Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.79□□□□□ -1.64
PDLIM1O00151 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
PDLIM1O00151 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.79□□□□□ -1.64
PDLIM1O00151 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.79□□□□□ -1.64
PDLIM1O00151 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.79□□□□□ -1.64
PDLIM1O00151 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC4.79□□□□□ -1.64
PDLIM1O00151 MTND6P33-201ENST00000571794 183 ntBASIC4.79□□□□□ -1.64
PDLIM1O00151 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC4.79□□□□□ -1.64
PDLIM1O00151 FKBP1AP1-201ENST00000594588 318 ntBASIC4.79□□□□□ -1.64
PDLIM1O00151 AC025946.2-201ENST00000603398 234 ntBASIC4.79□□□□□ -1.64
PDLIM1O00151 AL512624.1-201ENST00000613638 469 ntBASIC4.79□□□□□ -1.64
PDLIM1O00151 AC118658.2-201ENST00000618697 459 ntBASIC4.79□□□□□ -1.64
PDLIM1O00151 AC005840.5-201ENST00000619166 599 ntBASIC4.79□□□□□ -1.64
PDLIM1O00151 MIR7154-201ENST00000620673 73 ntBASIC4.79□□□□□ -1.64
PDLIM1O00151 AC005086.4-201ENST00000623065 213 ntBASIC4.79□□□□□ -1.64
PDLIM1O00151 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.79□□□□□ -1.64
PDLIM1O00151 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
PDLIM1O00151 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
PDLIM1O00151 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
PDLIM1O00151 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PDLIM1O00151 USP9YP4-201ENST00000424401 1745 ntBASIC4.79□□□□□ -1.64
PDLIM1O00151 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.79□□□□□ -1.64
PDLIM1O00151 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
PDLIM1O00151 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.79□□□□□ -1.64
PDLIM1O00151 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
PDLIM1O00151 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.79□□□□□ -1.64
PDLIM1O00151 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.79□□□□□ -1.64
PDLIM1O00151 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.79□□□□□ -1.64
PDLIM1O00151 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
PDLIM1O00151 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
PDLIM1O00151 AC092435.4-201ENST00000623012 4159 ntBASIC4.79□□□□□ -1.64
PDLIM1O00151 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PDLIM1O00151 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.78□□□□□ -1.64
PDLIM1O00151 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.78□□□□□ -1.64
PDLIM1O00151 CYP4Z2P-201ENST00000423332 1512 ntBASIC4.78□□□□□ -1.64
PDLIM1O00151 SCARNA15-201ENST00000607520 4325 ntBASIC4.78□□□□□ -1.64
PDLIM1O00151 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.78□□□□□ -1.64
PDLIM1O00151 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PDLIM1O00151 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.78□□□□□ -1.64
PDLIM1O00151 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PDLIM1O00151 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
PDLIM1O00151 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.78□□□□□ -1.64
PDLIM1O00151 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.78□□□□□ -1.64
PDLIM1O00151 RNU1-74P-201ENST00000384108 171 ntBASIC4.78□□□□□ -1.64
PDLIM1O00151 RNA5SP339-201ENST00000390987 122 ntBASIC4.78□□□□□ -1.64
PDLIM1O00151 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.78□□□□□ -1.64
PDLIM1O00151 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.78□□□□□ -1.64
PDLIM1O00151 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.78□□□□□ -1.64
PDLIM1O00151 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC4.78□□□□□ -1.64
PDLIM1O00151 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
PDLIM1O00151 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PDLIM1O00151 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.78□□□□□ -1.64
PDLIM1O00151 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.78□□□□□ -1.64
PDLIM1O00151 RN7SKP99-201ENST00000517028 307 ntBASIC4.78□□□□□ -1.64
PDLIM1O00151 IGLVIV-53-201ENST00000520107 367 ntBASIC4.78□□□□□ -1.64
PDLIM1O00151 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.78□□□□□ -1.64
PDLIM1O00151 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.78□□□□□ -1.64
PDLIM1O00151 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.78□□□□□ -1.64
PDLIM1O00151 YWHABP2-201ENST00000540201 713 ntBASIC4.78□□□□□ -1.64
PDLIM1O00151 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.78□□□□□ -1.64
PDLIM1O00151 ATP5J2P6-201ENST00000565203 266 ntBASIC4.78□□□□□ -1.64
PDLIM1O00151 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
PDLIM1O00151 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PDLIM1O00151 MIR4489-201ENST00000578869 62 ntBASIC4.78□□□□□ -1.64
PDLIM1O00151 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.78□□□□□ -1.64
PDLIM1O00151 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.78□□□□□ -1.64
PDLIM1O00151 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.78□□□□□ -1.64
PDLIM1O00151 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.78□□□□□ -1.64
PDLIM1O00151 AC020634.1-201ENST00000608701 549 ntBASIC4.78□□□□□ -1.64
PDLIM1O00151 AP000894.4-201ENST00000610185 483 ntBASIC4.78□□□□□ -1.64
PDLIM1O00151 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC4.78□□□□□ -1.64
PDLIM1O00151 MIR6837-201ENST00000620884 64 ntBASIC4.78□□□□□ -1.64
PDLIM1O00151 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.78□□□□□ -1.64
PDLIM1O00151 SAMMSON-209ENST00000641222 1100 ntBASIC4.78□□□□□ -1.64
PDLIM1O00151 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PDLIM1O00151 IQCB2P-201ENST00000401788 1633 ntBASIC4.78□□□□□ -1.64
PDLIM1O00151 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PDLIM1O00151 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
PDLIM1O00151 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
PDLIM1O00151 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PDLIM1O00151 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
PDLIM1O00151 AC093535.2-201ENST00000624769 2326 ntBASIC4.78□□□□□ -1.64
PDLIM1O00151 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.78□□□□□ -1.64
PDLIM1O00151 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
PDLIM1O00151 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.65
PDLIM1O00151 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
PDLIM1O00151 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PDLIM1O00151 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
PDLIM1O00151 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
PDLIM1O00151 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PDLIM1O00151 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.77□□□□□ -1.65
PDLIM1O00151 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.77□□□□□ -1.65
PDLIM1O00151 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.77□□□□□ -1.65
PDLIM1O00151 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.77□□□□□ -1.65
PDLIM1O00151 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PDLIM1O00151 MIR365B-201ENST00000362317 111 ntBASIC4.77□□□□□ -1.65
PDLIM1O00151 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC4.77□□□□□ -1.65
PDLIM1O00151 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
PDLIM1O00151 AL592291.1-201ENST00000403830 352 ntBASIC4.77□□□□□ -1.65
PDLIM1O00151 AL133388.1-201ENST00000404509 287 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms