Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 MAPK10-349ENST00000641767 3661 ntBASIC4.15□□□□□ -1.75
TRAV27A0A087WT01 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
TRAV27A0A087WT01 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
TRAV27A0A087WT01 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.15□□□□□ -1.75
TRAV27A0A087WT01 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.15□□□□□ -1.75
TRAV27A0A087WT01 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.15□□□□□ -1.75
TRAV27A0A087WT01 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.14□□□□□ -1.75
TRAV27A0A087WT01 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TRAV27A0A087WT01 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TRAV27A0A087WT01 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
TRAV27A0A087WT01 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.14□□□□□ -1.75
TRAV27A0A087WT01 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
TRAV27A0A087WT01 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
TRAV27A0A087WT01 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
TRAV27A0A087WT01 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TRAV27A0A087WT01 Z98745.1-201ENST00000402553 494 ntBASIC4.14□□□□□ -1.75
TRAV27A0A087WT01 RNA5SP113-201ENST00000410486 84 ntBASIC4.14□□□□□ -1.75
TRAV27A0A087WT01 AC009237.10-201ENST00000414112 510 ntBASIC4.14□□□□□ -1.75
TRAV27A0A087WT01 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.14□□□□□ -1.75
TRAV27A0A087WT01 AC004448.2-201ENST00000422360 586 ntBASIC4.14□□□□□ -1.75
TRAV27A0A087WT01 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.14□□□□□ -1.75
TRAV27A0A087WT01 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.14□□□□□ -1.75
TRAV27A0A087WT01 ISCUP1-201ENST00000454451 448 ntBASIC4.14□□□□□ -1.75
TRAV27A0A087WT01 AC104763.1-201ENST00000475274 360 ntBASIC4.14□□□□□ -1.75
TRAV27A0A087WT01 RPL7P16-201ENST00000479738 738 ntBASIC4.14□□□□□ -1.75
TRAV27A0A087WT01 AC108022.1-201ENST00000493466 478 ntBASIC4.14□□□□□ -1.75
TRAV27A0A087WT01 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.14□□□□□ -1.75
TRAV27A0A087WT01 SOX5P1-201ENST00000524155 1127 ntBASIC4.14□□□□□ -1.75
TRAV27A0A087WT01 AP000859.1-201ENST00000525536 307 ntBASIC4.14□□□□□ -1.75
TRAV27A0A087WT01 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TRAV27A0A087WT01 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TRAV27A0A087WT01 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.14□□□□□ -1.75
TRAV27A0A087WT01 AL110118.1-201ENST00000553543 400 ntBASIC4.14□□□□□ -1.75
TRAV27A0A087WT01 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.14□□□□□ -1.75
TRAV27A0A087WT01 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC4.14□□□□□ -1.75
TRAV27A0A087WT01 MIR3667-201ENST00000581025 74 ntBASIC4.14□□□□□ -1.75
TRAV27A0A087WT01 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
TRAV27A0A087WT01 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.14□□□□□ -1.75
TRAV27A0A087WT01 AC103792.1-201ENST00000603591 919 ntBASIC4.14□□□□□ -1.75
TRAV27A0A087WT01 AC016769.4-201ENST00000616893 535 ntBASIC4.14□□□□□ -1.75
TRAV27A0A087WT01 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.14□□□□□ -1.75
TRAV27A0A087WT01 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
TRAV27A0A087WT01 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TRAV27A0A087WT01 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TRAV27A0A087WT01 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TRAV27A0A087WT01 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TRAV27A0A087WT01 AP001273.1-201ENST00000624493 3152 ntBASIC4.13□□□□□ -1.75
TRAV27A0A087WT01 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TRAV27A0A087WT01 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TRAV27A0A087WT01 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
TRAV27A0A087WT01 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.13□□□□□ -1.75
TRAV27A0A087WT01 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TRAV27A0A087WT01 OR5AQ1P-202ENST00000641257 1534 ntBASIC4.13□□□□□ -1.75
TRAV27A0A087WT01 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
TRAV27A0A087WT01 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
TRAV27A0A087WT01 RN7SKP269-201ENST00000365545 319 ntBASIC4.13□□□□□ -1.75
TRAV27A0A087WT01 RNA5SP372-201ENST00000390836 115 ntBASIC4.13□□□□□ -1.75
TRAV27A0A087WT01 HDGFP1-201ENST00000405943 252 ntBASIC4.13□□□□□ -1.75
TRAV27A0A087WT01 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.13□□□□□ -1.75
TRAV27A0A087WT01 RN7SKP167-201ENST00000411047 285 ntBASIC4.13□□□□□ -1.75
TRAV27A0A087WT01 SETP15-201ENST00000412724 337 ntBASIC4.13□□□□□ -1.75
TRAV27A0A087WT01 OR6C64P-201ENST00000419708 825 ntBASIC4.13□□□□□ -1.75
TRAV27A0A087WT01 AC016831.4-201ENST00000438302 307 ntBASIC4.13□□□□□ -1.75
TRAV27A0A087WT01 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.13□□□□□ -1.75
TRAV27A0A087WT01 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.13□□□□□ -1.75
TRAV27A0A087WT01 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.13□□□□□ -1.75
TRAV27A0A087WT01 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.13□□□□□ -1.75
TRAV27A0A087WT01 RN7SL41P-201ENST00000476144 297 ntBASIC4.13□□□□□ -1.75
TRAV27A0A087WT01 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.13□□□□□ -1.75
TRAV27A0A087WT01 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.13□□□□□ -1.75
TRAV27A0A087WT01 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC4.13□□□□□ -1.75
TRAV27A0A087WT01 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.13□□□□□ -1.75
TRAV27A0A087WT01 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.13□□□□□ -1.75
TRAV27A0A087WT01 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.13□□□□□ -1.75
TRAV27A0A087WT01 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.13□□□□□ -1.75
TRAV27A0A087WT01 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.13□□□□□ -1.75
TRAV27A0A087WT01 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.13□□□□□ -1.75
TRAV27A0A087WT01 EDDM3DP-201ENST00000554692 434 ntBASIC4.13□□□□□ -1.75
TRAV27A0A087WT01 ADAD1P2-201ENST00000588476 646 ntBASIC4.13□□□□□ -1.75
TRAV27A0A087WT01 SLC25A36P1-201ENST00000590111 465 ntBASIC4.13□□□□□ -1.75
TRAV27A0A087WT01 RPL7P50-201ENST00000600588 727 ntBASIC4.13□□□□□ -1.75
TRAV27A0A087WT01 AL512782.1-201ENST00000603093 364 ntBASIC4.13□□□□□ -1.75
TRAV27A0A087WT01 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.13□□□□□ -1.75
TRAV27A0A087WT01 RNU6-84P-201ENST00000607737 102 ntBASIC4.13□□□□□ -1.75
TRAV27A0A087WT01 MIR6853-201ENST00000619642 74 ntBASIC4.13□□□□□ -1.75
TRAV27A0A087WT01 U3.53-201ENST00000628922 216 ntBASIC4.13□□□□□ -1.75
TRAV27A0A087WT01 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
TRAV27A0A087WT01 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TRAV27A0A087WT01 AC112255.1-201ENST00000624070 2493 ntBASIC4.13□□□□□ -1.75
TRAV27A0A087WT01 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TRAV27A0A087WT01 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.12□□□□□ -1.75
TRAV27A0A087WT01 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
TRAV27A0A087WT01 RARSP1-201ENST00000542842 1418 ntBASIC4.12□□□□□ -1.75
TRAV27A0A087WT01 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TRAV27A0A087WT01 AL513548.1-201ENST00000562904 1724 ntBASIC4.12□□□□□ -1.75
TRAV27A0A087WT01 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TRAV27A0A087WT01 CR788268.1-201ENST00000603931 1809 ntBASIC4.12□□□□□ -1.75
TRAV27A0A087WT01 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.12□□□□□ -1.75
TRAV27A0A087WT01 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
TRAV27A0A087WT01 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms