Protein–RNA interactions for Protein: P29466

CASP1, Caspase-1, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP1P29466 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
CASP1P29466 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
CASP1P29466 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.09□□□□□ -1.6
CASP1P29466 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CASP1P29466 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CASP1P29466 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CASP1P29466 EOGT-210ENST00000615922 1931 ntBASIC5.08□□□□□ -1.6
CASP1P29466 RNU1-20P-201ENST00000363314 162 ntBASIC5.08□□□□□ -1.6
CASP1P29466 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.08□□□□□ -1.6
CASP1P29466 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.08□□□□□ -1.6
CASP1P29466 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.08□□□□□ -1.6
CASP1P29466 NPM1P22-201ENST00000427761 952 ntBASIC5.08□□□□□ -1.6
CASP1P29466 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.08□□□□□ -1.6
CASP1P29466 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.08□□□□□ -1.6
CASP1P29466 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.08□□□□□ -1.6
CASP1P29466 RPL23AP93-201ENST00000440847 484 ntBASIC5.08□□□□□ -1.6
CASP1P29466 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CASP1P29466 AC092324.1-201ENST00000468671 324 ntBASIC5.08□□□□□ -1.6
CASP1P29466 AC083982.1-201ENST00000485679 344 ntBASIC5.08□□□□□ -1.6
CASP1P29466 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.08□□□□□ -1.6
CASP1P29466 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.08□□□□□ -1.6
CASP1P29466 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.08□□□□□ -1.6
CASP1P29466 EDDM3DP-201ENST00000554692 434 ntBASIC5.08□□□□□ -1.6
CASP1P29466 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.08□□□□□ -1.6
CASP1P29466 AC027455.1-201ENST00000574104 594 ntBASIC5.08□□□□□ -1.6
CASP1P29466 ADAD1P2-201ENST00000588476 646 ntBASIC5.08□□□□□ -1.6
CASP1P29466 AP002360.3-201ENST00000607673 710 ntBASIC5.08□□□□□ -1.6
CASP1P29466 AC140113.4-201ENST00000622087 222 ntBASIC5.08□□□□□ -1.6
CASP1P29466 AL513548.1-201ENST00000562904 1724 ntBASIC5.08□□□□□ -1.6
CASP1P29466 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
CASP1P29466 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CASP1P29466 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CASP1P29466 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
CASP1P29466 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.08□□□□□ -1.6
CASP1P29466 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.08□□□□□ -1.6
CASP1P29466 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CASP1P29466 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.07□□□□□ -1.6
CASP1P29466 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CASP1P29466 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CASP1P29466 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC5.07□□□□□ -1.6
CASP1P29466 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.07□□□□□ -1.6
CASP1P29466 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.07□□□□□ -1.6
CASP1P29466 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC5.07□□□□□ -1.6
CASP1P29466 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CASP1P29466 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CASP1P29466 RNU1-63P-201ENST00000383902 164 ntBASIC5.07□□□□□ -1.6
CASP1P29466 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CASP1P29466 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CASP1P29466 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.07□□□□□ -1.6
CASP1P29466 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.07□□□□□ -1.6
CASP1P29466 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC5.07□□□□□ -1.6
CASP1P29466 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.07□□□□□ -1.6
CASP1P29466 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.07□□□□□ -1.6
CASP1P29466 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.07□□□□□ -1.6
CASP1P29466 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CASP1P29466 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CASP1P29466 ATP5J2P6-201ENST00000565203 266 ntBASIC5.07□□□□□ -1.6
CASP1P29466 AC091178.1-203ENST00000584586 279 ntBASIC5.07□□□□□ -1.6
CASP1P29466 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.07□□□□□ -1.6
CASP1P29466 AC026979.4-201ENST00000606555 645 ntBASIC5.07□□□□□ -1.6
CASP1P29466 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.07□□□□□ -1.6
CASP1P29466 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.07□□□□□ -1.6
CASP1P29466 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.07□□□□□ -1.6
CASP1P29466 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CASP1P29466 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.07□□□□□ -1.6
CASP1P29466 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CASP1P29466 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
CASP1P29466 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CASP1P29466 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
CASP1P29466 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CASP1P29466 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
CASP1P29466 RNA5SP87-201ENST00000384155 118 ntBASIC5.06□□□□□ -1.6
CASP1P29466 MIR550A3-201ENST00000390735 95 ntBASIC5.06□□□□□ -1.6
CASP1P29466 AL049697.2-201ENST00000403708 294 ntBASIC5.06□□□□□ -1.6
CASP1P29466 AC017078.1-201ENST00000416146 368 ntBASIC5.06□□□□□ -1.6
CASP1P29466 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC5.06□□□□□ -1.6
CASP1P29466 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.06□□□□□ -1.6
CASP1P29466 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.06□□□□□ -1.6
CASP1P29466 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC5.06□□□□□ -1.6
CASP1P29466 RN7SL817P-201ENST00000480777 288 ntBASIC5.06□□□□□ -1.6
CASP1P29466 AC011005.3-201ENST00000491624 395 ntBASIC5.06□□□□□ -1.6
CASP1P29466 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.06□□□□□ -1.6
CASP1P29466 CYCSP28-201ENST00000534284 321 ntBASIC5.06□□□□□ -1.6
CASP1P29466 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.06□□□□□ -1.6
CASP1P29466 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.06□□□□□ -1.6
CASP1P29466 AL160290.3-201ENST00000604869 165 ntBASIC5.06□□□□□ -1.6
CASP1P29466 AC020634.1-201ENST00000608701 549 ntBASIC5.06□□□□□ -1.6
CASP1P29466 AL353726.1-201ENST00000614041 1000 ntBASIC5.06□□□□□ -1.6
CASP1P29466 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.06□□□□□ -1.6
CASP1P29466 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.06□□□□□ -1.6
CASP1P29466 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
CASP1P29466 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.06□□□□□ -1.6
CASP1P29466 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
CASP1P29466 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CASP1P29466 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.06□□□□□ -1.6
CASP1P29466 NXPH1-205ENST00000602349 1953 ntBASIC5.05□□□□□ -1.6
CASP1P29466 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CASP1P29466 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
CASP1P29466 OR14L1P-202ENST00000641545 3009 ntBASIC5.05□□□□□ -1.6
CASP1P29466 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms