Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
CTLA4P16410 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CTLA4P16410 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CTLA4P16410 PCAT14-202ENST00000627127 3935 ntBASIC4.13□□□□□ -1.75
CTLA4P16410 MAPK10-303ENST00000641324 3959 ntBASIC4.13□□□□□ -1.75
CTLA4P16410 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CTLA4P16410 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CTLA4P16410 MIR921-201ENST00000401133 56 ntBASIC4.13□□□□□ -1.75
CTLA4P16410 AL109941.1-201ENST00000401925 229 ntBASIC4.13□□□□□ -1.75
CTLA4P16410 RNA5SP113-201ENST00000410486 84 ntBASIC4.13□□□□□ -1.75
CTLA4P16410 RN7SKP278-201ENST00000410504 342 ntBASIC4.13□□□□□ -1.75
CTLA4P16410 RPL21P43-201ENST00000425440 472 ntBASIC4.13□□□□□ -1.75
CTLA4P16410 HSPE1P16-201ENST00000426640 348 ntBASIC4.13□□□□□ -1.75
CTLA4P16410 NRBF2P3-201ENST00000432731 865 ntBASIC4.13□□□□□ -1.75
CTLA4P16410 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CTLA4P16410 H2AFZP5-201ENST00000446960 382 ntBASIC4.13□□□□□ -1.75
CTLA4P16410 AC108463.1-201ENST00000450258 347 ntBASIC4.13□□□□□ -1.75
CTLA4P16410 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC4.13□□□□□ -1.75
CTLA4P16410 AC063943.1-201ENST00000465434 453 ntBASIC4.13□□□□□ -1.75
CTLA4P16410 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC4.13□□□□□ -1.75
CTLA4P16410 RPL5P22-201ENST00000480199 884 ntBASIC4.13□□□□□ -1.75
CTLA4P16410 OR9N1P-201ENST00000491296 333 ntBASIC4.13□□□□□ -1.75
CTLA4P16410 AC008638.1-201ENST00000506035 866 ntBASIC4.13□□□□□ -1.75
CTLA4P16410 RNA5SP464-201ENST00000516251 108 ntBASIC4.13□□□□□ -1.75
CTLA4P16410 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.13□□□□□ -1.75
CTLA4P16410 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CTLA4P16410 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.13□□□□□ -1.75
CTLA4P16410 AC105036.1-201ENST00000566222 271 ntBASIC4.13□□□□□ -1.75
CTLA4P16410 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.13□□□□□ -1.75
CTLA4P16410 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CTLA4P16410 AL391358.1-201ENST00000605342 190 ntBASIC4.13□□□□□ -1.75
CTLA4P16410 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.13□□□□□ -1.75
CTLA4P16410 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CTLA4P16410 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.13□□□□□ -1.75
CTLA4P16410 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CTLA4P16410 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.13□□□□□ -1.75
CTLA4P16410 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.13□□□□□ -1.75
CTLA4P16410 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CTLA4P16410 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.13□□□□□ -1.75
CTLA4P16410 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
CTLA4P16410 MAPK10-320ENST00000641462 6696 ntBASIC4.13□□□□□ -1.75
CTLA4P16410 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CTLA4P16410 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.12□□□□□ -1.75
CTLA4P16410 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CTLA4P16410 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CTLA4P16410 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CTLA4P16410 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CTLA4P16410 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CTLA4P16410 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CTLA4P16410 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CTLA4P16410 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CTLA4P16410 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CTLA4P16410 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.12□□□□□ -1.75
CTLA4P16410 AL645927.1-201ENST00000396783 406 ntBASIC4.12□□□□□ -1.75
CTLA4P16410 GAPDHP15-201ENST00000398586 975 ntBASIC4.12□□□□□ -1.75
CTLA4P16410 SETP15-201ENST00000412724 337 ntBASIC4.12□□□□□ -1.75
CTLA4P16410 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.12□□□□□ -1.75
CTLA4P16410 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC4.12□□□□□ -1.75
CTLA4P16410 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.12□□□□□ -1.75
CTLA4P16410 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.12□□□□□ -1.75
CTLA4P16410 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.12□□□□□ -1.75
CTLA4P16410 PTMAP6-201ENST00000439110 327 ntBASIC4.12□□□□□ -1.75
CTLA4P16410 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.12□□□□□ -1.75
CTLA4P16410 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CTLA4P16410 RN7SL515P-201ENST00000463999 297 ntBASIC4.12□□□□□ -1.75
CTLA4P16410 AC098583.1-201ENST00000480875 255 ntBASIC4.12□□□□□ -1.75
CTLA4P16410 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.12□□□□□ -1.75
CTLA4P16410 RPL36AP41-201ENST00000493820 306 ntBASIC4.12□□□□□ -1.75
CTLA4P16410 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.12□□□□□ -1.75
CTLA4P16410 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CTLA4P16410 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CTLA4P16410 RNU2-30P-201ENST00000516209 141 ntBASIC4.12□□□□□ -1.75
CTLA4P16410 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.12□□□□□ -1.75
CTLA4P16410 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.12□□□□□ -1.75
CTLA4P16410 EDDM3DP-201ENST00000554692 434 ntBASIC4.12□□□□□ -1.75
CTLA4P16410 RN7SL652P-201ENST00000577769 300 ntBASIC4.12□□□□□ -1.75
CTLA4P16410 AL031320.1-201ENST00000604177 357 ntBASIC4.12□□□□□ -1.75
CTLA4P16410 MIR7155-201ENST00000615925 56 ntBASIC4.12□□□□□ -1.75
CTLA4P16410 AC090510.2-201ENST00000617465 629 ntBASIC4.12□□□□□ -1.75
CTLA4P16410 AC006840.1-201ENST00000623069 542 ntBASIC4.12□□□□□ -1.75
CTLA4P16410 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CTLA4P16410 AC108751.5-201ENST00000492880 1336 ntBASIC4.12□□□□□ -1.75
CTLA4P16410 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CTLA4P16410 AL606537.1-201ENST00000607258 2011 ntBASIC4.12□□□□□ -1.75
CTLA4P16410 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CTLA4P16410 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.12□□□□□ -1.75
CTLA4P16410 AC104260.2-201ENST00000623551 3497 ntBASIC4.12□□□□□ -1.75
CTLA4P16410 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC4.12□□□□□ -1.75
CTLA4P16410 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
CTLA4P16410 AC135352.1-201ENST00000506173 1418 ntBASIC4.12□□□□□ -1.75
CTLA4P16410 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CTLA4P16410 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
CTLA4P16410 AC027228.2-201ENST00000567141 2154 ntBASIC4.12□□□□□ -1.75
CTLA4P16410 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
CTLA4P16410 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC4.11□□□□□ -1.75
CTLA4P16410 HSPD1P14-201ENST00000432666 1618 ntBASIC4.11□□□□□ -1.75
CTLA4P16410 AL391684.1-202ENST00000641293 1636 ntBASIC4.11□□□□□ -1.75
CTLA4P16410 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CTLA4P16410 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.11□□□□□ -1.75
CTLA4P16410 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms