Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AL451074.6-201ENST00000608512 729 ntBASIC6.25□□□□□ -1.41
EPHB3P54753 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC6.25□□□□□ -1.41
EPHB3P54753 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC6.25□□□□□ -1.41
EPHB3P54753 Z99129.1-201ENST00000612510 255 ntBASIC6.25□□□□□ -1.41
EPHB3P54753 AL139099.4-201ENST00000614802 114 ntBASIC6.25□□□□□ -1.41
EPHB3P54753 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
EPHB3P54753 AC015660.5-201ENST00000623238 564 ntBASIC6.25□□□□□ -1.41
EPHB3P54753 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.25□□□□□ -1.41
EPHB3P54753 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.25□□□□□ -1.41
EPHB3P54753 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC6.25□□□□□ -1.41
EPHB3P54753 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
EPHB3P54753 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
EPHB3P54753 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
EPHB3P54753 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
EPHB3P54753 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
EPHB3P54753 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
EPHB3P54753 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.25□□□□□ -1.41
EPHB3P54753 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
EPHB3P54753 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
EPHB3P54753 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
EPHB3P54753 PABPC1P8-201ENST00000452851 2086 ntBASIC6.24□□□□□ -1.41
EPHB3P54753 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.24□□□□□ -1.41
EPHB3P54753 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.24□□□□□ -1.41
EPHB3P54753 CUL4AP1-201ENST00000514750 1863 ntBASIC6.24□□□□□ -1.41
EPHB3P54753 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
EPHB3P54753 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
EPHB3P54753 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
EPHB3P54753 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
EPHB3P54753 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
EPHB3P54753 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.24□□□□□ -1.41
EPHB3P54753 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.24□□□□□ -1.41
EPHB3P54753 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
EPHB3P54753 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
EPHB3P54753 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
EPHB3P54753 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
EPHB3P54753 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
EPHB3P54753 FUNDC2P3-201ENST00000334716 533 ntBASIC6.24□□□□□ -1.41
EPHB3P54753 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
EPHB3P54753 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
EPHB3P54753 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
EPHB3P54753 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.24□□□□□ -1.41
EPHB3P54753 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
EPHB3P54753 ATP5F1P4-201ENST00000397288 746 ntBASIC6.24□□□□□ -1.41
EPHB3P54753 RN7SKP142-201ENST00000411236 328 ntBASIC6.24□□□□□ -1.41
EPHB3P54753 RN7SKP293-201ENST00000411389 296 ntBASIC6.24□□□□□ -1.41
EPHB3P54753 BTF3P8-201ENST00000414577 526 ntBASIC6.24□□□□□ -1.41
EPHB3P54753 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC6.24□□□□□ -1.41
EPHB3P54753 CCDC58P2-201ENST00000417131 366 ntBASIC6.24□□□□□ -1.41
EPHB3P54753 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC6.24□□□□□ -1.41
EPHB3P54753 AC007562.1-201ENST00000421819 517 ntBASIC6.24□□□□□ -1.41
EPHB3P54753 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
EPHB3P54753 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.24□□□□□ -1.41
EPHB3P54753 AC099677.3-201ENST00000427081 395 ntBASIC6.24□□□□□ -1.41
EPHB3P54753 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.24□□□□□ -1.41
EPHB3P54753 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC6.24□□□□□ -1.41
EPHB3P54753 AC023274.2-201ENST00000445264 521 ntBASIC6.24□□□□□ -1.41
EPHB3P54753 WASF1P1-201ENST00000447560 1131 ntBASIC6.24□□□□□ -1.41
EPHB3P54753 AL627224.1-201ENST00000448334 444 ntBASIC6.24□□□□□ -1.41
EPHB3P54753 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC6.24□□□□□ -1.41
EPHB3P54753 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC6.24□□□□□ -1.41
EPHB3P54753 AC093392.2-201ENST00000450682 337 ntBASIC6.24□□□□□ -1.41
EPHB3P54753 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.24□□□□□ -1.41
EPHB3P54753 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.24□□□□□ -1.41
EPHB3P54753 RPSAP39-201ENST00000467439 883 ntBASIC6.24□□□□□ -1.41
EPHB3P54753 AC022336.1-201ENST00000475510 337 ntBASIC6.24□□□□□ -1.41
EPHB3P54753 AL024509.2-201ENST00000493462 493 ntBASIC6.24□□□□□ -1.41
EPHB3P54753 FCF1P3-201ENST00000496394 590 ntBASIC6.24□□□□□ -1.41
EPHB3P54753 AC023050.1-201ENST00000498198 304 ntBASIC6.24□□□□□ -1.41
EPHB3P54753 AK4P6-201ENST00000505168 528 ntBASIC6.24□□□□□ -1.41
EPHB3P54753 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC6.24□□□□□ -1.41
EPHB3P54753 GTF2F2P1-201ENST00000511083 675 ntBASIC6.24□□□□□ -1.41
EPHB3P54753 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.24□□□□□ -1.41
EPHB3P54753 RPL7L1P4-201ENST00000513004 707 ntBASIC6.24□□□□□ -1.41
EPHB3P54753 RNU6-405P-201ENST00000516637 110 ntBASIC6.24□□□□□ -1.41
EPHB3P54753 HMGN2P36-201ENST00000529541 409 ntBASIC6.24□□□□□ -1.41
EPHB3P54753 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC6.24□□□□□ -1.41
EPHB3P54753 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC6.24□□□□□ -1.41
EPHB3P54753 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC6.24□□□□□ -1.41
EPHB3P54753 NMNAT1P5-201ENST00000559657 841 ntBASIC6.24□□□□□ -1.41
EPHB3P54753 NPM1P47-201ENST00000560843 856 ntBASIC6.24□□□□□ -1.41
EPHB3P54753 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC6.24□□□□□ -1.41
EPHB3P54753 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.24□□□□□ -1.41
EPHB3P54753 LSM1P2-201ENST00000604911 322 ntBASIC6.24□□□□□ -1.41
EPHB3P54753 AC090186.1-201ENST00000605991 572 ntBASIC6.24□□□□□ -1.41
EPHB3P54753 AC107075.1-201ENST00000613695 314 ntBASIC6.24□□□□□ -1.41
EPHB3P54753 AL049767.1-202ENST00000637826 242 ntBASIC6.24□□□□□ -1.41
EPHB3P54753 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
EPHB3P54753 AL359715.4-201ENST00000606629 1436 ntBASIC6.24□□□□□ -1.41
EPHB3P54753 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
EPHB3P54753 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
EPHB3P54753 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.24□□□□□ -1.41
EPHB3P54753 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
EPHB3P54753 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.23□□□□□ -1.41
EPHB3P54753 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
EPHB3P54753 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
EPHB3P54753 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.23□□□□□ -1.41
EPHB3P54753 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.23□□□□□ -1.41
EPHB3P54753 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
EPHB3P54753 AC087359.1-201ENST00000508335 1740 ntBASIC6.23□□□□□ -1.41
EPHB3P54753 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms