Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.44□□□□□ -1.7
CDX1P47902 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC4.44□□□□□ -1.7
CDX1P47902 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC4.44□□□□□ -1.7
CDX1P47902 LINC02210-201ENST00000444561 288 ntBASIC4.44□□□□□ -1.7
CDX1P47902 TPMTP4-201ENST00000450749 678 ntBASIC4.44□□□□□ -1.7
CDX1P47902 PRPF38AP1-201ENST00000451976 933 ntBASIC4.44□□□□□ -1.7
CDX1P47902 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.44□□□□□ -1.7
CDX1P47902 RPS6P2-201ENST00000454208 705 ntBASIC4.44□□□□□ -1.7
CDX1P47902 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.44□□□□□ -1.7
CDX1P47902 AC011225.1-201ENST00000457751 369 ntBASIC4.44□□□□□ -1.7
CDX1P47902 PPIAP21-201ENST00000464473 501 ntBASIC4.44□□□□□ -1.7
CDX1P47902 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
CDX1P47902 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
CDX1P47902 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC4.44□□□□□ -1.7
CDX1P47902 RPL7P40-201ENST00000481703 745 ntBASIC4.44□□□□□ -1.7
CDX1P47902 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.44□□□□□ -1.7
CDX1P47902 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC4.44□□□□□ -1.7
CDX1P47902 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CDX1P47902 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.44□□□□□ -1.7
CDX1P47902 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC4.44□□□□□ -1.7
CDX1P47902 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC4.44□□□□□ -1.7
CDX1P47902 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.44□□□□□ -1.7
CDX1P47902 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.44□□□□□ -1.7
CDX1P47902 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC4.44□□□□□ -1.7
CDX1P47902 MRPS16P1-201ENST00000523462 412 ntBASIC4.44□□□□□ -1.7
CDX1P47902 IGLV3-30-201ENST00000524362 298 ntBASIC4.44□□□□□ -1.7
CDX1P47902 AP000916.1-201ENST00000533869 835 ntBASIC4.44□□□□□ -1.7
CDX1P47902 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.44□□□□□ -1.7
CDX1P47902 GLRXP2-201ENST00000555594 321 ntBASIC4.44□□□□□ -1.7
CDX1P47902 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.44□□□□□ -1.7
CDX1P47902 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.44□□□□□ -1.7
CDX1P47902 AP005229.2-201ENST00000609980 697 ntBASIC4.44□□□□□ -1.7
CDX1P47902 AC008115.3-201ENST00000614874 549 ntBASIC4.44□□□□□ -1.7
CDX1P47902 AC025574.2-201ENST00000615621 514 ntBASIC4.44□□□□□ -1.7
CDX1P47902 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.44□□□□□ -1.7
CDX1P47902 CU639417.4-201ENST00000623928 207 ntBASIC4.44□□□□□ -1.7
CDX1P47902 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.44□□□□□ -1.7
CDX1P47902 AL049767.1-202ENST00000637826 242 ntBASIC4.44□□□□□ -1.7
CDX1P47902 OR2L1P-202ENST00000641567 1023 ntBASIC4.44□□□□□ -1.7
CDX1P47902 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
CDX1P47902 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.44□□□□□ -1.7
CDX1P47902 MUC2-202ENST00000613187 4845 ntBASIC4.44□□□□□ -1.7
CDX1P47902 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.44□□□□□ -1.7
CDX1P47902 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.44□□□□□ -1.7
CDX1P47902 AL133268.1-201ENST00000405676 1401 ntBASIC4.44□□□□□ -1.7
CDX1P47902 AP001273.1-201ENST00000624493 3152 ntBASIC4.44□□□□□ -1.7
CDX1P47902 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC4.44□□□□□ -1.7
CDX1P47902 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CDX1P47902 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CDX1P47902 MAPK6PS2-201ENST00000379571 2060 ntBASIC4.44□□□□□ -1.7
CDX1P47902 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
CDX1P47902 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.44□□□□□ -1.7
CDX1P47902 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CDX1P47902 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CDX1P47902 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CDX1P47902 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CDX1P47902 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
CDX1P47902 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CDX1P47902 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
CDX1P47902 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CDX1P47902 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC4.43□□□□□ -1.7
CDX1P47902 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CDX1P47902 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CDX1P47902 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.43□□□□□ -1.7
CDX1P47902 MFSD8-239ENST00000641590 2479 ntBASIC4.43□□□□□ -1.7
CDX1P47902 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CDX1P47902 SNORA64.1-201ENST00000362600 132 ntBASIC4.43□□□□□ -1.7
CDX1P47902 AP002784.2-201ENST00000397300 549 ntBASIC4.43□□□□□ -1.7
CDX1P47902 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC4.43□□□□□ -1.7
CDX1P47902 MIR1303-201ENST00000408625 86 ntBASIC4.43□□□□□ -1.7
CDX1P47902 RMRPP5-201ENST00000411156 267 ntBASIC4.43□□□□□ -1.7
CDX1P47902 HMGB3P31-201ENST00000413333 595 ntBASIC4.43□□□□□ -1.7
CDX1P47902 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.43□□□□□ -1.7
CDX1P47902 GTF3AP1-201ENST00000416942 1004 ntBASIC4.43□□□□□ -1.7
CDX1P47902 AL513325.1-201ENST00000417716 1034 ntBASIC4.43□□□□□ -1.7
CDX1P47902 TNPO1P1-201ENST00000423641 1138 ntBASIC4.43□□□□□ -1.7
CDX1P47902 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC4.43□□□□□ -1.7
CDX1P47902 AP000281.1-201ENST00000444036 316 ntBASIC4.43□□□□□ -1.7
CDX1P47902 AL589765.3-201ENST00000446084 462 ntBASIC4.43□□□□□ -1.7
CDX1P47902 AL035407.2-201ENST00000454090 378 ntBASIC4.43□□□□□ -1.7
CDX1P47902 SNORD125-201ENST00000459538 96 ntBASIC4.43□□□□□ -1.7
CDX1P47902 RN7SL466P-201ENST00000497546 295 ntBASIC4.43□□□□□ -1.7
CDX1P47902 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC4.43□□□□□ -1.7
CDX1P47902 AC010285.3-201ENST00000511668 676 ntBASIC4.43□□□□□ -1.7
CDX1P47902 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.43□□□□□ -1.7
CDX1P47902 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC4.43□□□□□ -1.7
CDX1P47902 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
CDX1P47902 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.43□□□□□ -1.7
CDX1P47902 MAL2-207ENST00000522828 603 ntTSL 3 BASIC4.43□□□□□ -1.7
CDX1P47902 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.43□□□□□ -1.7
CDX1P47902 AC027544.3-201ENST00000535082 757 ntBASIC4.43□□□□□ -1.7
CDX1P47902 AP003717.3-201ENST00000544832 1180 ntBASIC4.43□□□□□ -1.7
CDX1P47902 BNIP3P1-201ENST00000547295 580 ntBASIC4.43□□□□□ -1.7
CDX1P47902 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC4.43□□□□□ -1.7
CDX1P47902 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.43□□□□□ -1.7
CDX1P47902 AC027104.1-201ENST00000563702 681 ntBASIC4.43□□□□□ -1.7
CDX1P47902 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC4.43□□□□□ -1.7
CDX1P47902 SNORD95-201ENST00000579879 68 ntBASIC4.43□□□□□ -1.7
CDX1P47902 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.43□□□□□ -1.7
CDX1P47902 AL589674.2-201ENST00000604304 337 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms