Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 Z98745.1-201ENST00000402553 494 ntBASIC7.31□□□□□ -1.24
CLIP1P30622 GAPDHP49-201ENST00000421421 961 ntBASIC7.31□□□□□ -1.24
CLIP1P30622 Z74021.1-201ENST00000423610 407 ntBASIC7.31□□□□□ -1.24
CLIP1P30622 RPL21P43-201ENST00000425440 472 ntBASIC7.31□□□□□ -1.24
CLIP1P30622 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC7.31□□□□□ -1.24
CLIP1P30622 FTH1P16-201ENST00000435241 552 ntBASIC7.31□□□□□ -1.24
CLIP1P30622 RPL23AP93-201ENST00000440847 484 ntBASIC7.31□□□□□ -1.24
CLIP1P30622 MTCYBP21-201ENST00000443300 1113 ntBASIC7.31□□□□□ -1.24
CLIP1P30622 SNRPCP3-201ENST00000474888 476 ntBASIC7.31□□□□□ -1.24
CLIP1P30622 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC7.31□□□□□ -1.24
CLIP1P30622 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC7.31□□□□□ -1.24
CLIP1P30622 AC130352.1-201ENST00000602979 661 ntBASIC7.31□□□□□ -1.24
CLIP1P30622 AL133243.1-201ENST00000614487 366 ntBASIC7.31□□□□□ -1.24
CLIP1P30622 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CLIP1P30622 SAMMSON-210ENST00000641260 1308 ntBASIC7.31□□□□□ -1.24
CLIP1P30622 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC7.31□□□□□ -1.24
CLIP1P30622 AL359922.3-201ENST00000624779 1670 ntBASIC7.31□□□□□ -1.24
CLIP1P30622 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC7.31□□□□□ -1.24
CLIP1P30622 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC7.31□□□□□ -1.24
CLIP1P30622 ICE2P1-201ENST00000512800 1849 ntBASIC7.31□□□□□ -1.24
CLIP1P30622 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CLIP1P30622 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CLIP1P30622 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
CLIP1P30622 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CLIP1P30622 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CLIP1P30622 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC7.3□□□□□ -1.24
CLIP1P30622 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC7.3□□□□□ -1.24
CLIP1P30622 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC7.3□□□□□ -1.24
CLIP1P30622 CBX1P1-201ENST00000440184 427 ntBASIC7.3□□□□□ -1.24
CLIP1P30622 GTF3AP5-201ENST00000442645 697 ntBASIC7.3□□□□□ -1.24
CLIP1P30622 CPHL1P-201ENST00000461341 3407 ntBASIC7.3□□□□□ -1.24
CLIP1P30622 RPL7AP28-201ENST00000464513 571 ntBASIC7.3□□□□□ -1.24
CLIP1P30622 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
CLIP1P30622 AC090602.1-201ENST00000469695 252 ntBASIC7.3□□□□□ -1.24
CLIP1P30622 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC7.3□□□□□ -1.24
CLIP1P30622 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC7.3□□□□□ -1.24
CLIP1P30622 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
CLIP1P30622 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC7.3□□□□□ -1.24
CLIP1P30622 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC7.3□□□□□ -1.24
CLIP1P30622 AC090181.2-201ENST00000602975 672 ntBASIC7.3□□□□□ -1.24
CLIP1P30622 AC010857.1-201ENST00000606398 594 ntBASIC7.3□□□□□ -1.24
CLIP1P30622 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC7.3□□□□□ -1.24
CLIP1P30622 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CLIP1P30622 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CLIP1P30622 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
CLIP1P30622 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CLIP1P30622 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CLIP1P30622 RPL23AP59-201ENST00000399415 461 ntBASIC7.29□□□□□ -1.24
CLIP1P30622 MIR1193-201ENST00000408109 78 ntBASIC7.29□□□□□ -1.24
CLIP1P30622 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC7.29□□□□□ -1.24
CLIP1P30622 AC012519.1-201ENST00000424588 610 ntBASIC7.29□□□□□ -1.24
CLIP1P30622 AP001324.1-201ENST00000428553 399 ntBASIC7.29□□□□□ -1.24
CLIP1P30622 RPL23AP24-201ENST00000458203 385 ntBASIC7.29□□□□□ -1.24
CLIP1P30622 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC7.29□□□□□ -1.24
CLIP1P30622 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CLIP1P30622 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CLIP1P30622 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC7.29□□□□□ -1.24
CLIP1P30622 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CLIP1P30622 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
CLIP1P30622 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CLIP1P30622 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
CLIP1P30622 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC7.28□□□□□ -1.24
CLIP1P30622 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
CLIP1P30622 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
CLIP1P30622 SDHCP2-201ENST00000398565 501 ntBASIC7.28□□□□□ -1.24
CLIP1P30622 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC7.28□□□□□ -1.24
CLIP1P30622 GAS5-208ENST00000425771 242 ntTSL 3 BASIC7.28□□□□□ -1.24
CLIP1P30622 NMNAT1P2-201ENST00000435192 860 ntBASIC7.28□□□□□ -1.24
CLIP1P30622 MRPS21P3-201ENST00000436696 262 ntBASIC7.28□□□□□ -1.24
CLIP1P30622 RPL21P126-201ENST00000470049 478 ntBASIC7.28□□□□□ -1.24
CLIP1P30622 RN7SL41P-201ENST00000476144 297 ntBASIC7.28□□□□□ -1.24
CLIP1P30622 HMGB3P16-201ENST00000508037 287 ntBASIC7.28□□□□□ -1.24
CLIP1P30622 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC7.28□□□□□ -1.24
CLIP1P30622 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC7.28□□□□□ -1.24
CLIP1P30622 AL109766.1-201ENST00000555080 552 ntBASIC7.28□□□□□ -1.24
CLIP1P30622 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC7.28□□□□□ -1.24
CLIP1P30622 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC7.28□□□□□ -1.24
CLIP1P30622 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CLIP1P30622 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC7.28□□□□□ -1.24
CLIP1P30622 EYA4-206ENST00000431403 2154 ntTSL 5 BASIC7.28□□□□□ -1.24
CLIP1P30622 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CLIP1P30622 LINC00622-201ENST00000562811 1570 ntBASIC7.28□□□□□ -1.24
CLIP1P30622 AC108467.2-201ENST00000617640 1597 ntBASIC7.28□□□□□ -1.24
CLIP1P30622 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CLIP1P30622 AL731532.2-201ENST00000623542 1953 ntBASIC7.28□□□□□ -1.24
CLIP1P30622 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC7.28□□□□□ -1.24
CLIP1P30622 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
CLIP1P30622 RNU1-130P-201ENST00000363930 160 ntBASIC7.27□□□□□ -1.24
CLIP1P30622 RPL17P36-201ENST00000420302 549 ntBASIC7.27□□□□□ -1.24
CLIP1P30622 HMGN2P27-201ENST00000427352 270 ntBASIC7.27□□□□□ -1.24
CLIP1P30622 SCP2-206ENST00000430330 938 ntTSL 2 BASIC7.27□□□□□ -1.24
CLIP1P30622 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC7.27□□□□□ -1.24
CLIP1P30622 FHP1-201ENST00000442741 703 ntBASIC7.27□□□□□ -1.24
CLIP1P30622 MRPL48P1-201ENST00000445390 636 ntBASIC7.27□□□□□ -1.24
CLIP1P30622 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC7.27□□□□□ -1.24
CLIP1P30622 RNA5SP464-201ENST00000516251 108 ntBASIC7.27□□□□□ -1.24
CLIP1P30622 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC7.27□□□□□ -1.24
CLIP1P30622 AP001160.4-201ENST00000596971 382 ntBASIC7.27□□□□□ -1.24
CLIP1P30622 AC023762.1-201ENST00000603280 584 ntBASIC7.27□□□□□ -1.24
CLIP1P30622 AC020634.1-201ENST00000608701 549 ntBASIC7.27□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 184.9 ms