Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.16□□□□□ -1.58
RAE1P78406 RPL7AP49-201ENST00000429522 581 ntBASIC5.16□□□□□ -1.58
RAE1P78406 AL591438.1-201ENST00000433508 581 ntBASIC5.16□□□□□ -1.58
RAE1P78406 RPL23AP19-201ENST00000436229 369 ntBASIC5.16□□□□□ -1.58
RAE1P78406 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.16□□□□□ -1.58
RAE1P78406 AC064862.4-201ENST00000442180 334 ntBASIC5.16□□□□□ -1.58
RAE1P78406 RPL36AP39-201ENST00000445859 318 ntBASIC5.16□□□□□ -1.58
RAE1P78406 CASP3P1-201ENST00000446037 609 ntBASIC5.16□□□□□ -1.58
RAE1P78406 OR6K5P-201ENST00000447050 945 ntBASIC5.16□□□□□ -1.58
RAE1P78406 AC112492.1-201ENST00000449607 712 ntBASIC5.16□□□□□ -1.58
RAE1P78406 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.16□□□□□ -1.58
RAE1P78406 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC5.16□□□□□ -1.58
RAE1P78406 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.16□□□□□ -1.58
RAE1P78406 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.16□□□□□ -1.58
RAE1P78406 RNU6-599P-201ENST00000459383 107 ntBASIC5.16□□□□□ -1.58
RAE1P78406 RNU6-1193P-201ENST00000459461 107 ntBASIC5.16□□□□□ -1.58
RAE1P78406 AC005410.1-202ENST00000460347 485 ntBASIC5.16□□□□□ -1.58
RAE1P78406 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC5.16□□□□□ -1.58
RAE1P78406 AC069528.1-202ENST00000482888 637 ntBASIC5.16□□□□□ -1.58
RAE1P78406 HPRT1P2-201ENST00000505250 544 ntBASIC5.16□□□□□ -1.58
RAE1P78406 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.16□□□□□ -1.58
RAE1P78406 AC008565.1-201ENST00000509046 885 ntBASIC5.16□□□□□ -1.58
RAE1P78406 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.16□□□□□ -1.58
RAE1P78406 MTND6P2-201ENST00000512226 524 ntBASIC5.16□□□□□ -1.58
RAE1P78406 AC092593.2-201ENST00000513866 913 ntBASIC5.16□□□□□ -1.58
RAE1P78406 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.16□□□□□ -1.58
RAE1P78406 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.16□□□□□ -1.58
RAE1P78406 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC5.16□□□□□ -1.58
RAE1P78406 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.16□□□□□ -1.58
RAE1P78406 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.16□□□□□ -1.58
RAE1P78406 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.16□□□□□ -1.58
RAE1P78406 EMP1-206ENST00000537612 505 ntTSL 3 BASIC5.16□□□□□ -1.58
RAE1P78406 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RAE1P78406 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC5.16□□□□□ -1.58
RAE1P78406 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.16□□□□□ -1.58
RAE1P78406 RN7SL290P-201ENST00000578661 300 ntBASIC5.16□□□□□ -1.58
RAE1P78406 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC5.16□□□□□ -1.58
RAE1P78406 AL135786.2-201ENST00000608422 615 ntBASIC5.16□□□□□ -1.58
RAE1P78406 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC5.16□□□□□ -1.58
RAE1P78406 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RAE1P78406 RNU6-368P-201ENST00000620928 107 ntBASIC5.16□□□□□ -1.58
RAE1P78406 RNU6-538P-201ENST00000622329 107 ntBASIC5.16□□□□□ -1.58
RAE1P78406 AC109454.4-201ENST00000623411 649 ntBASIC5.16□□□□□ -1.58
RAE1P78406 AC132068.1-201ENST00000623805 459 ntBASIC5.16□□□□□ -1.58
RAE1P78406 AL121594.5-201ENST00000631724 573 ntBASIC5.16□□□□□ -1.58
RAE1P78406 AC099654.6-201ENST00000636487 512 ntBASIC5.16□□□□□ -1.58
RAE1P78406 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC5.16□□□□□ -1.58
RAE1P78406 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.16□□□□□ -1.58
RAE1P78406 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RAE1P78406 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC5.16□□□□□ -1.58
RAE1P78406 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RAE1P78406 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.16□□□□□ -1.58
RAE1P78406 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.16□□□□□ -1.58
RAE1P78406 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.16□□□□□ -1.58
RAE1P78406 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
RAE1P78406 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RAE1P78406 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RAE1P78406 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RAE1P78406 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.15□□□□□ -1.58
RAE1P78406 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.58
RAE1P78406 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.15□□□□□ -1.58
RAE1P78406 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
RAE1P78406 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RAE1P78406 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RAE1P78406 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
RAE1P78406 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RAE1P78406 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
RAE1P78406 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
RAE1P78406 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
RAE1P78406 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
RAE1P78406 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.15□□□□□ -1.59
RAE1P78406 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC5.15□□□□□ -1.59
RAE1P78406 FCF1P5-201ENST00000406490 482 ntBASIC5.15□□□□□ -1.59
RAE1P78406 OR2AT2P-201ENST00000413438 905 ntBASIC5.15□□□□□ -1.59
RAE1P78406 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC5.15□□□□□ -1.59
RAE1P78406 TAF13P2-201ENST00000416876 286 ntBASIC5.15□□□□□ -1.59
RAE1P78406 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC5.15□□□□□ -1.59
RAE1P78406 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.15□□□□□ -1.59
RAE1P78406 SRSF1P1-201ENST00000424058 520 ntBASIC5.15□□□□□ -1.59
RAE1P78406 C1DP1-201ENST00000426049 402 ntBASIC5.15□□□□□ -1.59
RAE1P78406 USP9YP11-201ENST00000427537 717 ntBASIC5.15□□□□□ -1.59
RAE1P78406 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.15□□□□□ -1.59
RAE1P78406 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.15□□□□□ -1.59
RAE1P78406 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC5.15□□□□□ -1.59
RAE1P78406 NANOGP2-201ENST00000435391 727 ntBASIC5.15□□□□□ -1.59
RAE1P78406 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.15□□□□□ -1.59
RAE1P78406 RPL5P25-201ENST00000441148 775 ntBASIC5.15□□□□□ -1.59
RAE1P78406 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC5.15□□□□□ -1.59
RAE1P78406 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.15□□□□□ -1.59
RAE1P78406 MRPL35P4-201ENST00000453682 566 ntBASIC5.15□□□□□ -1.59
RAE1P78406 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RAE1P78406 CDC42P1-201ENST00000456658 548 ntBASIC5.15□□□□□ -1.59
RAE1P78406 RNU7-140P-201ENST00000459546 60 ntBASIC5.15□□□□□ -1.59
RAE1P78406 NDUFA5P9-201ENST00000472609 340 ntBASIC5.15□□□□□ -1.59
RAE1P78406 AC092754.1-201ENST00000472975 479 ntBASIC5.15□□□□□ -1.59
RAE1P78406 RPL23AP44-201ENST00000482216 473 ntBASIC5.15□□□□□ -1.59
RAE1P78406 RPL5P23-201ENST00000496040 868 ntBASIC5.15□□□□□ -1.59
RAE1P78406 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.15□□□□□ -1.59
RAE1P78406 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RAE1P78406 AC034244.1-201ENST00000507687 207 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms