Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
RNF40O75150 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC7.93□□□□□ -1.14
RNF40O75150 Z83820.1-201ENST00000456978 1499 ntBASIC7.93□□□□□ -1.14
RNF40O75150 PFKFB1-203ENST00000545676 1591 ntTSL 2 BASIC7.93□□□□□ -1.14
RNF40O75150 TAB3P1-202ENST00000452645 1634 ntBASIC7.92□□□□□ -1.14
RNF40O75150 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC7.92□□□□□ -1.14
RNF40O75150 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
RNF40O75150 REG1CP-205ENST00000444841 1710 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
RNF40O75150 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
RNF40O75150 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
RNF40O75150 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC7.92□□□□□ -1.14
RNF40O75150 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
RNF40O75150 RNU6-1120P-201ENST00000362988 108 ntBASIC7.92□□□□□ -1.14
RNF40O75150 MDM4-202ENST00000367180 547 ntTSL 3 BASIC7.92□□□□□ -1.14
RNF40O75150 RNU6-452P-201ENST00000384406 107 ntBASIC7.92□□□□□ -1.14
RNF40O75150 Y_RNA.557-201ENST00000384680 107 ntBASIC7.92□□□□□ -1.14
RNF40O75150 HMGB3P2-201ENST00000411913 584 ntBASIC7.92□□□□□ -1.14
RNF40O75150 RPS12P24-201ENST00000412619 387 ntBASIC7.92□□□□□ -1.14
RNF40O75150 RPLP1P10-201ENST00000413972 339 ntBASIC7.92□□□□□ -1.14
RNF40O75150 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
RNF40O75150 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC7.92□□□□□ -1.14
RNF40O75150 AL451054.2-201ENST00000420896 202 ntBASIC7.92□□□□□ -1.14
RNF40O75150 HSPE1P1-201ENST00000421494 318 ntBASIC7.92□□□□□ -1.14
RNF40O75150 MTCYBP10-201ENST00000424905 650 ntBASIC7.92□□□□□ -1.14
RNF40O75150 AC008267.5-201ENST00000424928 265 ntBASIC7.92□□□□□ -1.14
RNF40O75150 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC7.92□□□□□ -1.14
RNF40O75150 ATP5JP1-201ENST00000431631 322 ntBASIC7.92□□□□□ -1.14
RNF40O75150 RPL7P29-201ENST00000437151 728 ntBASIC7.92□□□□□ -1.14
RNF40O75150 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC7.92□□□□□ -1.14
RNF40O75150 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC7.92□□□□□ -1.14
RNF40O75150 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC7.92□□□□□ -1.14
RNF40O75150 RN7SL861P-201ENST00000473793 285 ntBASIC7.92□□□□□ -1.14
RNF40O75150 EIF4EP3-201ENST00000498782 656 ntBASIC7.92□□□□□ -1.14
RNF40O75150 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
RNF40O75150 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC7.92□□□□□ -1.14
RNF40O75150 RNU6-1004P-201ENST00000516584 111 ntBASIC7.92□□□□□ -1.14
RNF40O75150 RNU6-388P-201ENST00000517012 105 ntBASIC7.92□□□□□ -1.14
RNF40O75150 RNU6-389P-201ENST00000517048 105 ntBASIC7.92□□□□□ -1.14
RNF40O75150 RN7SKP98-201ENST00000517070 156 ntBASIC7.92□□□□□ -1.14
RNF40O75150 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC7.92□□□□□ -1.14
RNF40O75150 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC7.92□□□□□ -1.14
RNF40O75150 AC084337.1-201ENST00000524809 686 ntBASIC7.92□□□□□ -1.14
RNF40O75150 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC7.92□□□□□ -1.14
RNF40O75150 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC7.92□□□□□ -1.14
RNF40O75150 OR5BK1P-201ENST00000550421 823 ntBASIC7.92□□□□□ -1.14
RNF40O75150 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC7.92□□□□□ -1.14
RNF40O75150 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC7.92□□□□□ -1.14
RNF40O75150 AC009117.1-201ENST00000563948 554 ntBASIC7.92□□□□□ -1.14
RNF40O75150 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC7.92□□□□□ -1.14
RNF40O75150 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC7.92□□□□□ -1.14
RNF40O75150 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
RNF40O75150 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC7.92□□□□□ -1.14
RNF40O75150 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC7.92□□□□□ -1.14
RNF40O75150 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC7.92□□□□□ -1.14
RNF40O75150 MIR6883-201ENST00000614952 78 ntBASIC7.92□□□□□ -1.14
RNF40O75150 AC090510.2-201ENST00000617465 629 ntBASIC7.92□□□□□ -1.14
RNF40O75150 AP003789.1-201ENST00000617737 605 ntBASIC7.92□□□□□ -1.14
RNF40O75150 SLC20A1P2-201ENST00000618036 966 ntBASIC7.92□□□□□ -1.14
RNF40O75150 AC009161.2-201ENST00000624626 138 ntBASIC7.92□□□□□ -1.14
RNF40O75150 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
RNF40O75150 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC7.92□□□□□ -1.14
RNF40O75150 AC010653.3-201ENST00000635332 232 ntBASIC7.92□□□□□ -1.14
RNF40O75150 AL596275.2-203ENST00000641951 371 ntBASIC7.92□□□□□ -1.14
RNF40O75150 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC7.92□□□□□ -1.14
RNF40O75150 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC7.92□□□□□ -1.14
RNF40O75150 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC7.92□□□□□ -1.14
RNF40O75150 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
RNF40O75150 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
RNF40O75150 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
RNF40O75150 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC7.92□□□□□ -1.14
RNF40O75150 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
RNF40O75150 NOX1-201ENST00000217885 1734 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
RNF40O75150 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC7.92□□□□□ -1.14
RNF40O75150 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC7.92□□□□□ -1.14
RNF40O75150 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC7.92□□□□□ -1.14
RNF40O75150 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC7.91□□□□□ -1.14
RNF40O75150 ZNF567-204ENST00000588311 2042 ntTSL 2 BASIC7.91□□□□□ -1.14
RNF40O75150 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC7.91□□□□□ -1.14
RNF40O75150 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
RNF40O75150 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
RNF40O75150 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
RNF40O75150 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
RNF40O75150 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
RNF40O75150 PIP-201ENST00000291009 585 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
RNF40O75150 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
RNF40O75150 Y_RNA.187-201ENST00000363918 113 ntBASIC7.91□□□□□ -1.14
RNF40O75150 RNU6-777P-201ENST00000364265 104 ntBASIC7.91□□□□□ -1.14
RNF40O75150 RNU6-831P-201ENST00000384548 107 ntBASIC7.91□□□□□ -1.14
RNF40O75150 KCNAB1-202ENST00000389634 1119 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
RNF40O75150 NPM1P38-201ENST00000403835 865 ntBASIC7.91□□□□□ -1.14
RNF40O75150 RN7SKP207-201ENST00000411204 303 ntBASIC7.91□□□□□ -1.14
RNF40O75150 RNU2-64P-201ENST00000411315 191 ntBASIC7.91□□□□□ -1.14
RNF40O75150 RN7SKP30-201ENST00000411373 334 ntBASIC7.91□□□□□ -1.14
RNF40O75150 AL354890.1-201ENST00000413730 346 ntBASIC7.91□□□□□ -1.14
RNF40O75150 BOLA3P4-201ENST00000418151 400 ntBASIC7.91□□□□□ -1.14
RNF40O75150 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC7.91□□□□□ -1.14
RNF40O75150 SDAD1P3-201ENST00000427380 333 ntBASIC7.91□□□□□ -1.14
RNF40O75150 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC7.91□□□□□ -1.14
RNF40O75150 AL354983.1-201ENST00000434580 906 ntBASIC7.91□□□□□ -1.14
RNF40O75150 AL512882.1-201ENST00000436086 832 ntBASIC7.91□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms