Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AC133555.2-201ENST00000550213 292 ntBASIC4.55□□□□□ -1.68
LIM2P55344 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC4.55□□□□□ -1.68
LIM2P55344 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.55□□□□□ -1.68
LIM2P55344 RN7SL802P-201ENST00000577858 299 ntBASIC4.55□□□□□ -1.68
LIM2P55344 AC016839.1-201ENST00000578162 867 ntBASIC4.55□□□□□ -1.68
LIM2P55344 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.55□□□□□ -1.68
LIM2P55344 AC022387.2-201ENST00000604050 448 ntBASIC4.55□□□□□ -1.68
LIM2P55344 AL031320.1-201ENST00000604177 357 ntBASIC4.55□□□□□ -1.68
LIM2P55344 GMCL1P2-201ENST00000605230 823 ntBASIC4.55□□□□□ -1.68
LIM2P55344 FAM27B-201ENST00000610601 213 ntBASIC4.55□□□□□ -1.68
LIM2P55344 AC073869.7-201ENST00000640874 297 ntBASIC4.55□□□□□ -1.68
LIM2P55344 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
LIM2P55344 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.55□□□□□ -1.68
LIM2P55344 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
LIM2P55344 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LIM2P55344 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
LIM2P55344 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
LIM2P55344 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LIM2P55344 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
LIM2P55344 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.55□□□□□ -1.68
LIM2P55344 MTCO1P7-201ENST00000419523 1542 ntBASIC4.55□□□□□ -1.68
LIM2P55344 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.55□□□□□ -1.68
LIM2P55344 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
LIM2P55344 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LIM2P55344 NCLP2-201ENST00000416078 1462 ntBASIC4.55□□□□□ -1.68
LIM2P55344 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LIM2P55344 AC020633.1-201ENST00000468439 2247 ntBASIC4.54□□□□□ -1.68
LIM2P55344 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
LIM2P55344 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
LIM2P55344 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LIM2P55344 AC133552.1-201ENST00000569988 4007 ntBASIC4.54□□□□□ -1.68
LIM2P55344 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LIM2P55344 AL034370.1-201ENST00000397254 1590 ntBASIC4.54□□□□□ -1.68
LIM2P55344 RNA5SP191-201ENST00000362585 102 ntBASIC4.54□□□□□ -1.68
LIM2P55344 RNU6-386P-201ENST00000362650 107 ntBASIC4.54□□□□□ -1.68
LIM2P55344 RN7SKP74-201ENST00000362849 309 ntBASIC4.54□□□□□ -1.68
LIM2P55344 MIR7-1-201ENST00000384871 110 ntBASIC4.54□□□□□ -1.68
LIM2P55344 AL592291.1-201ENST00000403830 352 ntBASIC4.54□□□□□ -1.68
LIM2P55344 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LIM2P55344 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.54□□□□□ -1.68
LIM2P55344 EIF4A1P1-201ENST00000420241 934 ntBASIC4.54□□□□□ -1.68
LIM2P55344 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.54□□□□□ -1.68
LIM2P55344 AL645608.4-201ENST00000423619 154 ntBASIC4.54□□□□□ -1.68
LIM2P55344 YY1P1-201ENST00000427625 668 ntBASIC4.54□□□□□ -1.68
LIM2P55344 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.54□□□□□ -1.68
LIM2P55344 OR2B7P-201ENST00000429302 934 ntBASIC4.54□□□□□ -1.68
LIM2P55344 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LIM2P55344 RSL24D1P2-201ENST00000445584 366 ntBASIC4.54□□□□□ -1.68
LIM2P55344 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC4.54□□□□□ -1.68
LIM2P55344 RPS5P7-201ENST00000456664 608 ntBASIC4.54□□□□□ -1.68
LIM2P55344 AC112206.1-201ENST00000468416 477 ntBASIC4.54□□□□□ -1.68
LIM2P55344 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.54□□□□□ -1.68
LIM2P55344 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.54□□□□□ -1.68
LIM2P55344 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.54□□□□□ -1.68
LIM2P55344 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.54□□□□□ -1.68
LIM2P55344 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.54□□□□□ -1.68
LIM2P55344 AC009268.1-201ENST00000561352 1203 ntBASIC4.54□□□□□ -1.68
LIM2P55344 AC093249.4-201ENST00000564755 259 ntBASIC4.54□□□□□ -1.68
LIM2P55344 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.54□□□□□ -1.68
LIM2P55344 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.54□□□□□ -1.68
LIM2P55344 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
LIM2P55344 MIR5699-201ENST00000578903 90 ntBASIC4.54□□□□□ -1.68
LIM2P55344 AP002884.5-201ENST00000595053 1132 ntBASIC4.54□□□□□ -1.68
LIM2P55344 RNF138P2-201ENST00000603490 592 ntBASIC4.54□□□□□ -1.68
LIM2P55344 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.54□□□□□ -1.68
LIM2P55344 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LIM2P55344 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.54□□□□□ -1.68
LIM2P55344 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.54□□□□□ -1.68
LIM2P55344 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LIM2P55344 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LIM2P55344 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LIM2P55344 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
LIM2P55344 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LIM2P55344 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LIM2P55344 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LIM2P55344 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LIM2P55344 AP000542.2-201ENST00000623199 6179 ntBASIC4.54□□□□□ -1.68
LIM2P55344 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
LIM2P55344 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
LIM2P55344 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
LIM2P55344 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.53□□□□□ -1.68
LIM2P55344 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.53□□□□□ -1.68
LIM2P55344 AC132825.1-201ENST00000463573 2247 ntBASIC4.53□□□□□ -1.68
LIM2P55344 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LIM2P55344 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LIM2P55344 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.53□□□□□ -1.68
LIM2P55344 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LIM2P55344 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LIM2P55344 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LIM2P55344 GAPDHP15-201ENST00000398586 975 ntBASIC4.53□□□□□ -1.68
LIM2P55344 AP000580.1-201ENST00000404439 358 ntBASIC4.53□□□□□ -1.68
LIM2P55344 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.53□□□□□ -1.68
LIM2P55344 U3.35-201ENST00000408405 208 ntBASIC4.53□□□□□ -1.68
LIM2P55344 RNA5SP113-201ENST00000410486 84 ntBASIC4.53□□□□□ -1.68
LIM2P55344 E2F6P2-201ENST00000420708 748 ntBASIC4.53□□□□□ -1.68
LIM2P55344 ARAFP1-201ENST00000422172 605 ntBASIC4.53□□□□□ -1.68
LIM2P55344 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.53□□□□□ -1.68
LIM2P55344 AC073648.4-201ENST00000442655 781 ntBASIC4.53□□□□□ -1.68
LIM2P55344 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.53□□□□□ -1.68
LIM2P55344 OR1H1P-201ENST00000448731 937 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms