Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AC243654.2-201ENST00000612843 443 ntBASIC6.9□□□□□ -1.3
NPAS4Q8IUM7 CR392039.4-201ENST00000624968 501 ntBASIC6.9□□□□□ -1.3
NPAS4Q8IUM7 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC6.9□□□□□ -1.3
NPAS4Q8IUM7 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6.9□□□□□ -1.3
NPAS4Q8IUM7 MIR4302-201ENST00000638058 60 ntBASIC6.9□□□□□ -1.3
NPAS4Q8IUM7 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
NPAS4Q8IUM7 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC6.9□□□□□ -1.31
NPAS4Q8IUM7 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
NPAS4Q8IUM7 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
NPAS4Q8IUM7 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC6.9□□□□□ -1.31
NPAS4Q8IUM7 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
NPAS4Q8IUM7 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC6.9□□□□□ -1.31
NPAS4Q8IUM7 ALB-219ENST00000621085 1418 ntTSL 5 BASIC6.9□□□□□ -1.31
NPAS4Q8IUM7 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
NPAS4Q8IUM7 CR383658.2-201ENST00000547576 1525 ntBASIC6.9□□□□□ -1.31
NPAS4Q8IUM7 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
NPAS4Q8IUM7 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
NPAS4Q8IUM7 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
NPAS4Q8IUM7 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
NPAS4Q8IUM7 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC6.9□□□□□ -1.31
NPAS4Q8IUM7 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 Y_RNA.6-201ENST00000362350 114 ntBASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 RNU6-216P-201ENST00000363282 104 ntBASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 RNU6-1119P-201ENST00000384349 108 ntBASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 Y_RNA.516-201ENST00000384541 124 ntBASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 MIR130B-202ENST00000385018 82 ntBASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 GAPDHP42-201ENST00000406848 981 ntBASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 CYCSP52-201ENST00000422857 310 ntBASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 CYCSP46-201ENST00000423569 204 ntBASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 NDUFS5P5-201ENST00000437256 321 ntBASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 AL831737.1-201ENST00000441288 271 ntBASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 AL357520.1-201ENST00000441557 453 ntBASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 AL671855.1-201ENST00000446875 1203 ntBASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 IGBP1P3-201ENST00000447449 1000 ntBASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 ST13P20-201ENST00000447996 1065 ntBASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 RNU6-1218P-201ENST00000458990 108 ntBASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 AC098847.1-201ENST00000473094 348 ntBASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 RN7SL326P-201ENST00000477493 296 ntBASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 RPS4XP15-201ENST00000489210 795 ntBASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 AC113430.1-201ENST00000506872 718 ntBASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 AC011411.1-201ENST00000509592 876 ntBASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 RNY4P37-201ENST00000516225 96 ntBASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 IGHV3-57-201ENST00000520143 280 ntBASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 SULT1C2P2-201ENST00000562517 294 ntBASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 ANKRD36BP2-206ENST00000575193 1245 ntBASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 MIR3614-201ENST00000581261 86 ntBASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 AC005332.4-201ENST00000592752 579 ntBASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 MTND4P29-201ENST00000503122 1372 ntBASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 AL158152.1-201ENST00000602652 1435 ntBASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 AL031651.1-201ENST00000615357 1438 ntBASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NPAS4Q8IUM7 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms