Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4□□□□□ -1.77
COL8A2P25067 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4□□□□□ -1.77
COL8A2P25067 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4□□□□□ -1.77
COL8A2P25067 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4□□□□□ -1.77
COL8A2P25067 RNA5SP332-201ENST00000391063 115 ntBASIC4□□□□□ -1.77
COL8A2P25067 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC4□□□□□ -1.77
COL8A2P25067 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4□□□□□ -1.77
COL8A2P25067 AC010740.1-201ENST00000417035 684 ntBASIC4□□□□□ -1.77
COL8A2P25067 AC104333.2-201ENST00000422630 192 ntBASIC4□□□□□ -1.77
COL8A2P25067 OR2AH1P-201ENST00000425717 928 ntBASIC4□□□□□ -1.77
COL8A2P25067 HMGB1P32-201ENST00000425971 565 ntBASIC4□□□□□ -1.77
COL8A2P25067 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4□□□□□ -1.77
COL8A2P25067 DNAJC19P7-201ENST00000428811 344 ntBASIC4□□□□□ -1.77
COL8A2P25067 CYCSP11-201ENST00000436426 315 ntBASIC4□□□□□ -1.77
COL8A2P25067 KRTAP5-14P-201ENST00000502328 121 ntBASIC4□□□□□ -1.77
COL8A2P25067 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4□□□□□ -1.77
COL8A2P25067 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4□□□□□ -1.77
COL8A2P25067 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4□□□□□ -1.77
COL8A2P25067 AC073091.2-201ENST00000603205 907 ntBASIC4□□□□□ -1.77
COL8A2P25067 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4□□□□□ -1.77
COL8A2P25067 MIR7641-1-201ENST00000627518 61 ntBASIC4□□□□□ -1.77
COL8A2P25067 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
COL8A2P25067 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4□□□□□ -1.77
COL8A2P25067 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
COL8A2P25067 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
COL8A2P25067 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
COL8A2P25067 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
COL8A2P25067 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
COL8A2P25067 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
COL8A2P25067 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
COL8A2P25067 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC3.99□□□□□ -1.77
COL8A2P25067 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
COL8A2P25067 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
COL8A2P25067 SMG1P4-204ENST00000523028 4131 ntBASIC3.99□□□□□ -1.77
COL8A2P25067 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
COL8A2P25067 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
COL8A2P25067 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC3.99□□□□□ -1.77
COL8A2P25067 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC3.99□□□□□ -1.77
COL8A2P25067 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC3.99□□□□□ -1.77
COL8A2P25067 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
COL8A2P25067 OR4K15-201ENST00000305051 1216 ntBASIC3.99□□□□□ -1.77
COL8A2P25067 AC017079.1-201ENST00000333650 415 ntBASIC3.99□□□□□ -1.77
COL8A2P25067 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
COL8A2P25067 AL591848.1-201ENST00000413092 322 ntBASIC3.99□□□□□ -1.77
COL8A2P25067 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
COL8A2P25067 ATG4AP1-201ENST00000416893 538 ntBASIC3.99□□□□□ -1.77
COL8A2P25067 AC006065.1-201ENST00000422539 802 ntBASIC3.99□□□□□ -1.77
COL8A2P25067 CENPIP1-201ENST00000425713 902 ntBASIC3.99□□□□□ -1.77
COL8A2P25067 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC3.99□□□□□ -1.77
COL8A2P25067 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC3.99□□□□□ -1.77
COL8A2P25067 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC3.99□□□□□ -1.77
COL8A2P25067 AC097523.2-201ENST00000435551 652 ntBASIC3.99□□□□□ -1.77
COL8A2P25067 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
COL8A2P25067 RPL35AP21-201ENST00000437667 333 ntBASIC3.99□□□□□ -1.77
COL8A2P25067 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC3.99□□□□□ -1.77
COL8A2P25067 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC3.99□□□□□ -1.77
COL8A2P25067 TPT1P1-201ENST00000458495 518 ntBASIC3.99□□□□□ -1.77
COL8A2P25067 snoU13.1-201ENST00000459157 104 ntBASIC3.99□□□□□ -1.77
COL8A2P25067 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC3.99□□□□□ -1.77
COL8A2P25067 RN7SL481P-201ENST00000477764 299 ntBASIC3.99□□□□□ -1.77
COL8A2P25067 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC3.99□□□□□ -1.77
COL8A2P25067 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC3.99□□□□□ -1.77
COL8A2P25067 OR51K1P-201ENST00000510214 950 ntBASIC3.99□□□□□ -1.77
COL8A2P25067 AC021733.2-201ENST00000518830 497 ntBASIC3.99□□□□□ -1.77
COL8A2P25067 RAB9BP1-201ENST00000519581 626 ntBASIC3.99□□□□□ -1.77
COL8A2P25067 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
COL8A2P25067 AL110118.1-201ENST00000553543 400 ntBASIC3.99□□□□□ -1.77
COL8A2P25067 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
COL8A2P25067 RN7SL690P-201ENST00000582087 240 ntBASIC3.99□□□□□ -1.77
COL8A2P25067 AC068790.4-201ENST00000602474 263 ntBASIC3.99□□□□□ -1.77
COL8A2P25067 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC3.99□□□□□ -1.77
COL8A2P25067 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC3.99□□□□□ -1.77
COL8A2P25067 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
COL8A2P25067 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
COL8A2P25067 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
COL8A2P25067 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC3.99□□□□□ -1.77
COL8A2P25067 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC3.99□□□□□ -1.77
COL8A2P25067 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
COL8A2P25067 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC3.99□□□□□ -1.77
COL8A2P25067 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
COL8A2P25067 AL731566.1-201ENST00000620490 1937 ntBASIC3.99□□□□□ -1.77
COL8A2P25067 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
COL8A2P25067 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC3.99□□□□□ -1.77
COL8A2P25067 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
COL8A2P25067 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
COL8A2P25067 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
COL8A2P25067 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
COL8A2P25067 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
COL8A2P25067 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
COL8A2P25067 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
COL8A2P25067 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
COL8A2P25067 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC3.98□□□□□ -1.77
COL8A2P25067 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
COL8A2P25067 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
COL8A2P25067 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
COL8A2P25067 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
COL8A2P25067 DHX40P1-201ENST00000588725 1412 ntBASIC3.98□□□□□ -1.77
COL8A2P25067 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC3.98□□□□□ -1.77
COL8A2P25067 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
COL8A2P25067 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms