Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 GCSHP4-201ENST00000538792 439 ntBASIC4.86□□□□□ -1.63
XRCC1P18887 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.86□□□□□ -1.63
XRCC1P18887 AL358913.1-201ENST00000554342 121 ntBASIC4.86□□□□□ -1.63
XRCC1P18887 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
XRCC1P18887 TVP23CP2-201ENST00000571473 623 ntBASIC4.86□□□□□ -1.63
XRCC1P18887 CYCSP40-201ENST00000575927 294 ntBASIC4.86□□□□□ -1.63
XRCC1P18887 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC4.86□□□□□ -1.63
XRCC1P18887 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.86□□□□□ -1.63
XRCC1P18887 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.86□□□□□ -1.63
XRCC1P18887 AC087385.3-201ENST00000620477 187 ntBASIC4.86□□□□□ -1.63
XRCC1P18887 AC027228.2-201ENST00000567141 2154 ntBASIC4.86□□□□□ -1.63
XRCC1P18887 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.86□□□□□ -1.63
XRCC1P18887 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
XRCC1P18887 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.86□□□□□ -1.63
XRCC1P18887 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
XRCC1P18887 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
XRCC1P18887 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
XRCC1P18887 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
XRCC1P18887 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
XRCC1P18887 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
XRCC1P18887 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
XRCC1P18887 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
XRCC1P18887 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
XRCC1P18887 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
XRCC1P18887 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.85□□□□□ -1.63
XRCC1P18887 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.85□□□□□ -1.63
XRCC1P18887 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
XRCC1P18887 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.85□□□□□ -1.63
XRCC1P18887 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
XRCC1P18887 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.85□□□□□ -1.63
XRCC1P18887 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
XRCC1P18887 HMGB3P7-201ENST00000400214 611 ntBASIC4.85□□□□□ -1.63
XRCC1P18887 ZNF736P10Y-201ENST00000403990 1110 ntBASIC4.85□□□□□ -1.63
XRCC1P18887 SNORA79B-201ENST00000410557 148 ntBASIC4.85□□□□□ -1.63
XRCC1P18887 AC234781.4-201ENST00000419384 244 ntBASIC4.85□□□□□ -1.63
XRCC1P18887 PTP4A1P1-201ENST00000420539 515 ntBASIC4.85□□□□□ -1.63
XRCC1P18887 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC4.85□□□□□ -1.63
XRCC1P18887 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.85□□□□□ -1.63
XRCC1P18887 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.85□□□□□ -1.63
XRCC1P18887 AL450023.3-201ENST00000440592 271 ntBASIC4.85□□□□□ -1.63
XRCC1P18887 RHEBP2-201ENST00000450289 600 ntBASIC4.85□□□□□ -1.63
XRCC1P18887 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.85□□□□□ -1.63
XRCC1P18887 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.85□□□□□ -1.63
XRCC1P18887 AC083982.1-201ENST00000485679 344 ntBASIC4.85□□□□□ -1.63
XRCC1P18887 AC105233.1-201ENST00000498840 781 ntBASIC4.85□□□□□ -1.63
XRCC1P18887 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.85□□□□□ -1.63
XRCC1P18887 EIF4A2P5-201ENST00000529914 499 ntBASIC4.85□□□□□ -1.63
XRCC1P18887 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.85□□□□□ -1.63
XRCC1P18887 AC084759.1-201ENST00000561168 290 ntBASIC4.85□□□□□ -1.63
XRCC1P18887 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.85□□□□□ -1.63
XRCC1P18887 AC009117.1-201ENST00000563948 554 ntBASIC4.85□□□□□ -1.63
XRCC1P18887 AC116553.2-201ENST00000564203 463 ntBASIC4.85□□□□□ -1.63
XRCC1P18887 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.85□□□□□ -1.63
XRCC1P18887 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
XRCC1P18887 EIF1P5-201ENST00000585002 234 ntBASIC4.85□□□□□ -1.63
XRCC1P18887 AC117490.2-201ENST00000610042 594 ntBASIC4.85□□□□□ -1.63
XRCC1P18887 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.85□□□□□ -1.63
XRCC1P18887 AC091953.3-201ENST00000623220 236 ntBASIC4.85□□□□□ -1.63
XRCC1P18887 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.85□□□□□ -1.63
XRCC1P18887 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
XRCC1P18887 AL133268.1-201ENST00000405676 1401 ntBASIC4.85□□□□□ -1.63
XRCC1P18887 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
XRCC1P18887 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.85□□□□□ -1.63
XRCC1P18887 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
XRCC1P18887 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.85□□□□□ -1.63
XRCC1P18887 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
XRCC1P18887 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
XRCC1P18887 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
XRCC1P18887 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
XRCC1P18887 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
XRCC1P18887 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
XRCC1P18887 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
XRCC1P18887 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.84□□□□□ -1.63
XRCC1P18887 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
XRCC1P18887 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
XRCC1P18887 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
XRCC1P18887 ECM1P2-201ENST00000503354 1577 ntBASIC4.84□□□□□ -1.63
XRCC1P18887 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.84□□□□□ -1.63
XRCC1P18887 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
XRCC1P18887 AC068446.1-201ENST00000556425 1549 ntBASIC4.84□□□□□ -1.63
XRCC1P18887 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
XRCC1P18887 AC007342.9-201ENST00000623877 1385 ntBASIC4.84□□□□□ -1.63
XRCC1P18887 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.84□□□□□ -1.63
XRCC1P18887 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
XRCC1P18887 RNA5SP87-201ENST00000384155 118 ntBASIC4.84□□□□□ -1.63
XRCC1P18887 VDAC2P1-201ENST00000399358 958 ntBASIC4.84□□□□□ -1.63
XRCC1P18887 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
XRCC1P18887 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.84□□□□□ -1.63
XRCC1P18887 RFESDP1-201ENST00000422350 461 ntBASIC4.84□□□□□ -1.63
XRCC1P18887 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.84□□□□□ -1.63
XRCC1P18887 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.84□□□□□ -1.63
XRCC1P18887 CKS1BP6-201ENST00000424932 240 ntBASIC4.84□□□□□ -1.63
XRCC1P18887 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.84□□□□□ -1.63
XRCC1P18887 FABP7P2-201ENST00000429946 379 ntBASIC4.84□□□□□ -1.63
XRCC1P18887 AL049745.1-201ENST00000433953 286 ntBASIC4.84□□□□□ -1.63
XRCC1P18887 TXNP5-201ENST00000441043 315 ntBASIC4.84□□□□□ -1.63
XRCC1P18887 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
XRCC1P18887 OR52J1P-201ENST00000450596 932 ntBASIC4.84□□□□□ -1.63
XRCC1P18887 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.84□□□□□ -1.63
XRCC1P18887 CYCSP34-201ENST00000458172 304 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms