Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 RLIMP2-201ENST00000427891 1563 ntBASIC5.71□□□□□ -1.5
CCDC78A2IDD5 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
CCDC78A2IDD5 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC78A2IDD5 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC78A2IDD5 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC78A2IDD5 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC78A2IDD5 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.7□□□□□ -1.5
CCDC78A2IDD5 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC78A2IDD5 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC78A2IDD5 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC78A2IDD5 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC78A2IDD5 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC78A2IDD5 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC78A2IDD5 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC78A2IDD5 Y_RNA.318-201ENST00000365131 97 ntBASIC5.7□□□□□ -1.5
CCDC78A2IDD5 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC78A2IDD5 RNU1-136P-201ENST00000384181 164 ntBASIC5.7□□□□□ -1.5
CCDC78A2IDD5 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC78A2IDD5 ATF1P1-201ENST00000406040 927 ntBASIC5.7□□□□□ -1.5
CCDC78A2IDD5 AL512422.1-201ENST00000407033 553 ntBASIC5.7□□□□□ -1.5
CCDC78A2IDD5 RN7SKP206-201ENST00000410823 293 ntBASIC5.7□□□□□ -1.5
CCDC78A2IDD5 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC78A2IDD5 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC78A2IDD5 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC78A2IDD5 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC78A2IDD5 AC127526.2-201ENST00000426436 775 ntBASIC5.7□□□□□ -1.5
CCDC78A2IDD5 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC78A2IDD5 ETF1P3-201ENST00000430422 1160 ntBASIC5.7□□□□□ -1.5
CCDC78A2IDD5 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC78A2IDD5 AL008629.1-201ENST00000438615 184 ntBASIC5.7□□□□□ -1.5
CCDC78A2IDD5 MTCYBP12-201ENST00000440559 1134 ntBASIC5.7□□□□□ -1.5
CCDC78A2IDD5 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC78A2IDD5 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC78A2IDD5 EXTL2P1-201ENST00000446218 416 ntBASIC5.7□□□□□ -1.5
CCDC78A2IDD5 AC069540.1-201ENST00000446320 988 ntBASIC5.7□□□□□ -1.5
CCDC78A2IDD5 RNF148-202ENST00000447240 839 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC78A2IDD5 NPM1P19-201ENST00000450070 712 ntBASIC5.7□□□□□ -1.5
CCDC78A2IDD5 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC78A2IDD5 ART2BP-201ENST00000453501 499 ntBASIC5.7□□□□□ -1.5
CCDC78A2IDD5 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC78A2IDD5 ABCC13-202ENST00000463099 3842 ntBASIC5.7□□□□□ -1.5
CCDC78A2IDD5 AC073610.1-201ENST00000489971 396 ntBASIC5.7□□□□□ -1.5
CCDC78A2IDD5 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC78A2IDD5 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC78A2IDD5 GAPDHP62-201ENST00000515313 990 ntBASIC5.7□□□□□ -1.5
CCDC78A2IDD5 IGLV3-24-201ENST00000517477 197 ntBASIC5.7□□□□□ -1.5
CCDC78A2IDD5 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC78A2IDD5 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC78A2IDD5 OR8Q1P-201ENST00000526467 655 ntBASIC5.7□□□□□ -1.5
CCDC78A2IDD5 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC78A2IDD5 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.7□□□□□ -1.5
CCDC78A2IDD5 AC084824.1-201ENST00000550917 1005 ntBASIC5.7□□□□□ -1.5
CCDC78A2IDD5 AGGF1P7-201ENST00000562369 913 ntBASIC5.7□□□□□ -1.5
CCDC78A2IDD5 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC78A2IDD5 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC78A2IDD5 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC78A2IDD5 AL358072.1-201ENST00000604156 575 ntBASIC5.7□□□□□ -1.5
CCDC78A2IDD5 AC121247.2-201ENST00000604776 136 ntBASIC5.7□□□□□ -1.5
CCDC78A2IDD5 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC78A2IDD5 TUSC7.1-201ENST00000610969 165 ntBASIC5.7□□□□□ -1.5
CCDC78A2IDD5 AL392048.1-201ENST00000613946 534 ntBASIC5.7□□□□□ -1.5
CCDC78A2IDD5 AL603755.1-201ENST00000619504 163 ntBASIC5.7□□□□□ -1.5
CCDC78A2IDD5 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC78A2IDD5 MIR1322-201ENST00000638013 71 ntBASIC5.7□□□□□ -1.5
CCDC78A2IDD5 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CCDC78A2IDD5 AC139713.2-210ENST00000641741 992 ntBASIC5.7□□□□□ -1.5
CCDC78A2IDD5 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
CCDC78A2IDD5 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC78A2IDD5 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC78A2IDD5 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC78A2IDD5 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC78A2IDD5 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC78A2IDD5 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CCDC78A2IDD5 AL022322.2-201ENST00000624072 20397 ntBASIC5.7□□□□□ -1.5
CCDC78A2IDD5 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC78A2IDD5 SPATA2P1-201ENST00000431223 2055 ntBASIC5.7□□□□□ -1.5
CCDC78A2IDD5 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC78A2IDD5 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CCDC78A2IDD5 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC78A2IDD5 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.69□□□□□ -1.5
CCDC78A2IDD5 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.69□□□□□ -1.5
CCDC78A2IDD5 AC093671.1-201ENST00000624981 2929 ntBASIC5.69□□□□□ -1.5
CCDC78A2IDD5 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC78A2IDD5 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC78A2IDD5 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC78A2IDD5 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC5.69□□□□□ -1.5
CCDC78A2IDD5 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC78A2IDD5 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC78A2IDD5 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC78A2IDD5 SNORA51.1-201ENST00000363243 140 ntBASIC5.69□□□□□ -1.5
CCDC78A2IDD5 Y_RNA.169-201ENST00000363745 96 ntBASIC5.69□□□□□ -1.5
CCDC78A2IDD5 RN7SKP81-201ENST00000365603 331 ntBASIC5.69□□□□□ -1.5
CCDC78A2IDD5 SNORD116-12-201ENST00000384468 92 ntBASIC5.69□□□□□ -1.5
CCDC78A2IDD5 AL136131.1-201ENST00000406079 803 ntBASIC5.69□□□□□ -1.5
CCDC78A2IDD5 RPSAP35-201ENST00000413753 818 ntBASIC5.69□□□□□ -1.5
CCDC78A2IDD5 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.69□□□□□ -1.5
CCDC78A2IDD5 SEPT2P1-201ENST00000419651 180 ntBASIC5.69□□□□□ -1.5
CCDC78A2IDD5 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC78A2IDD5 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.69□□□□□ -1.5
CCDC78A2IDD5 MTCO3P30-201ENST00000426425 670 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms