Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AL451142.2-201ENST00000429076 2090 ntBASIC4.77□□□□□ -1.65
PTPN6P29350 AC068446.1-201ENST00000556425 1549 ntBASIC4.77□□□□□ -1.65
PTPN6P29350 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.77□□□□□ -1.65
PTPN6P29350 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.77□□□□□ -1.65
PTPN6P29350 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PTPN6P29350 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
PTPN6P29350 SNORA58B-201ENST00000364259 136 ntBASIC4.77□□□□□ -1.65
PTPN6P29350 U3.36-201ENST00000408418 213 ntBASIC4.77□□□□□ -1.65
PTPN6P29350 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.77□□□□□ -1.65
PTPN6P29350 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
PTPN6P29350 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.77□□□□□ -1.65
PTPN6P29350 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PTPN6P29350 HSPE1P16-201ENST00000426640 348 ntBASIC4.77□□□□□ -1.65
PTPN6P29350 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.77□□□□□ -1.65
PTPN6P29350 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PTPN6P29350 RPS29P9-201ENST00000440360 171 ntBASIC4.77□□□□□ -1.65
PTPN6P29350 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.77□□□□□ -1.65
PTPN6P29350 AL691482.1-201ENST00000453255 87 ntBASIC4.77□□□□□ -1.65
PTPN6P29350 TPT1P1-201ENST00000458495 518 ntBASIC4.77□□□□□ -1.65
PTPN6P29350 AC091180.1-201ENST00000462104 372 ntBASIC4.77□□□□□ -1.65
PTPN6P29350 AC009127.1-201ENST00000467090 155 ntBASIC4.77□□□□□ -1.65
PTPN6P29350 RPL32P9-201ENST00000487963 407 ntBASIC4.77□□□□□ -1.65
PTPN6P29350 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.77□□□□□ -1.65
PTPN6P29350 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.77□□□□□ -1.65
PTPN6P29350 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PTPN6P29350 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC4.77□□□□□ -1.65
PTPN6P29350 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
PTPN6P29350 AL049830.4-201ENST00000555149 351 ntBASIC4.77□□□□□ -1.65
PTPN6P29350 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.77□□□□□ -1.65
PTPN6P29350 RN7SL435P-201ENST00000584418 282 ntBASIC4.77□□□□□ -1.65
PTPN6P29350 AC245128.3-201ENST00000594721 748 ntBASIC4.77□□□□□ -1.65
PTPN6P29350 AC016911.1-201ENST00000613297 452 ntBASIC4.77□□□□□ -1.65
PTPN6P29350 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
PTPN6P29350 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PTPN6P29350 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.77□□□□□ -1.65
PTPN6P29350 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
PTPN6P29350 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
PTPN6P29350 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PTPN6P29350 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.77□□□□□ -1.65
PTPN6P29350 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
PTPN6P29350 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
PTPN6P29350 AC090971.4-201ENST00000560291 1800 ntBASIC4.76□□□□□ -1.65
PTPN6P29350 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.76□□□□□ -1.65
PTPN6P29350 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PTPN6P29350 TCP1P3-201ENST00000414406 1498 ntBASIC4.76□□□□□ -1.65
PTPN6P29350 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
PTPN6P29350 AC104260.2-201ENST00000623551 3497 ntBASIC4.76□□□□□ -1.65
PTPN6P29350 AC090017.1-201ENST00000548612 1779 ntBASIC4.76□□□□□ -1.65
PTPN6P29350 AL731566.1-201ENST00000620490 1937 ntBASIC4.76□□□□□ -1.65
PTPN6P29350 AC009229.4-201ENST00000623854 1947 ntBASIC4.76□□□□□ -1.65
PTPN6P29350 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.76□□□□□ -1.65
PTPN6P29350 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.76□□□□□ -1.65
PTPN6P29350 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
PTPN6P29350 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PTPN6P29350 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PTPN6P29350 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.76□□□□□ -1.65
PTPN6P29350 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
PTPN6P29350 ATP5HP3-201ENST00000396994 486 ntBASIC4.76□□□□□ -1.65
PTPN6P29350 LRRC37BP1-201ENST00000398851 714 ntBASIC4.76□□□□□ -1.65
PTPN6P29350 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.76□□□□□ -1.65
PTPN6P29350 SNORA77-201ENST00000408716 125 ntBASIC4.76□□□□□ -1.65
PTPN6P29350 RN7SKP247-201ENST00000411094 308 ntBASIC4.76□□□□□ -1.65
PTPN6P29350 RN7SKP126-201ENST00000411143 300 ntBASIC4.76□□□□□ -1.65
PTPN6P29350 AC007394.1-201ENST00000421941 531 ntBASIC4.76□□□□□ -1.65
PTPN6P29350 AC099336.2-201ENST00000422457 254 ntBASIC4.76□□□□□ -1.65
PTPN6P29350 NDUFA5P1-201ENST00000433858 341 ntBASIC4.76□□□□□ -1.65
PTPN6P29350 MTCYBP29-201ENST00000436327 1006 ntBASIC4.76□□□□□ -1.65
PTPN6P29350 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.76□□□□□ -1.65
PTPN6P29350 CACYBPP1-201ENST00000438592 684 ntBASIC4.76□□□□□ -1.65
PTPN6P29350 AL606490.8-201ENST00000441624 319 ntBASIC4.76□□□□□ -1.65
PTPN6P29350 AC004980.3-201ENST00000447046 365 ntBASIC4.76□□□□□ -1.65
PTPN6P29350 HMGB1P4-201ENST00000455362 567 ntBASIC4.76□□□□□ -1.65
PTPN6P29350 AC099560.2-201ENST00000457554 255 ntBASIC4.76□□□□□ -1.65
PTPN6P29350 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.76□□□□□ -1.65
PTPN6P29350 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.76□□□□□ -1.65
PTPN6P29350 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.76□□□□□ -1.65
PTPN6P29350 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
PTPN6P29350 RNA5SP303-201ENST00000516192 130 ntBASIC4.76□□□□□ -1.65
PTPN6P29350 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.76□□□□□ -1.65
PTPN6P29350 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.76□□□□□ -1.65
PTPN6P29350 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.76□□□□□ -1.65
PTPN6P29350 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.76□□□□□ -1.65
PTPN6P29350 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
PTPN6P29350 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.76□□□□□ -1.65
PTPN6P29350 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.76□□□□□ -1.65
PTPN6P29350 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.76□□□□□ -1.65
PTPN6P29350 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.76□□□□□ -1.65
PTPN6P29350 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.76□□□□□ -1.65
PTPN6P29350 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.76□□□□□ -1.65
PTPN6P29350 AC090953.1-201ENST00000604305 1092 ntBASIC4.76□□□□□ -1.65
PTPN6P29350 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.76□□□□□ -1.65
PTPN6P29350 BNIP3P41-202ENST00000616656 861 ntBASIC4.76□□□□□ -1.65
PTPN6P29350 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC4.76□□□□□ -1.65
PTPN6P29350 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.76□□□□□ -1.65
PTPN6P29350 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.76□□□□□ -1.65
PTPN6P29350 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.76□□□□□ -1.65
PTPN6P29350 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
PTPN6P29350 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.76□□□□□ -1.65
PTPN6P29350 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.76□□□□□ -1.65
PTPN6P29350 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms