Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SOX4Q06945 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
SOX4Q06945 PRNCR1-201ENST00000635449 12727 ntBASIC6.69□□□□□ -1.34
SOX4Q06945 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SOX4Q06945 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SOX4Q06945 MAPK10-270ENST00000641102 3538 ntBASIC6.68□□□□□ -1.34
SOX4Q06945 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
SOX4Q06945 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.68□□□□□ -1.34
SOX4Q06945 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
SOX4Q06945 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SOX4Q06945 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SOX4Q06945 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SOX4Q06945 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
SOX4Q06945 RNU6-660P-201ENST00000364566 109 ntBASIC6.68□□□□□ -1.34
SOX4Q06945 SNORA43.1-201ENST00000364863 140 ntBASIC6.68□□□□□ -1.34
SOX4Q06945 Y_RNA.311-201ENST00000365068 96 ntBASIC6.68□□□□□ -1.34
SOX4Q06945 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
SOX4Q06945 Y_RNA.450-201ENST00000384198 113 ntBASIC6.68□□□□□ -1.34
SOX4Q06945 Y_RNA.453-201ENST00000384223 109 ntBASIC6.68□□□□□ -1.34
SOX4Q06945 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
SOX4Q06945 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC6.68□□□□□ -1.34
SOX4Q06945 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.68□□□□□ -1.34
SOX4Q06945 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC6.68□□□□□ -1.34
SOX4Q06945 RPL21P32-201ENST00000419877 477 ntBASIC6.68□□□□□ -1.34
SOX4Q06945 RPL7P44-201ENST00000424827 742 ntBASIC6.68□□□□□ -1.34
SOX4Q06945 AC233728.2-201ENST00000425348 757 ntBASIC6.68□□□□□ -1.34
SOX4Q06945 AC130360.1-201ENST00000425489 1117 ntBASIC6.68□□□□□ -1.34
SOX4Q06945 NPM1P24-201ENST00000428039 894 ntBASIC6.68□□□□□ -1.34
SOX4Q06945 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC6.68□□□□□ -1.34
SOX4Q06945 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC6.68□□□□□ -1.34
SOX4Q06945 UBE2V1P3-201ENST00000439651 417 ntBASIC6.68□□□□□ -1.34
SOX4Q06945 EIF5AP4-201ENST00000441206 465 ntBASIC6.68□□□□□ -1.34
SOX4Q06945 AC011742.2-201ENST00000443818 352 ntBASIC6.68□□□□□ -1.34
SOX4Q06945 GAPDHP23-201ENST00000444823 993 ntBASIC6.68□□□□□ -1.34
SOX4Q06945 GDI2P2-201ENST00000445131 608 ntBASIC6.68□□□□□ -1.34
SOX4Q06945 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC6.68□□□□□ -1.34
SOX4Q06945 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.68□□□□□ -1.34
SOX4Q06945 RPS4XP15-201ENST00000489210 795 ntBASIC6.68□□□□□ -1.34
SOX4Q06945 AC069439.1-201ENST00000494739 167 ntBASIC6.68□□□□□ -1.34
SOX4Q06945 LSM3P4-201ENST00000502948 309 ntBASIC6.68□□□□□ -1.34
SOX4Q06945 AC105252.1-201ENST00000503089 286 ntBASIC6.68□□□□□ -1.34
SOX4Q06945 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC6.68□□□□□ -1.34
SOX4Q06945 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC6.68□□□□□ -1.34
SOX4Q06945 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.68□□□□□ -1.34
SOX4Q06945 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.68□□□□□ -1.34
SOX4Q06945 STMN1P2-201ENST00000508435 439 ntBASIC6.68□□□□□ -1.34
SOX4Q06945 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC6.68□□□□□ -1.34
SOX4Q06945 HMGB1P44-201ENST00000508597 572 ntBASIC6.68□□□□□ -1.34
SOX4Q06945 AC090958.1-201ENST00000511122 351 ntBASIC6.68□□□□□ -1.34
SOX4Q06945 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.68□□□□□ -1.34
SOX4Q06945 RN7SKP238-201ENST00000516483 249 ntBASIC6.68□□□□□ -1.34
SOX4Q06945 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC6.68□□□□□ -1.34
SOX4Q06945 AC130365.2-201ENST00000525882 1201 ntBASIC6.68□□□□□ -1.34
SOX4Q06945 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
SOX4Q06945 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC6.68□□□□□ -1.34
SOX4Q06945 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC6.68□□□□□ -1.34
SOX4Q06945 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC6.68□□□□□ -1.34
SOX4Q06945 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.68□□□□□ -1.34
SOX4Q06945 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC6.68□□□□□ -1.34
SOX4Q06945 AC006960.3-201ENST00000561845 705 ntBASIC6.68□□□□□ -1.34
SOX4Q06945 RBM22P12-201ENST00000567098 1255 ntBASIC6.68□□□□□ -1.34
SOX4Q06945 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.68□□□□□ -1.34
SOX4Q06945 MIR3189-201ENST00000578735 73 ntBASIC6.68□□□□□ -1.34
SOX4Q06945 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.68□□□□□ -1.34
SOX4Q06945 SEPT7P9-203ENST00000604116 343 ntBASIC6.68□□□□□ -1.34
SOX4Q06945 AP005137.2-201ENST00000609238 400 ntBASIC6.68□□□□□ -1.34
SOX4Q06945 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SOX4Q06945 AC024884.1-201ENST00000620583 399 ntBASIC6.68□□□□□ -1.34
SOX4Q06945 AC011815.3-201ENST00000624194 473 ntBASIC6.68□□□□□ -1.34
SOX4Q06945 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC6.68□□□□□ -1.34
SOX4Q06945 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC6.68□□□□□ -1.34
SOX4Q06945 FER-210ENST00000628534 558 ntTSL 5 BASIC6.68□□□□□ -1.34
SOX4Q06945 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC6.68□□□□□ -1.34
SOX4Q06945 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SOX4Q06945 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SOX4Q06945 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
SOX4Q06945 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SOX4Q06945 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC6.68□□□□□ -1.34
SOX4Q06945 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.68□□□□□ -1.34
SOX4Q06945 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SOX4Q06945 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SOX4Q06945 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SOX4Q06945 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC6.68□□□□□ -1.34
SOX4Q06945 PABPC1P9-201ENST00000426076 1612 ntBASIC6.68□□□□□ -1.34
SOX4Q06945 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.68□□□□□ -1.34
SOX4Q06945 AC022325.1-201ENST00000502748 2199 ntBASIC6.68□□□□□ -1.34
SOX4Q06945 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.68□□□□□ -1.34
SOX4Q06945 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SOX4Q06945 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SOX4Q06945 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
SOX4Q06945 PHACTR2P1-201ENST00000605639 1414 ntBASIC6.67□□□□□ -1.34
SOX4Q06945 AC011416.1-201ENST00000514947 1732 ntBASIC6.67□□□□□ -1.34
SOX4Q06945 AC008627.1-201ENST00000517511 1704 ntBASIC6.67□□□□□ -1.34
SOX4Q06945 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
SOX4Q06945 AC131971.1-201ENST00000332881 1482 ntBASIC6.67□□□□□ -1.34
SOX4Q06945 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SOX4Q06945 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
SOX4Q06945 AP002001.2-201ENST00000529025 1469 ntBASIC6.67□□□□□ -1.34
SOX4Q06945 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SOX4Q06945 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms