18□□□□□ -1.58
LMO3Q8TAP4 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LMO3Q8TAP4 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LMO3Q8TAP4 SNORA51.8-201ENST00000384234 132 ntBASIC5.18□□□□□ -1.58
LMO3Q8TAP4 RN7SKP278-201ENST00000410504 342 ntBASIC5.18□□□□□ -1.58
LMO3Q8TAP4 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC5.18□□□□□ -1.58
LMO3Q8TAP4 Z68694.1-201ENST00000413929 841 ntBASIC5.18□□□□□ -1.58
LMO3Q8TAP4 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.18□□□□□ -1.58
LMO3Q8TAP4 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC5.18□□□□□ -1.58
LMO3Q8TAP4 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC5.18□□□□□ -1.58
LMO3Q8TAP4 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC5.18□□□□□ -1.58
LMO3Q8TAP4 HMGB3P5-201ENST00000428894 612 ntBASIC5.18□□□□□ -1.58
LMO3Q8TAP4 AC114973.1-201ENST00000429057 632 ntBASIC5.18□□□□□ -1.58
LMO3Q8TAP4 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC5.18□□□□□ -1.58
LMO3Q8TAP4 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.18□□□□□ -1.58
LMO3Q8TAP4 TDGF1P1-201ENST00000445734 527 ntBASIC5.18□□□□□ -1.58
LMO3Q8TAP4 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.18□□□□□ -1.58
LMO3Q8TAP4 AC110749.1-201ENST00000462007 357 ntBASIC5.18□□□□□ -1.58
LMO3Q8TAP4 AP002371.1-201ENST00000463604 433 ntBASIC5.18□□□□□ -1.58
LMO3Q8TAP4 RN7SL515P-201ENST00000463999 297 ntBASIC5.18□□□□□ -1.58
LMO3Q8TAP4 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.18□□□□□ -1.58
LMO3Q8TAP4 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.18□□□□□ -1.58
LMO3Q8TAP4 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.18□□□□□ -1.58
LMO3Q8TAP4 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.18□□□□□ -1.58
LMO3Q8TAP4 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.18□□□□□ -1.58
LMO3Q8TAP4 AC016550.3-201ENST00000515706 767 ntBASIC5.18□□□□□ -1.58
LMO3Q8TAP4 BUD31P1-201ENST00000521828 359 ntBASIC5.18□□□□□ -1.58
LMO3Q8TAP4 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC5.18□□□□□ -1.58
LMO3Q8TAP4 MTND2P38-201ENST00000522536 667 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms