Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.2□□□□□ -1.74
LMO4P61968 RN7SKP145-201ENST00000363291 303 ntBASIC4.2□□□□□ -1.74
LMO4P61968 RNA5SP223-201ENST00000365174 120 ntBASIC4.2□□□□□ -1.74
LMO4P61968 CCNB2P1-201ENST00000399411 1150 ntBASIC4.2□□□□□ -1.74
LMO4P61968 HMGB3P7-201ENST00000400214 611 ntBASIC4.2□□□□□ -1.74
LMO4P61968 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
LMO4P61968 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LMO4P61968 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC4.2□□□□□ -1.74
LMO4P61968 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC4.2□□□□□ -1.74
LMO4P61968 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC4.2□□□□□ -1.74
LMO4P61968 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC4.2□□□□□ -1.74
LMO4P61968 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.2□□□□□ -1.74
LMO4P61968 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC4.2□□□□□ -1.74
LMO4P61968 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC4.2□□□□□ -1.74
LMO4P61968 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC4.2□□□□□ -1.74
LMO4P61968 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC4.2□□□□□ -1.74
LMO4P61968 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC4.2□□□□□ -1.74
LMO4P61968 AL137845.2-201ENST00000444292 988 ntBASIC4.2□□□□□ -1.74
LMO4P61968 AC112498.1-201ENST00000444401 332 ntBASIC4.2□□□□□ -1.74
LMO4P61968 H2AFZP6-201ENST00000444403 394 ntBASIC4.2□□□□□ -1.74
LMO4P61968 IGHV5-78-201ENST00000450948 295 ntBASIC4.2□□□□□ -1.74
LMO4P61968 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC4.2□□□□□ -1.74
LMO4P61968 AC069277.2-201ENST00000454211 432 ntBASIC4.2□□□□□ -1.74
LMO4P61968 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.2□□□□□ -1.74
LMO4P61968 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.2□□□□□ -1.74
LMO4P61968 IGLV2-34-201ENST00000490007 283 ntBASIC4.2□□□□□ -1.74
LMO4P61968 BOLA3P3-201ENST00000505182 232 ntBASIC4.2□□□□□ -1.74
LMO4P61968 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.2□□□□□ -1.74
LMO4P61968 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.2□□□□□ -1.74
LMO4P61968 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.2□□□□□ -1.74
LMO4P61968 IMPA1P1-201ENST00000510718 842 ntBASIC4.2□□□□□ -1.74
LMO4P61968 HMGB1P47-201ENST00000511281 589 ntBASIC4.2□□□□□ -1.74
LMO4P61968 RNU6-491P-201ENST00000516099 110 ntBASIC4.2□□□□□ -1.74
LMO4P61968 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.2□□□□□ -1.74
LMO4P61968 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.2□□□□□ -1.74
LMO4P61968 AP001636.2-201ENST00000525517 696 ntBASIC4.2□□□□□ -1.74
LMO4P61968 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
LMO4P61968 GCSHP4-201ENST00000538792 439 ntBASIC4.2□□□□□ -1.74
LMO4P61968 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
LMO4P61968 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.2□□□□□ -1.74
LMO4P61968 BGLT3-201ENST00000564523 994 ntBASIC4.2□□□□□ -1.74
LMO4P61968 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC4.2□□□□□ -1.74
LMO4P61968 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC4.2□□□□□ -1.74
LMO4P61968 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.2□□□□□ -1.74
LMO4P61968 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC4.2□□□□□ -1.74
LMO4P61968 SNX6P1-201ENST00000601728 1224 ntBASIC4.2□□□□□ -1.74
LMO4P61968 MTATP6P2-201ENST00000603319 678 ntBASIC4.2□□□□□ -1.74
LMO4P61968 AL031320.1-201ENST00000604177 357 ntBASIC4.2□□□□□ -1.74
LMO4P61968 AL445435.1-201ENST00000604232 665 ntBASIC4.2□□□□□ -1.74
LMO4P61968 AC114878.2-201ENST00000604863 1251 ntBASIC4.2□□□□□ -1.74
LMO4P61968 AC019131.2-201ENST00000609071 870 ntBASIC4.2□□□□□ -1.74
LMO4P61968 AC074140.1-201ENST00000621617 208 ntBASIC4.2□□□□□ -1.74
LMO4P61968 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.2□□□□□ -1.74
LMO4P61968 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.2□□□□□ -1.74
LMO4P61968 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.2□□□□□ -1.74
LMO4P61968 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LMO4P61968 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC4.2□□□□□ -1.74
LMO4P61968 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LMO4P61968 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LMO4P61968 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LMO4P61968 AP005432.1-201ENST00000580891 3485 ntBASIC4.2□□□□□ -1.74
LMO4P61968 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.2□□□□□ -1.74
LMO4P61968 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
LMO4P61968 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.2□□□□□ -1.74
LMO4P61968 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LMO4P61968 AL645568.2-201ENST00000432815 1337 ntBASIC4.2□□□□□ -1.74
LMO4P61968 AL355834.1-201ENST00000556602 3965 ntBASIC4.2□□□□□ -1.74
LMO4P61968 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
LMO4P61968 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.19□□□□□ -1.74
LMO4P61968 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC4.19□□□□□ -1.74
LMO4P61968 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
LMO4P61968 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.19□□□□□ -1.74
LMO4P61968 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
LMO4P61968 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
LMO4P61968 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.19□□□□□ -1.74
LMO4P61968 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.19□□□□□ -1.74
LMO4P61968 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC4.19□□□□□ -1.74
LMO4P61968 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC4.19□□□□□ -1.74
LMO4P61968 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
LMO4P61968 RN7SKP74-201ENST00000362849 309 ntBASIC4.19□□□□□ -1.74
LMO4P61968 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
LMO4P61968 OR1L6-202ENST00000373684 1044 ntBASIC4.19□□□□□ -1.74
LMO4P61968 SNORA2.3-201ENST00000383920 135 ntBASIC4.19□□□□□ -1.74
LMO4P61968 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
LMO4P61968 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
LMO4P61968 MTND4P13-201ENST00000402078 1023 ntBASIC4.19□□□□□ -1.74
LMO4P61968 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC4.19□□□□□ -1.74
LMO4P61968 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.19□□□□□ -1.74
LMO4P61968 AC106883.1-201ENST00000418805 562 ntBASIC4.19□□□□□ -1.74
LMO4P61968 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.19□□□□□ -1.74
LMO4P61968 UBE2D3P3-201ENST00000426992 425 ntBASIC4.19□□□□□ -1.74
LMO4P61968 RPL7P11-201ENST00000437586 658 ntBASIC4.19□□□□□ -1.74
LMO4P61968 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.19□□□□□ -1.74
LMO4P61968 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.19□□□□□ -1.74
LMO4P61968 AC099063.2-201ENST00000446360 662 ntBASIC4.19□□□□□ -1.74
LMO4P61968 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
LMO4P61968 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
LMO4P61968 MTND1P31-201ENST00000449206 961 ntBASIC4.19□□□□□ -1.74
LMO4P61968 TCEA1P1-201ENST00000449716 880 ntBASIC4.19□□□□□ -1.74
LMO4P61968 BX842559.2-201ENST00000451418 605 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms