Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.08□□□□□ -1.76
CD74P04233 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CD74P04233 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CD74P04233 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
CD74P04233 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CD74P04233 RNU1-108P-201ENST00000362556 161 ntBASIC4.08□□□□□ -1.76
CD74P04233 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.08□□□□□ -1.76
CD74P04233 SNORA67-201ENST00000384423 137 ntBASIC4.08□□□□□ -1.76
CD74P04233 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CD74P04233 RNU1-77P-201ENST00000390868 162 ntBASIC4.08□□□□□ -1.76
CD74P04233 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CD74P04233 AL391422.1-201ENST00000402155 436 ntBASIC4.08□□□□□ -1.76
CD74P04233 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.08□□□□□ -1.76
CD74P04233 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CD74P04233 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.08□□□□□ -1.76
CD74P04233 AL451142.2-201ENST00000429076 2090 ntBASIC4.08□□□□□ -1.76
CD74P04233 HSPD1P14-201ENST00000432666 1618 ntBASIC4.08□□□□□ -1.76
CD74P04233 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC4.08□□□□□ -1.76
CD74P04233 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.08□□□□□ -1.76
CD74P04233 KNOP1P3-201ENST00000446933 426 ntBASIC4.08□□□□□ -1.76
CD74P04233 AC000111.2-201ENST00000448200 210 ntBASIC4.08□□□□□ -1.76
CD74P04233 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC4.08□□□□□ -1.76
CD74P04233 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.08□□□□□ -1.76
CD74P04233 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CD74P04233 TLK1P1-201ENST00000456760 2440 ntBASIC4.08□□□□□ -1.76
CD74P04233 APOOP2-201ENST00000461561 539 ntBASIC4.08□□□□□ -1.76
CD74P04233 RPS21P4-201ENST00000487122 248 ntBASIC4.08□□□□□ -1.76
CD74P04233 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CD74P04233 IRF5P1-201ENST00000504852 2164 ntBASIC4.08□□□□□ -1.76
CD74P04233 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.08□□□□□ -1.76
CD74P04233 RPL7L1P4-201ENST00000513004 707 ntBASIC4.08□□□□□ -1.76
CD74P04233 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.08□□□□□ -1.76
CD74P04233 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CD74P04233 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.08□□□□□ -1.76
CD74P04233 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC4.08□□□□□ -1.76
CD74P04233 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.08□□□□□ -1.76
CD74P04233 PDCD5P1-201ENST00000543528 309 ntBASIC4.08□□□□□ -1.76
CD74P04233 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.08□□□□□ -1.76
CD74P04233 AC022404.1-201ENST00000555320 273 ntBASIC4.08□□□□□ -1.76
CD74P04233 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.08□□□□□ -1.76
CD74P04233 AC090312.1-201ENST00000580637 348 ntBASIC4.08□□□□□ -1.76
CD74P04233 SNORA74C-1-201ENST00000580726 201 ntBASIC4.08□□□□□ -1.76
CD74P04233 AC209154.1-201ENST00000582156 337 ntBASIC4.08□□□□□ -1.76
CD74P04233 MIR3176-201ENST00000582210 90 ntBASIC4.08□□□□□ -1.76
CD74P04233 AC007448.1-201ENST00000582714 234 ntBASIC4.08□□□□□ -1.76
CD74P04233 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CD74P04233 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.08□□□□□ -1.76
CD74P04233 AL023881.1-201ENST00000621088 301 ntBASIC4.08□□□□□ -1.76
CD74P04233 AC243960.7-201ENST00000623532 707 ntBASIC4.08□□□□□ -1.76
CD74P04233 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.08□□□□□ -1.76
CD74P04233 CASC19-222ENST00000641321 1173 ntBASIC4.08□□□□□ -1.76
CD74P04233 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.08□□□□□ -1.76
CD74P04233 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CD74P04233 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.08□□□□□ -1.76
CD74P04233 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.08□□□□□ -1.76
CD74P04233 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CD74P04233 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.07□□□□□ -1.76
CD74P04233 AL121950.1-201ENST00000624993 2077 ntBASIC4.07□□□□□ -1.76
CD74P04233 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
CD74P04233 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
CD74P04233 ASNSP1-201ENST00000518311 1939 ntBASIC4.07□□□□□ -1.76
CD74P04233 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CD74P04233 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CD74P04233 CASC19-281ENST00000642118 1554 ntBASIC4.07□□□□□ -1.76
CD74P04233 KPNA2P2-201ENST00000419546 1489 ntBASIC4.07□□□□□ -1.76
CD74P04233 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CD74P04233 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CD74P04233 OR56B2P-201ENST00000317102 954 ntBASIC4.07□□□□□ -1.76
CD74P04233 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CD74P04233 MT-RNR1-201ENST00000389680 954 ntBASIC4.07□□□□□ -1.76
CD74P04233 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CD74P04233 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC4.07□□□□□ -1.76
CD74P04233 AL021331.1-201ENST00000402817 582 ntBASIC4.07□□□□□ -1.76
CD74P04233 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.07□□□□□ -1.76
CD74P04233 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CD74P04233 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.07□□□□□ -1.76
CD74P04233 RPL12P43-201ENST00000420608 499 ntBASIC4.07□□□□□ -1.76
CD74P04233 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC4.07□□□□□ -1.76
CD74P04233 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.07□□□□□ -1.76
CD74P04233 AC093414.1-201ENST00000434712 514 ntBASIC4.07□□□□□ -1.76
CD74P04233 AL451139.1-201ENST00000434718 346 ntBASIC4.07□□□□□ -1.76
CD74P04233 AC012075.1-201ENST00000436549 580 ntBASIC4.07□□□□□ -1.76
CD74P04233 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.07□□□□□ -1.76
CD74P04233 AL357520.1-201ENST00000441557 453 ntBASIC4.07□□□□□ -1.76
CD74P04233 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC4.07□□□□□ -1.76
CD74P04233 RN7SL177P-201ENST00000476596 299 ntBASIC4.07□□□□□ -1.76
CD74P04233 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC4.07□□□□□ -1.76
CD74P04233 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.07□□□□□ -1.76
CD74P04233 RNA5SP392-201ENST00000516905 112 ntBASIC4.07□□□□□ -1.76
CD74P04233 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.07□□□□□ -1.76
CD74P04233 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.07□□□□□ -1.76
CD74P04233 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC4.07□□□□□ -1.76
CD74P04233 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CD74P04233 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.07□□□□□ -1.76
CD74P04233 HMGB3P26-201ENST00000560051 582 ntBASIC4.07□□□□□ -1.76
CD74P04233 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC4.07□□□□□ -1.76
CD74P04233 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.07□□□□□ -1.76
CD74P04233 SNORD95-201ENST00000579879 68 ntBASIC4.07□□□□□ -1.76
CD74P04233 RPL7P50-201ENST00000600588 727 ntBASIC4.07□□□□□ -1.76
CD74P04233 SUGT1P3-202ENST00000604259 383 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms