Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.48□□□□□ -1.37
MRE11P49959 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC6.48□□□□□ -1.37
MRE11P49959 AL035461.2-201ENST00000619201 524 ntBASIC6.48□□□□□ -1.37
MRE11P49959 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC6.48□□□□□ -1.37
MRE11P49959 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.48□□□□□ -1.37
MRE11P49959 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
MRE11P49959 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
MRE11P49959 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
MRE11P49959 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC6.48□□□□□ -1.37
MRE11P49959 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
MRE11P49959 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
MRE11P49959 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
MRE11P49959 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
MRE11P49959 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
MRE11P49959 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
MRE11P49959 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
MRE11P49959 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.47□□□□□ -1.37
MRE11P49959 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
MRE11P49959 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC6.47□□□□□ -1.37
MRE11P49959 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.47□□□□□ -1.37
MRE11P49959 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
MRE11P49959 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
MRE11P49959 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
MRE11P49959 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
MRE11P49959 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC6.47□□□□□ -1.37
MRE11P49959 SNORA48.4-201ENST00000391089 134 ntBASIC6.47□□□□□ -1.37
MRE11P49959 ST13P16-201ENST00000401760 781 ntBASIC6.47□□□□□ -1.37
MRE11P49959 RN7SKP97-201ENST00000410966 333 ntBASIC6.47□□□□□ -1.37
MRE11P49959 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.47□□□□□ -1.37
MRE11P49959 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
MRE11P49959 PRUNEP1-201ENST00000425846 705 ntBASIC6.47□□□□□ -1.37
MRE11P49959 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC6.47□□□□□ -1.37
MRE11P49959 HIGD1AP4-201ENST00000430194 280 ntBASIC6.47□□□□□ -1.37
MRE11P49959 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC6.47□□□□□ -1.37
MRE11P49959 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC6.47□□□□□ -1.37
MRE11P49959 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC6.47□□□□□ -1.37
MRE11P49959 ZNF619P1-201ENST00000446539 752 ntBASIC6.47□□□□□ -1.37
MRE11P49959 AC007537.2-201ENST00000472093 511 ntBASIC6.47□□□□□ -1.37
MRE11P49959 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
MRE11P49959 CYCSP20-201ENST00000473154 315 ntBASIC6.47□□□□□ -1.37
MRE11P49959 AC108693.1-201ENST00000496068 432 ntBASIC6.47□□□□□ -1.37
MRE11P49959 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.47□□□□□ -1.37
MRE11P49959 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC6.47□□□□□ -1.37
MRE11P49959 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC6.47□□□□□ -1.37
MRE11P49959 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC6.47□□□□□ -1.37
MRE11P49959 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.47□□□□□ -1.37
MRE11P49959 AC093770.1-201ENST00000511559 571 ntBASIC6.47□□□□□ -1.37
MRE11P49959 RNA5SP206-201ENST00000516703 121 ntBASIC6.47□□□□□ -1.37
MRE11P49959 MRPS36P3-201ENST00000519284 130 ntBASIC6.47□□□□□ -1.37
MRE11P49959 AP003033.1-201ENST00000527244 415 ntBASIC6.47□□□□□ -1.37
MRE11P49959 AC027369.5-201ENST00000533838 755 ntBASIC6.47□□□□□ -1.37
MRE11P49959 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
MRE11P49959 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.47□□□□□ -1.37
MRE11P49959 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
MRE11P49959 RPA2P1-201ENST00000556557 721 ntBASIC6.47□□□□□ -1.37
MRE11P49959 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC6.47□□□□□ -1.37
MRE11P49959 AC010547.7-201ENST00000570323 333 ntBASIC6.47□□□□□ -1.37
MRE11P49959 AC016839.1-201ENST00000578162 867 ntBASIC6.47□□□□□ -1.37
MRE11P49959 AC124283.4-201ENST00000581815 456 ntBASIC6.47□□□□□ -1.37
MRE11P49959 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC6.47□□□□□ -1.37
MRE11P49959 AL139344.1-201ENST00000605228 195 ntBASIC6.47□□□□□ -1.37
MRE11P49959 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.47□□□□□ -1.37
MRE11P49959 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC6.47□□□□□ -1.37
MRE11P49959 AL691477.1-201ENST00000624398 162 ntBASIC6.47□□□□□ -1.37
MRE11P49959 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC6.47□□□□□ -1.37
MRE11P49959 AC083865.1-201ENST00000636634 831 ntBASIC6.47□□□□□ -1.37
MRE11P49959 AP001642.1-201ENST00000624727 2117 ntBASIC6.47□□□□□ -1.37
MRE11P49959 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
MRE11P49959 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
MRE11P49959 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
MRE11P49959 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
MRE11P49959 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
MRE11P49959 AC068870.3-201ENST00000625077 2536 ntBASIC6.46□□□□□ -1.37
MRE11P49959 AC011503.2-201ENST00000594230 1500 ntBASIC6.46□□□□□ -1.37
MRE11P49959 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC6.46□□□□□ -1.37
MRE11P49959 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
MRE11P49959 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
MRE11P49959 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
MRE11P49959 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
MRE11P49959 AL356317.1-201ENST00000396110 1436 ntBASIC6.46□□□□□ -1.38
MRE11P49959 RPL21P67-201ENST00000402896 478 ntBASIC6.46□□□□□ -1.38
MRE11P49959 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
MRE11P49959 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC6.46□□□□□ -1.38
MRE11P49959 AC016907.1-201ENST00000419483 435 ntBASIC6.46□□□□□ -1.38
MRE11P49959 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC6.46□□□□□ -1.38
MRE11P49959 RPL34P6-201ENST00000432390 345 ntBASIC6.46□□□□□ -1.38
MRE11P49959 TMEM183AP1-205ENST00000432739 290 ntBASIC6.46□□□□□ -1.38
MRE11P49959 AC091390.1-201ENST00000433904 331 ntBASIC6.46□□□□□ -1.38
MRE11P49959 ARF4P4-201ENST00000439608 520 ntBASIC6.46□□□□□ -1.38
MRE11P49959 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC6.46□□□□□ -1.38
MRE11P49959 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC6.46□□□□□ -1.38
MRE11P49959 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
MRE11P49959 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC6.46□□□□□ -1.38
MRE11P49959 AL590004.3-202ENST00000445883 451 ntBASIC6.46□□□□□ -1.38
MRE11P49959 AC004022.1-201ENST00000447766 1066 ntBASIC6.46□□□□□ -1.38
MRE11P49959 AC090804.1-201ENST00000448870 490 ntBASIC6.46□□□□□ -1.38
MRE11P49959 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.46□□□□□ -1.38
MRE11P49959 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC6.46□□□□□ -1.38
MRE11P49959 OFD1P7Y-201ENST00000454643 1155 ntBASIC6.46□□□□□ -1.38
MRE11P49959 RN7SL188P-201ENST00000469842 285 ntBASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 140.3 ms