Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 RPP40P2-201ENST00000603596 712 ntBASIC5.75□□□□□ -1.49
CCDC33Q8N5R6 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC5.75□□□□□ -1.49
CCDC33Q8N5R6 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.75□□□□□ -1.49
CCDC33Q8N5R6 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.75□□□□□ -1.49
CCDC33Q8N5R6 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.75□□□□□ -1.49
CCDC33Q8N5R6 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC33Q8N5R6 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.75□□□□□ -1.49
CCDC33Q8N5R6 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC33Q8N5R6 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC33Q8N5R6 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.75□□□□□ -1.49
CCDC33Q8N5R6 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC33Q8N5R6 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.75□□□□□ -1.49
CCDC33Q8N5R6 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
CCDC33Q8N5R6 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
CCDC33Q8N5R6 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 HMGB3P18-201ENST00000406327 590 ntBASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 AC002524.1-201ENST00000411687 547 ntBASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 AL136231.1-201ENST00000429407 730 ntBASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 RPL5P25-201ENST00000441148 775 ntBASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 EEF1B2P5-201ENST00000444820 548 ntBASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 AL358794.1-201ENST00000445689 381 ntBASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 AL031313.1-201ENST00000448435 256 ntBASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 EXOSC3P1-201ENST00000448649 500 ntBASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 TRY2P-201ENST00000448860 689 ntBASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 AL009048.1-201ENST00000450437 298 ntBASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 RPL7P48-201ENST00000461513 746 ntBASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 RPS17P5-201ENST00000498293 408 ntBASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 AC093890.1-201ENST00000502554 540 ntBASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 AC025260.1-201ENST00000548858 430 ntBASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 HAUS8P1-201ENST00000549005 542 ntBASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 AP005403.1-201ENST00000579720 229 ntBASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 AP001160.4-201ENST00000596971 382 ntBASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 AC013244.3-201ENST00000605614 388 ntBASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 AC006484.1-201ENST00000435086 1884 ntBASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 ABCC13-202ENST00000463099 3842 ntBASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 AL606537.1-201ENST00000607258 2011 ntBASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC33Q8N5R6 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.73□□□□□ -1.49
CCDC33Q8N5R6 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC33Q8N5R6 AL022311.1-201ENST00000623726 19416 ntBASIC5.73□□□□□ -1.49
CCDC33Q8N5R6 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC33Q8N5R6 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.73□□□□□ -1.49
CCDC33Q8N5R6 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC33Q8N5R6 TTC39DP-201ENST00000416781 1688 ntBASIC5.73□□□□□ -1.49
CCDC33Q8N5R6 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC33Q8N5R6 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC33Q8N5R6 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
CCDC33Q8N5R6 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC33Q8N5R6 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC33Q8N5R6 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC33Q8N5R6 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms