Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 EIF4A1P11-201ENST00000451239 222 ntBASIC5.02□□□□□ -1.61
CENPAP49450 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.02□□□□□ -1.61
CENPAP49450 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC5.02□□□□□ -1.61
CENPAP49450 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.02□□□□□ -1.61
CENPAP49450 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CENPAP49450 RN7SKP253-201ENST00000516424 309 ntBASIC5.02□□□□□ -1.61
CENPAP49450 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.02□□□□□ -1.61
CENPAP49450 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC5.02□□□□□ -1.61
CENPAP49450 HMGB1P42-201ENST00000532126 553 ntBASIC5.02□□□□□ -1.61
CENPAP49450 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CENPAP49450 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.02□□□□□ -1.61
CENPAP49450 AC026826.3-201ENST00000561747 158 ntBASIC5.02□□□□□ -1.61
CENPAP49450 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC5.02□□□□□ -1.61
CENPAP49450 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.02□□□□□ -1.61
CENPAP49450 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.02□□□□□ -1.61
CENPAP49450 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.02□□□□□ -1.61
CENPAP49450 RPP40P2-201ENST00000603596 712 ntBASIC5.02□□□□□ -1.61
CENPAP49450 AL445435.1-201ENST00000604232 665 ntBASIC5.02□□□□□ -1.61
CENPAP49450 AL359091.2-201ENST00000609303 556 ntBASIC5.02□□□□□ -1.61
CENPAP49450 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.02□□□□□ -1.61
CENPAP49450 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.02□□□□□ -1.61
CENPAP49450 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.02□□□□□ -1.61
CENPAP49450 LINC00901.1-201ENST00000617252 152 ntBASIC5.02□□□□□ -1.61
CENPAP49450 AC145207.9-201ENST00000623802 325 ntBASIC5.02□□□□□ -1.61
CENPAP49450 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.02□□□□□ -1.61
CENPAP49450 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC5.02□□□□□ -1.61
CENPAP49450 OR51H2P-202ENST00000641424 3046 ntBASIC5.02□□□□□ -1.61
CENPAP49450 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CENPAP49450 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CENPAP49450 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.02□□□□□ -1.61
CENPAP49450 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.02□□□□□ -1.61
CENPAP49450 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
CENPAP49450 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.02□□□□□ -1.61
CENPAP49450 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.02□□□□□ -1.61
CENPAP49450 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CENPAP49450 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
CENPAP49450 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
CENPAP49450 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.01□□□□□ -1.61
CENPAP49450 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
CENPAP49450 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CENPAP49450 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CENPAP49450 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
CENPAP49450 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.01□□□□□ -1.61
CENPAP49450 IFIT1P1-201ENST00000400497 1449 ntBASIC5.01□□□□□ -1.61
CENPAP49450 RNA5SP477-201ENST00000362639 119 ntBASIC5.01□□□□□ -1.61
CENPAP49450 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CENPAP49450 SUGT1P2-201ENST00000379452 992 ntBASIC5.01□□□□□ -1.61
CENPAP49450 SNORA11.5-201ENST00000408163 128 ntBASIC5.01□□□□□ -1.61
CENPAP49450 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC5.01□□□□□ -1.61
CENPAP49450 TEX41-203ENST00000420472 765 ntTSL 3 BASIC5.01□□□□□ -1.61
CENPAP49450 AL358176.3-201ENST00000420757 454 ntBASIC5.01□□□□□ -1.61
CENPAP49450 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC5.01□□□□□ -1.61
CENPAP49450 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
CENPAP49450 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC5.01□□□□□ -1.61
CENPAP49450 AC009784.1-201ENST00000426484 460 ntBASIC5.01□□□□□ -1.61
CENPAP49450 AC073465.2-201ENST00000440938 498 ntBASIC5.01□□□□□ -1.61
CENPAP49450 FHP1-201ENST00000442741 703 ntBASIC5.01□□□□□ -1.61
CENPAP49450 GEMIN8P3-201ENST00000445417 720 ntBASIC5.01□□□□□ -1.61
CENPAP49450 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.01□□□□□ -1.61
CENPAP49450 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC5.01□□□□□ -1.61
CENPAP49450 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC5.01□□□□□ -1.61
CENPAP49450 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.01□□□□□ -1.61
CENPAP49450 AC022215.1-201ENST00000481770 362 ntBASIC5.01□□□□□ -1.61
CENPAP49450 RPS3AP15-201ENST00000483874 781 ntBASIC5.01□□□□□ -1.61
CENPAP49450 AL117692.1-201ENST00000494283 713 ntBASIC5.01□□□□□ -1.61
CENPAP49450 AC025458.1-201ENST00000506046 166 ntBASIC5.01□□□□□ -1.61
CENPAP49450 RNU6-1004P-201ENST00000516584 111 ntBASIC5.01□□□□□ -1.61
CENPAP49450 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.01□□□□□ -1.61
CENPAP49450 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.01□□□□□ -1.61
CENPAP49450 OR8G5-201ENST00000524943 1041 ntBASIC5.01□□□□□ -1.61
CENPAP49450 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.01□□□□□ -1.61
CENPAP49450 OR5AM1P-201ENST00000532136 1032 ntBASIC5.01□□□□□ -1.61
CENPAP49450 AC022882.1-201ENST00000532142 501 ntBASIC5.01□□□□□ -1.61
CENPAP49450 ZNF971P-201ENST00000562068 1249 ntBASIC5.01□□□□□ -1.61
CENPAP49450 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.01□□□□□ -1.61
CENPAP49450 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.01□□□□□ -1.61
CENPAP49450 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.01□□□□□ -1.61
CENPAP49450 MIR3936-201ENST00000584304 110 ntBASIC5.01□□□□□ -1.61
CENPAP49450 MIR7109-201ENST00000613748 65 ntBASIC5.01□□□□□ -1.61
CENPAP49450 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.01□□□□□ -1.61
CENPAP49450 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CENPAP49450 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.01□□□□□ -1.61
CENPAP49450 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
CENPAP49450 NEAT1-202ENST00000501122 22743 ntBASIC5.01□□□□□ -1.61
CENPAP49450 AP001273.1-201ENST00000624493 3152 ntBASIC5.01□□□□□ -1.61
CENPAP49450 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
CENPAP49450 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.01□□□□□ -1.61
CENPAP49450 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC5.01□□□□□ -1.61
CENPAP49450 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
CENPAP49450 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.01□□□□□ -1.61
CENPAP49450 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
CENPAP49450 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5□□□□□ -1.61
CENPAP49450 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5□□□□□ -1.61
CENPAP49450 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5□□□□□ -1.61
CENPAP49450 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5□□□□□ -1.61
CENPAP49450 OR14L1P-202ENST00000641545 3009 ntBASIC5□□□□□ -1.61
CENPAP49450 AC091046.3-201ENST00000631455 1574 ntBASIC5□□□□□ -1.61
CENPAP49450 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5□□□□□ -1.61
CENPAP49450 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
CENPAP49450 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 130.9 ms