Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AC009263.1-201ENST00000441193 1239 ntBASIC5.09□□□□□ -1.59
ABCD3P28288 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.09□□□□□ -1.59
ABCD3P28288 LINC02210-201ENST00000444561 288 ntBASIC5.09□□□□□ -1.59
ABCD3P28288 AL050341.1-201ENST00000447743 313 ntBASIC5.09□□□□□ -1.59
ABCD3P28288 RPS23P9-201ENST00000448848 438 ntBASIC5.09□□□□□ -1.59
ABCD3P28288 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.09□□□□□ -1.59
ABCD3P28288 AZGP1P2-201ENST00000454506 345 ntBASIC5.09□□□□□ -1.59
ABCD3P28288 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC5.09□□□□□ -1.59
ABCD3P28288 RPL37P3-201ENST00000456825 293 ntBASIC5.09□□□□□ -1.59
ABCD3P28288 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.09□□□□□ -1.59
ABCD3P28288 RN7SL188P-201ENST00000469842 285 ntBASIC5.09□□□□□ -1.59
ABCD3P28288 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.09□□□□□ -1.59
ABCD3P28288 SUMO2P5-201ENST00000506790 245 ntBASIC5.09□□□□□ -1.59
ABCD3P28288 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.09□□□□□ -1.59
ABCD3P28288 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.09□□□□□ -1.59
ABCD3P28288 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC5.09□□□□□ -1.59
ABCD3P28288 RNA5SP362-201ENST00000516048 118 ntBASIC5.09□□□□□ -1.59
ABCD3P28288 RN7SKP99-201ENST00000517028 307 ntBASIC5.09□□□□□ -1.59
ABCD3P28288 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.09□□□□□ -1.59
ABCD3P28288 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC5.09□□□□□ -1.59
ABCD3P28288 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.09□□□□□ -1.59
ABCD3P28288 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.09□□□□□ -1.59
ABCD3P28288 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.09□□□□□ -1.59
ABCD3P28288 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC5.09□□□□□ -1.59
ABCD3P28288 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.09□□□□□ -1.59
ABCD3P28288 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.09□□□□□ -1.59
ABCD3P28288 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.09□□□□□ -1.59
ABCD3P28288 AC093673.2-201ENST00000609674 331 ntBASIC5.09□□□□□ -1.59
ABCD3P28288 AL049767.1-202ENST00000637826 242 ntBASIC5.09□□□□□ -1.59
ABCD3P28288 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
ABCD3P28288 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.09□□□□□ -1.59
ABCD3P28288 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
ABCD3P28288 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.09□□□□□ -1.59
ABCD3P28288 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
ABCD3P28288 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.09□□□□□ -1.6
ABCD3P28288 SMG1P6-201ENST00000532337 2930 ntBASIC5.09□□□□□ -1.6
ABCD3P28288 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.08□□□□□ -1.6
ABCD3P28288 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
ABCD3P28288 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
ABCD3P28288 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
ABCD3P28288 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
ABCD3P28288 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
ABCD3P28288 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
ABCD3P28288 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5.08□□□□□ -1.6
ABCD3P28288 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
ABCD3P28288 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
ABCD3P28288 CASC19-248ENST00000641674 1356 ntBASIC5.08□□□□□ -1.6
ABCD3P28288 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
ABCD3P28288 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.08□□□□□ -1.6
ABCD3P28288 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
ABCD3P28288 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
ABCD3P28288 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
ABCD3P28288 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
ABCD3P28288 RNA5SP234-201ENST00000363916 119 ntBASIC5.08□□□□□ -1.6
ABCD3P28288 RN7SKP269-201ENST00000365545 319 ntBASIC5.08□□□□□ -1.6
ABCD3P28288 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
ABCD3P28288 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC5.08□□□□□ -1.6
ABCD3P28288 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.08□□□□□ -1.6
ABCD3P28288 LIPT1P1-201ENST00000415870 1186 ntBASIC5.08□□□□□ -1.6
ABCD3P28288 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.08□□□□□ -1.6
ABCD3P28288 TCEA1P2-201ENST00000420496 906 ntBASIC5.08□□□□□ -1.6
ABCD3P28288 AP001324.1-201ENST00000428553 399 ntBASIC5.08□□□□□ -1.6
ABCD3P28288 DYNLL1P7-201ENST00000429273 258 ntBASIC5.08□□□□□ -1.6
ABCD3P28288 AL353597.2-202ENST00000434901 373 ntBASIC5.08□□□□□ -1.6
ABCD3P28288 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
ABCD3P28288 RPS7P5-201ENST00000441482 581 ntBASIC5.08□□□□□ -1.6
ABCD3P28288 AL592437.1-201ENST00000443781 492 ntBASIC5.08□□□□□ -1.6
ABCD3P28288 YWHAQP9-201ENST00000445891 512 ntBASIC5.08□□□□□ -1.6
ABCD3P28288 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC5.08□□□□□ -1.6
ABCD3P28288 TRY2P-201ENST00000448860 689 ntBASIC5.08□□□□□ -1.6
ABCD3P28288 PPIAP20-201ENST00000449839 135 ntBASIC5.08□□□□□ -1.6
ABCD3P28288 GAPDHP14-201ENST00000450472 937 ntBASIC5.08□□□□□ -1.6
ABCD3P28288 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
ABCD3P28288 RANP1-206ENST00000455094 651 ntBASIC5.08□□□□□ -1.6
ABCD3P28288 RN7SL51P-201ENST00000468230 285 ntBASIC5.08□□□□□ -1.6
ABCD3P28288 RPL35AP19-201ENST00000469425 329 ntBASIC5.08□□□□□ -1.6
ABCD3P28288 AC100832.1-201ENST00000471945 383 ntBASIC5.08□□□□□ -1.6
ABCD3P28288 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC5.08□□□□□ -1.6
ABCD3P28288 AC090638.1-201ENST00000498296 909 ntBASIC5.08□□□□□ -1.6
ABCD3P28288 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.08□□□□□ -1.6
ABCD3P28288 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.08□□□□□ -1.6
ABCD3P28288 PRELID3BP4-201ENST00000515476 571 ntBASIC5.08□□□□□ -1.6
ABCD3P28288 TBCA-203ENST00000517679 545 ntTSL 3 BASIC5.08□□□□□ -1.6
ABCD3P28288 AC008562.1-201ENST00000521763 330 ntBASIC5.08□□□□□ -1.6
ABCD3P28288 AC138832.1-201ENST00000522871 556 ntBASIC5.08□□□□□ -1.6
ABCD3P28288 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.08□□□□□ -1.6
ABCD3P28288 AC118942.1-201ENST00000529674 1035 ntBASIC5.08□□□□□ -1.6
ABCD3P28288 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.08□□□□□ -1.6
ABCD3P28288 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC5.08□□□□□ -1.6
ABCD3P28288 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.08□□□□□ -1.6
ABCD3P28288 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.08□□□□□ -1.6
ABCD3P28288 BNIP3P40-201ENST00000596017 556 ntBASIC5.08□□□□□ -1.6
ABCD3P28288 AC010245.2-201ENST00000606908 1167 ntBASIC5.08□□□□□ -1.6
ABCD3P28288 AC016597.2-201ENST00000613256 341 ntBASIC5.08□□□□□ -1.6
ABCD3P28288 AC073342.3-201ENST00000624211 193 ntBASIC5.08□□□□□ -1.6
ABCD3P28288 CR392039.4-201ENST00000624968 501 ntBASIC5.08□□□□□ -1.6
ABCD3P28288 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.08□□□□□ -1.6
ABCD3P28288 ATE1-AS1-202ENST00000636460 506 ntBASIC5.08□□□□□ -1.6
ABCD3P28288 AC017104.5-201ENST00000637647 639 ntBASIC5.08□□□□□ -1.6
ABCD3P28288 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms