Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AC040958.1-201ENST00000561102 201 ntBASIC5.43□□□□□ -1.54
HMGCS2P54868 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.43□□□□□ -1.54
HMGCS2P54868 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.43□□□□□ -1.54
HMGCS2P54868 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.43□□□□□ -1.54
HMGCS2P54868 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.43□□□□□ -1.54
HMGCS2P54868 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.43□□□□□ -1.54
HMGCS2P54868 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.43□□□□□ -1.54
HMGCS2P54868 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.43□□□□□ -1.54
HMGCS2P54868 UGT2B26P-201ENST00000508672 1613 ntBASIC5.43□□□□□ -1.54
HMGCS2P54868 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HMGCS2P54868 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC5.43□□□□□ -1.54
HMGCS2P54868 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.43□□□□□ -1.54
HMGCS2P54868 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
HMGCS2P54868 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HMGCS2P54868 AP001029.2-203ENST00000589795 4910 ntBASIC5.43□□□□□ -1.54
HMGCS2P54868 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HMGCS2P54868 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
HMGCS2P54868 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HMGCS2P54868 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.42□□□□□ -1.54
HMGCS2P54868 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.42□□□□□ -1.54
HMGCS2P54868 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HMGCS2P54868 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
HMGCS2P54868 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
HMGCS2P54868 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
HMGCS2P54868 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
HMGCS2P54868 RNA5SP515-201ENST00000364570 118 ntBASIC5.42□□□□□ -1.54
HMGCS2P54868 OR6C69P-201ENST00000394268 893 ntBASIC5.42□□□□□ -1.54
HMGCS2P54868 RPL23AP59-201ENST00000399415 461 ntBASIC5.42□□□□□ -1.54
HMGCS2P54868 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.42□□□□□ -1.54
HMGCS2P54868 NDUFA5P1-201ENST00000433858 341 ntBASIC5.42□□□□□ -1.54
HMGCS2P54868 FTH1P16-201ENST00000435241 552 ntBASIC5.42□□□□□ -1.54
HMGCS2P54868 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.42□□□□□ -1.54
HMGCS2P54868 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.42□□□□□ -1.54
HMGCS2P54868 AL356981.1-201ENST00000454879 684 ntBASIC5.42□□□□□ -1.54
HMGCS2P54868 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HMGCS2P54868 AC026402.1-201ENST00000513642 170 ntBASIC5.42□□□□□ -1.54
HMGCS2P54868 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.42□□□□□ -1.54
HMGCS2P54868 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.42□□□□□ -1.54
HMGCS2P54868 OR8G5-201ENST00000524943 1041 ntBASIC5.42□□□□□ -1.54
HMGCS2P54868 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC5.42□□□□□ -1.54
HMGCS2P54868 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC5.42□□□□□ -1.54
HMGCS2P54868 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HMGCS2P54868 HMGN2P47-201ENST00000559378 272 ntBASIC5.42□□□□□ -1.54
HMGCS2P54868 MIR3160-1-201ENST00000577972 85 ntBASIC5.42□□□□□ -1.54
HMGCS2P54868 AC090948.1-201ENST00000607464 549 ntBASIC5.42□□□□□ -1.54
HMGCS2P54868 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.42□□□□□ -1.54
HMGCS2P54868 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HMGCS2P54868 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HMGCS2P54868 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.42□□□□□ -1.54
HMGCS2P54868 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.42□□□□□ -1.54
HMGCS2P54868 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HMGCS2P54868 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HMGCS2P54868 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.41□□□□□ -1.54
HMGCS2P54868 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
HMGCS2P54868 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
HMGCS2P54868 ZFRP1-201ENST00000457579 2970 ntBASIC5.41□□□□□ -1.54
HMGCS2P54868 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HMGCS2P54868 AC116158.1-201ENST00000560231 2129 ntBASIC5.41□□□□□ -1.54
HMGCS2P54868 AL731566.1-201ENST00000620490 1937 ntBASIC5.41□□□□□ -1.54
HMGCS2P54868 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
HMGCS2P54868 AL050305.1-201ENST00000399993 1230 ntBASIC5.41□□□□□ -1.54
HMGCS2P54868 SNX10-203ENST00000409367 746 ntTSL 5 BASIC5.41□□□□□ -1.54
HMGCS2P54868 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC5.41□□□□□ -1.54
HMGCS2P54868 SEPT14P1-201ENST00000458703 648 ntBASIC5.41□□□□□ -1.54
HMGCS2P54868 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
HMGCS2P54868 AC015795.1-201ENST00000513669 327 ntBASIC5.41□□□□□ -1.54
HMGCS2P54868 NPM1P6-201ENST00000521088 871 ntBASIC5.41□□□□□ -1.54
HMGCS2P54868 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC5.41□□□□□ -1.54
HMGCS2P54868 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.41□□□□□ -1.54
HMGCS2P54868 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.41□□□□□ -1.54
HMGCS2P54868 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
HMGCS2P54868 MIR4433B-201ENST00000581329 102 ntBASIC5.41□□□□□ -1.54
HMGCS2P54868 MIR3138-201ENST00000585238 82 ntBASIC5.41□□□□□ -1.54
HMGCS2P54868 AC006453.5-201ENST00000636451 619 ntBASIC5.41□□□□□ -1.54
HMGCS2P54868 AP001153.1-201ENST00000641024 338 ntBASIC5.41□□□□□ -1.54
HMGCS2P54868 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
HMGCS2P54868 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.41□□□□□ -1.54
HMGCS2P54868 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HMGCS2P54868 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.41□□□□□ -1.54
HMGCS2P54868 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.41□□□□□ -1.54
HMGCS2P54868 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.41□□□□□ -1.54
HMGCS2P54868 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
HMGCS2P54868 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.41□□□□□ -1.54
HMGCS2P54868 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HMGCS2P54868 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HMGCS2P54868 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
HMGCS2P54868 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
HMGCS2P54868 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.4□□□□□ -1.54
HMGCS2P54868 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.4□□□□□ -1.54
HMGCS2P54868 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
HMGCS2P54868 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
HMGCS2P54868 Z98745.1-201ENST00000402553 494 ntBASIC5.4□□□□□ -1.54
HMGCS2P54868 AL356387.2-201ENST00000422272 243 ntBASIC5.4□□□□□ -1.54
HMGCS2P54868 AC012519.1-201ENST00000424588 610 ntBASIC5.4□□□□□ -1.54
HMGCS2P54868 MRPL35P2-201ENST00000448009 511 ntBASIC5.4□□□□□ -1.54
HMGCS2P54868 CYCSP34-201ENST00000458172 304 ntBASIC5.4□□□□□ -1.54
HMGCS2P54868 RPL7AP28-201ENST00000464513 571 ntBASIC5.4□□□□□ -1.54
HMGCS2P54868 AC090142.1-201ENST00000465776 462 ntBASIC5.4□□□□□ -1.54
HMGCS2P54868 AC112184.1-201ENST00000505179 312 ntBASIC5.4□□□□□ -1.54
HMGCS2P54868 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms