Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
COPB1P53618 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
COPB1P53618 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.67□□□□□ -1.5
COPB1P53618 MRRFP1-201ENST00000435941 1675 ntBASIC5.67□□□□□ -1.5
COPB1P53618 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
COPB1P53618 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.67□□□□□ -1.5
COPB1P53618 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
COPB1P53618 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.67□□□□□ -1.5
COPB1P53618 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.67□□□□□ -1.5
COPB1P53618 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
COPB1P53618 HMGB3P19-201ENST00000403971 560 ntBASIC5.67□□□□□ -1.5
COPB1P53618 AC241520.1-201ENST00000422654 1099 ntBASIC5.67□□□□□ -1.5
COPB1P53618 VN1R42P-201ENST00000424651 344 ntBASIC5.67□□□□□ -1.5
COPB1P53618 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.67□□□□□ -1.5
COPB1P53618 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.67□□□□□ -1.5
COPB1P53618 CETN4P-201ENST00000432407 469 ntBASIC5.67□□□□□ -1.5
COPB1P53618 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.67□□□□□ -1.5
COPB1P53618 AL157884.3-201ENST00000448273 1184 ntBASIC5.67□□□□□ -1.5
COPB1P53618 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC5.67□□□□□ -1.5
COPB1P53618 RPS27AP2-201ENST00000457576 465 ntBASIC5.67□□□□□ -1.5
COPB1P53618 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
COPB1P53618 EIF1P7-201ENST00000487533 337 ntBASIC5.67□□□□□ -1.5
COPB1P53618 OR5H3P-201ENST00000502817 919 ntBASIC5.67□□□□□ -1.5
COPB1P53618 GOLGA5P1-201ENST00000507317 980 ntBASIC5.67□□□□□ -1.5
COPB1P53618 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC5.67□□□□□ -1.5
COPB1P53618 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC5.67□□□□□ -1.5
COPB1P53618 ATP5LP3-201ENST00000514223 304 ntBASIC5.67□□□□□ -1.5
COPB1P53618 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC5.67□□□□□ -1.5
COPB1P53618 RNU6-941P-201ENST00000516346 108 ntBASIC5.67□□□□□ -1.5
COPB1P53618 RN7SKP287-201ENST00000516546 266 ntBASIC5.67□□□□□ -1.5
COPB1P53618 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.67□□□□□ -1.5
COPB1P53618 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.67□□□□□ -1.5
COPB1P53618 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.67□□□□□ -1.5
COPB1P53618 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC5.67□□□□□ -1.5
COPB1P53618 MTND3P12-201ENST00000559068 328 ntBASIC5.67□□□□□ -1.5
COPB1P53618 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
COPB1P53618 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.67□□□□□ -1.5
COPB1P53618 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.67□□□□□ -1.5
COPB1P53618 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5.67□□□□□ -1.5
COPB1P53618 AC025811.1-201ENST00000604312 472 ntBASIC5.67□□□□□ -1.5
COPB1P53618 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.67□□□□□ -1.5
COPB1P53618 AL592494.3-201ENST00000609485 464 ntBASIC5.67□□□□□ -1.5
COPB1P53618 RNU6-1192P-201ENST00000612197 107 ntBASIC5.67□□□□□ -1.5
COPB1P53618 RNU6-489P-201ENST00000618289 107 ntBASIC5.67□□□□□ -1.5
COPB1P53618 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.67□□□□□ -1.5
COPB1P53618 AC006963.1-201ENST00000624003 1052 ntBASIC5.67□□□□□ -1.5
COPB1P53618 AL691477.1-201ENST00000624398 162 ntBASIC5.67□□□□□ -1.5
COPB1P53618 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC5.67□□□□□ -1.5
COPB1P53618 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
COPB1P53618 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.67□□□□□ -1.5
COPB1P53618 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
COPB1P53618 AC093849.1-201ENST00000563631 2209 ntBASIC5.67□□□□□ -1.5
COPB1P53618 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
COPB1P53618 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.67□□□□□ -1.5
COPB1P53618 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.67□□□□□ -1.5
COPB1P53618 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
COPB1P53618 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
COPB1P53618 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
COPB1P53618 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.67□□□□□ -1.5
COPB1P53618 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
COPB1P53618 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
COPB1P53618 OR55B1P-203ENST00000641518 2602 ntBASIC5.66□□□□□ -1.5
COPB1P53618 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.66□□□□□ -1.5
COPB1P53618 CR382285.2-201ENST00000624662 1495 ntBASIC5.66□□□□□ -1.5
COPB1P53618 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
COPB1P53618 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
COPB1P53618 U3.3-201ENST00000362986 216 ntBASIC5.66□□□□□ -1.5
COPB1P53618 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
COPB1P53618 OR3A2-201ENST00000408891 1076 ntBASIC5.66□□□□□ -1.5
COPB1P53618 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.66□□□□□ -1.5
COPB1P53618 NANOGP4-201ENST00000427230 913 ntBASIC5.66□□□□□ -1.5
COPB1P53618 FO393414.1-201ENST00000428697 1184 ntBASIC5.66□□□□□ -1.5
COPB1P53618 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.66□□□□□ -1.5
COPB1P53618 AC092447.2-201ENST00000435487 669 ntBASIC5.66□□□□□ -1.5
COPB1P53618 AP000281.1-201ENST00000444036 316 ntBASIC5.66□□□□□ -1.5
COPB1P53618 BTF3P6-201ENST00000448054 499 ntBASIC5.66□□□□□ -1.5
COPB1P53618 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC5.66□□□□□ -1.5
COPB1P53618 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.66□□□□□ -1.5
COPB1P53618 HMGB1P26-201ENST00000452520 628 ntBASIC5.66□□□□□ -1.5
COPB1P53618 AC100832.1-201ENST00000471945 383 ntBASIC5.66□□□□□ -1.5
COPB1P53618 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.66□□□□□ -1.5
COPB1P53618 AC008638.1-201ENST00000506035 866 ntBASIC5.66□□□□□ -1.5
COPB1P53618 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.66□□□□□ -1.5
COPB1P53618 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC5.66□□□□□ -1.5
COPB1P53618 AC105031.1-201ENST00000518550 476 ntBASIC5.66□□□□□ -1.5
COPB1P53618 IGKV2-18-201ENST00000522607 343 ntBASIC5.66□□□□□ -1.5
COPB1P53618 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.66□□□□□ -1.5
COPB1P53618 VBP1-203ENST00000535916 944 ntTSL 2 BASIC5.66□□□□□ -1.5
COPB1P53618 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
COPB1P53618 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.66□□□□□ -1.5
COPB1P53618 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC5.66□□□□□ -1.5
COPB1P53618 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC5.66□□□□□ -1.5
COPB1P53618 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
COPB1P53618 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.66□□□□□ -1.5
COPB1P53618 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC5.66□□□□□ -1.5
COPB1P53618 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
COPB1P53618 AC124283.4-201ENST00000581815 456 ntBASIC5.66□□□□□ -1.5
COPB1P53618 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC5.66□□□□□ -1.5
COPB1P53618 AC005034.4-201ENST00000603612 899 ntBASIC5.66□□□□□ -1.5
COPB1P53618 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms