Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.71□□□□□ -1.5
SLC6A4P31645 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.71□□□□□ -1.5
SLC6A4P31645 AC109464.1-201ENST00000511091 819 ntBASIC5.71□□□□□ -1.5
SLC6A4P31645 AC092593.2-201ENST00000513866 913 ntBASIC5.71□□□□□ -1.5
SLC6A4P31645 IGHV3-63-201ENST00000518422 341 ntBASIC5.71□□□□□ -1.5
SLC6A4P31645 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC5.71□□□□□ -1.5
SLC6A4P31645 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.71□□□□□ -1.5
SLC6A4P31645 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC5.71□□□□□ -1.5
SLC6A4P31645 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.71□□□□□ -1.5
SLC6A4P31645 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
SLC6A4P31645 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC5.71□□□□□ -1.5
SLC6A4P31645 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.71□□□□□ -1.5
SLC6A4P31645 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC5.71□□□□□ -1.5
SLC6A4P31645 SNORD39.2-201ENST00000579995 76 ntBASIC5.71□□□□□ -1.5
SLC6A4P31645 AC069366.1-201ENST00000583159 838 ntBASIC5.71□□□□□ -1.5
SLC6A4P31645 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.71□□□□□ -1.5
SLC6A4P31645 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SLC6A4P31645 AC018809.2-201ENST00000602436 3823 ntBASIC5.71□□□□□ -1.5
SLC6A4P31645 Z99497.2-201ENST00000603634 310 ntBASIC5.71□□□□□ -1.5
SLC6A4P31645 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC5.71□□□□□ -1.5
SLC6A4P31645 AC000068.2-201ENST00000608816 460 ntBASIC5.71□□□□□ -1.5
SLC6A4P31645 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.71□□□□□ -1.5
SLC6A4P31645 AC096586.1-201ENST00000610267 561 ntBASIC5.71□□□□□ -1.5
SLC6A4P31645 MIR6798-201ENST00000612887 67 ntBASIC5.71□□□□□ -1.5
SLC6A4P31645 AC009318.3-201ENST00000616916 503 ntBASIC5.71□□□□□ -1.5
SLC6A4P31645 AP004607.9-201ENST00000618202 316 ntBASIC5.71□□□□□ -1.5
SLC6A4P31645 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC5.71□□□□□ -1.5
SLC6A4P31645 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
SLC6A4P31645 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SLC6A4P31645 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SLC6A4P31645 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
SLC6A4P31645 AL158152.1-201ENST00000602652 1435 ntBASIC5.71□□□□□ -1.5
SLC6A4P31645 AC020656.2-201ENST00000613291 5309 ntBASIC5.71□□□□□ -1.5
SLC6A4P31645 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.71□□□□□ -1.5
SLC6A4P31645 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
SLC6A4P31645 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SLC6A4P31645 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
SLC6A4P31645 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SLC6A4P31645 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SLC6A4P31645 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SLC6A4P31645 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SLC6A4P31645 AC010385.1-201ENST00000412374 256 ntBASIC5.7□□□□□ -1.5
SLC6A4P31645 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.7□□□□□ -1.5
SLC6A4P31645 Z75741.2-201ENST00000417272 1167 ntBASIC5.7□□□□□ -1.5
SLC6A4P31645 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.7□□□□□ -1.5
SLC6A4P31645 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.7□□□□□ -1.5
SLC6A4P31645 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.7□□□□□ -1.5
SLC6A4P31645 AL008629.1-201ENST00000438615 184 ntBASIC5.7□□□□□ -1.5
SLC6A4P31645 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.7□□□□□ -1.5
SLC6A4P31645 AL163193.1-201ENST00000444895 788 ntBASIC5.7□□□□□ -1.5
SLC6A4P31645 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC5.7□□□□□ -1.5
SLC6A4P31645 PTENP1-201ENST00000447117 1215 ntBASIC5.7□□□□□ -1.5
SLC6A4P31645 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC5.7□□□□□ -1.5
SLC6A4P31645 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC5.7□□□□□ -1.5
SLC6A4P31645 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.7□□□□□ -1.5
SLC6A4P31645 RN7SL51P-201ENST00000468230 285 ntBASIC5.7□□□□□ -1.5
SLC6A4P31645 PPP1R11P1-201ENST00000486095 376 ntBASIC5.7□□□□□ -1.5
SLC6A4P31645 RPS3AP22-201ENST00000488297 769 ntBASIC5.7□□□□□ -1.5
SLC6A4P31645 RPS17P5-201ENST00000498293 408 ntBASIC5.7□□□□□ -1.5
SLC6A4P31645 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.7□□□□□ -1.5
SLC6A4P31645 AC021193.1-201ENST00000511607 420 ntBASIC5.7□□□□□ -1.5
SLC6A4P31645 GAPDHP62-201ENST00000515313 990 ntBASIC5.7□□□□□ -1.5
SLC6A4P31645 RNU6-1308P-201ENST00000516817 103 ntBASIC5.7□□□□□ -1.5
SLC6A4P31645 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC5.7□□□□□ -1.5
SLC6A4P31645 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.7□□□□□ -1.5
SLC6A4P31645 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.7□□□□□ -1.5
SLC6A4P31645 AP000926.4-201ENST00000527351 454 ntBASIC5.7□□□□□ -1.5
SLC6A4P31645 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SLC6A4P31645 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.7□□□□□ -1.5
SLC6A4P31645 DUXAP6-201ENST00000553858 601 ntBASIC5.7□□□□□ -1.5
SLC6A4P31645 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.7□□□□□ -1.5
SLC6A4P31645 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SLC6A4P31645 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.7□□□□□ -1.5
SLC6A4P31645 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.7□□□□□ -1.5
SLC6A4P31645 MIR6730-201ENST00000622213 67 ntBASIC5.7□□□□□ -1.5
SLC6A4P31645 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.7□□□□□ -1.5
SLC6A4P31645 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.7□□□□□ -1.5
SLC6A4P31645 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.7□□□□□ -1.5
SLC6A4P31645 MIR1322-201ENST00000638013 71 ntBASIC5.7□□□□□ -1.5
SLC6A4P31645 LINC02211-204ENST00000642024 1070 ntBASIC5.7□□□□□ -1.5
SLC6A4P31645 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SLC6A4P31645 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
SLC6A4P31645 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SLC6A4P31645 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
SLC6A4P31645 AC144833.1-201ENST00000567953 4089 ntBASIC5.7□□□□□ -1.5
SLC6A4P31645 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.7□□□□□ -1.5
SLC6A4P31645 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SLC6A4P31645 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SLC6A4P31645 AC073055.1-201ENST00000456901 1621 ntBASIC5.7□□□□□ -1.5
SLC6A4P31645 AC015799.1-201ENST00000622996 3122 ntBASIC5.7□□□□□ -1.5
SLC6A4P31645 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SLC6A4P31645 AC011503.2-201ENST00000594230 1500 ntBASIC5.69□□□□□ -1.5
SLC6A4P31645 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SLC6A4P31645 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
SLC6A4P31645 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SLC6A4P31645 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SLC6A4P31645 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.69□□□□□ -1.5
SLC6A4P31645 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SLC6A4P31645 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.69□□□□□ -1.5
SLC6A4P31645 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms