Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.69□□□□□ -1.5
RFX7Q2KHR2 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC5.69□□□□□ -1.5
RFX7Q2KHR2 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC5.69□□□□□ -1.5
RFX7Q2KHR2 MIR3936-201ENST00000584304 110 ntBASIC5.69□□□□□ -1.5
RFX7Q2KHR2 RPL12P25-202ENST00000598100 674 ntBASIC5.69□□□□□ -1.5
RFX7Q2KHR2 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RFX7Q2KHR2 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.69□□□□□ -1.5
RFX7Q2KHR2 RPL26P30-202ENST00000602923 645 ntBASIC5.69□□□□□ -1.5
RFX7Q2KHR2 AC015871.5-202ENST00000623252 701 ntBASIC5.69□□□□□ -1.5
RFX7Q2KHR2 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
RFX7Q2KHR2 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.69□□□□□ -1.5
RFX7Q2KHR2 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.69□□□□□ -1.5
RFX7Q2KHR2 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RFX7Q2KHR2 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
RFX7Q2KHR2 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.69□□□□□ -1.5
RFX7Q2KHR2 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
RFX7Q2KHR2 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
RFX7Q2KHR2 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
RFX7Q2KHR2 RNU1-83P-201ENST00000363426 164 ntBASIC5.68□□□□□ -1.5
RFX7Q2KHR2 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.68□□□□□ -1.5
RFX7Q2KHR2 SNORA62-201ENST00000365493 153 ntBASIC5.68□□□□□ -1.5
RFX7Q2KHR2 RN7SKP267-201ENST00000410381 285 ntBASIC5.68□□□□□ -1.5
RFX7Q2KHR2 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5.68□□□□□ -1.5
RFX7Q2KHR2 Z74021.1-201ENST00000423610 407 ntBASIC5.68□□□□□ -1.5
RFX7Q2KHR2 CHIAP3-201ENST00000423668 1133 ntBASIC5.68□□□□□ -1.5
RFX7Q2KHR2 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.68□□□□□ -1.5
RFX7Q2KHR2 TDGF1P1-201ENST00000445734 527 ntBASIC5.68□□□□□ -1.5
RFX7Q2KHR2 EIF2S2P2-201ENST00000447161 982 ntBASIC5.68□□□□□ -1.5
RFX7Q2KHR2 AC090142.1-201ENST00000465776 462 ntBASIC5.68□□□□□ -1.5
RFX7Q2KHR2 AK3P4-201ENST00000504283 583 ntBASIC5.68□□□□□ -1.5
RFX7Q2KHR2 AC087477.6-201ENST00000559595 843 ntBASIC5.68□□□□□ -1.5
RFX7Q2KHR2 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.68□□□□□ -1.5
RFX7Q2KHR2 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC5.68□□□□□ -1.5
RFX7Q2KHR2 AC008782.1-201ENST00000603386 430 ntBASIC5.68□□□□□ -1.5
RFX7Q2KHR2 IMMP1LP1-201ENST00000605170 488 ntBASIC5.68□□□□□ -1.5
RFX7Q2KHR2 AC073137.1-201ENST00000605636 634 ntBASIC5.68□□□□□ -1.5
RFX7Q2KHR2 OR7A19P-201ENST00000608051 733 ntBASIC5.68□□□□□ -1.5
RFX7Q2KHR2 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.68□□□□□ -1.5
RFX7Q2KHR2 AC097461.1-201ENST00000568928 2821 ntBASIC5.68□□□□□ -1.5
RFX7Q2KHR2 AC135352.1-201ENST00000506173 1418 ntBASIC5.68□□□□□ -1.5
RFX7Q2KHR2 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.68□□□□□ -1.5
RFX7Q2KHR2 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.68□□□□□ -1.5
RFX7Q2KHR2 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.68□□□□□ -1.5
RFX7Q2KHR2 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
RFX7Q2KHR2 MAPK10-286ENST00000641208 8747 ntBASIC5.68□□□□□ -1.5
RFX7Q2KHR2 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RFX7Q2KHR2 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
RFX7Q2KHR2 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.68□□□□□ -1.5
RFX7Q2KHR2 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RFX7Q2KHR2 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
RFX7Q2KHR2 OR51H2P-202ENST00000641424 3046 ntBASIC5.68□□□□□ -1.5
RFX7Q2KHR2 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RFX7Q2KHR2 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RFX7Q2KHR2 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RFX7Q2KHR2 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RFX7Q2KHR2 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC5.67□□□□□ -1.5
RFX7Q2KHR2 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RFX7Q2KHR2 snoU13.1-201ENST00000459157 104 ntBASIC5.67□□□□□ -1.5
RFX7Q2KHR2 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.67□□□□□ -1.5
RFX7Q2KHR2 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.67□□□□□ -1.5
RFX7Q2KHR2 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.67□□□□□ -1.5
RFX7Q2KHR2 NPM1P21-201ENST00000513394 762 ntBASIC5.67□□□□□ -1.5
RFX7Q2KHR2 RNU6ATAC39P-201ENST00000516309 149 ntBASIC5.67□□□□□ -1.5
RFX7Q2KHR2 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.67□□□□□ -1.5
RFX7Q2KHR2 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.67□□□□□ -1.5
RFX7Q2KHR2 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.67□□□□□ -1.5
RFX7Q2KHR2 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.67□□□□□ -1.5
RFX7Q2KHR2 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.67□□□□□ -1.5
RFX7Q2KHR2 AC068831.4-201ENST00000556118 109 ntBASIC5.67□□□□□ -1.5
RFX7Q2KHR2 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.67□□□□□ -1.5
RFX7Q2KHR2 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.67□□□□□ -1.5
RFX7Q2KHR2 MIR4284-201ENST00000578924 81 ntBASIC5.67□□□□□ -1.5
RFX7Q2KHR2 SS18L2P2-201ENST00000583960 235 ntBASIC5.67□□□□□ -1.5
RFX7Q2KHR2 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.67□□□□□ -1.5
RFX7Q2KHR2 AC130352.1-201ENST00000602979 661 ntBASIC5.67□□□□□ -1.5
RFX7Q2KHR2 RBPJP2-201ENST00000618187 1444 ntBASIC5.67□□□□□ -1.5
RFX7Q2KHR2 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RFX7Q2KHR2 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RFX7Q2KHR2 OR56B2P-202ENST00000641377 2453 ntBASIC5.67□□□□□ -1.5
RFX7Q2KHR2 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RFX7Q2KHR2 AC139426.3-201ENST00000605648 2059 ntBASIC5.67□□□□□ -1.5
RFX7Q2KHR2 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RFX7Q2KHR2 AC006484.1-201ENST00000435086 1884 ntBASIC5.67□□□□□ -1.5
RFX7Q2KHR2 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RFX7Q2KHR2 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RFX7Q2KHR2 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RFX7Q2KHR2 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RFX7Q2KHR2 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RFX7Q2KHR2 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
RFX7Q2KHR2 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RFX7Q2KHR2 RPL32P3-201ENST00000359025 275 ntBASIC5.67□□□□□ -1.5
RFX7Q2KHR2 RNU4-39P-201ENST00000362455 127 ntBASIC5.67□□□□□ -1.5
RFX7Q2KHR2 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RFX7Q2KHR2 UBBP2-201ENST00000376781 231 ntBASIC5.67□□□□□ -1.5
RFX7Q2KHR2 MIR921-201ENST00000401133 56 ntBASIC5.67□□□□□ -1.5
RFX7Q2KHR2 AC140479.3-201ENST00000418944 1126 ntBASIC5.67□□□□□ -1.5
RFX7Q2KHR2 H2AFZP5-201ENST00000446960 382 ntBASIC5.67□□□□□ -1.5
RFX7Q2KHR2 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.67□□□□□ -1.5
RFX7Q2KHR2 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.67□□□□□ -1.5
RFX7Q2KHR2 AC108751.2-201ENST00000469993 231 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms