Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 RPS19P6-201ENST00000441327 433 ntBASIC9.33□□□□□ -0.92
TRIM35Q9UPQ4 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC9.33□□□□□ -0.92
TRIM35Q9UPQ4 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC9.33□□□□□ -0.92
TRIM35Q9UPQ4 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC9.33□□□□□ -0.92
TRIM35Q9UPQ4 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC9.33□□□□□ -0.92
TRIM35Q9UPQ4 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC9.33□□□□□ -0.92
TRIM35Q9UPQ4 RPSAP48-201ENST00000466509 889 ntBASIC9.33□□□□□ -0.92
TRIM35Q9UPQ4 RPL10P7-201ENST00000495649 625 ntBASIC9.33□□□□□ -0.92
TRIM35Q9UPQ4 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC9.33□□□□□ -0.92
TRIM35Q9UPQ4 RN7SKP233-201ENST00000517005 110 ntBASIC9.33□□□□□ -0.92
TRIM35Q9UPQ4 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
TRIM35Q9UPQ4 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC9.33□□□□□ -0.92
TRIM35Q9UPQ4 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC9.33□□□□□ -0.92
TRIM35Q9UPQ4 AL031846.1-201ENST00000560933 314 ntBASIC9.33□□□□□ -0.92
TRIM35Q9UPQ4 AC010463.3-201ENST00000594077 500 ntBASIC9.33□□□□□ -0.92
TRIM35Q9UPQ4 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC9.33□□□□□ -0.92
TRIM35Q9UPQ4 AL121985.3-201ENST00000620690 523 ntBASIC9.33□□□□□ -0.92
TRIM35Q9UPQ4 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
TRIM35Q9UPQ4 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC9.33□□□□□ -0.92
TRIM35Q9UPQ4 ENSA-215ENST00000638926 360 ntTSL 5 BASIC9.33□□□□□ -0.92
TRIM35Q9UPQ4 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC9.33□□□□□ -0.92
TRIM35Q9UPQ4 FAM19A2-211ENST00000550003 2499 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
TRIM35Q9UPQ4 CDH17-202ENST00000441892 2204 ntTSL 2 BASIC9.33□□□□□ -0.92
TRIM35Q9UPQ4 CD200-202ENST00000383681 1997 ntTSL 2 BASIC9.33□□□□□ -0.92
TRIM35Q9UPQ4 NANOG-201ENST00000229307 5183 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
TRIM35Q9UPQ4 PKHD1-201ENST00000340994 11589 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
TRIM35Q9UPQ4 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
TRIM35Q9UPQ4 DHX32-202ENST00000368721 2389 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
TRIM35Q9UPQ4 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
TRIM35Q9UPQ4 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
TRIM35Q9UPQ4 LINC02035-201ENST00000610128 5476 ntBASIC9.32□□□□□ -0.92
TRIM35Q9UPQ4 MTND5P7-201ENST00000413558 1798 ntBASIC9.32□□□□□ -0.92
TRIM35Q9UPQ4 AL353898.3-201ENST00000624679 1755 ntBASIC9.32□□□□□ -0.92
TRIM35Q9UPQ4 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC9.32□□□□□ -0.92
TRIM35Q9UPQ4 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
TRIM35Q9UPQ4 AFG1L-201ENST00000368977 5208 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
TRIM35Q9UPQ4 SLC5A1-204ENST00000543737 4752 ntTSL 2 BASIC9.32□□□□□ -0.92
TRIM35Q9UPQ4 B4GALNT2-202ENST00000393354 8657 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
TRIM35Q9UPQ4 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC9.32□□□□□ -0.92
TRIM35Q9UPQ4 MFF-206ENST00000392059 1710 ntTSL 5 BASIC9.32□□□□□ -0.92
TRIM35Q9UPQ4 RNU6-874P-201ENST00000362390 105 ntBASIC9.32□□□□□ -0.92
TRIM35Q9UPQ4 Y_RNA.301-201ENST00000364990 103 ntBASIC9.32□□□□□ -0.92
TRIM35Q9UPQ4 RNU6-1109P-201ENST00000391187 107 ntBASIC9.32□□□□□ -0.92
TRIM35Q9UPQ4 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC9.32□□□□□ -0.92
TRIM35Q9UPQ4 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC9.32□□□□□ -0.92
TRIM35Q9UPQ4 OR10T1P-201ENST00000424327 947 ntBASIC9.32□□□□□ -0.92
TRIM35Q9UPQ4 Z93242.1-201ENST00000427102 353 ntBASIC9.32□□□□□ -0.92
TRIM35Q9UPQ4 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC9.32□□□□□ -0.92
TRIM35Q9UPQ4 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC9.32□□□□□ -0.92
TRIM35Q9UPQ4 AC092013.1-201ENST00000438795 332 ntBASIC9.32□□□□□ -0.92
TRIM35Q9UPQ4 AL592114.2-201ENST00000440142 532 ntBASIC9.32□□□□□ -0.92
TRIM35Q9UPQ4 RN7SL325P-201ENST00000460434 283 ntBASIC9.32□□□□□ -0.92
TRIM35Q9UPQ4 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
TRIM35Q9UPQ4 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
TRIM35Q9UPQ4 AC122714.1-201ENST00000502510 459 ntBASIC9.32□□□□□ -0.92
TRIM35Q9UPQ4 HIGD1AP14-201ENST00000507617 282 ntBASIC9.32□□□□□ -0.92
TRIM35Q9UPQ4 AC026784.1-201ENST00000507986 352 ntBASIC9.32□□□□□ -0.92
TRIM35Q9UPQ4 Y_RNA.680-201ENST00000516441 93 ntBASIC9.32□□□□□ -0.92
TRIM35Q9UPQ4 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC9.32□□□□□ -0.92
TRIM35Q9UPQ4 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC9.32□□□□□ -0.92
TRIM35Q9UPQ4 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
TRIM35Q9UPQ4 OR5M6P-201ENST00000530227 937 ntBASIC9.32□□□□□ -0.92
TRIM35Q9UPQ4 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC9.32□□□□□ -0.92
TRIM35Q9UPQ4 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC9.32□□□□□ -0.92
TRIM35Q9UPQ4 CASP1-216ENST00000534497 825 ntTSL 5 BASIC9.32□□□□□ -0.92
TRIM35Q9UPQ4 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
TRIM35Q9UPQ4 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC9.32□□□□□ -0.92
TRIM35Q9UPQ4 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC9.32□□□□□ -0.92
TRIM35Q9UPQ4 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC9.32□□□□□ -0.92
TRIM35Q9UPQ4 AC015922.4-201ENST00000612568 690 ntBASIC9.32□□□□□ -0.92
TRIM35Q9UPQ4 AL096712.1-201ENST00000614561 159 ntBASIC9.32□□□□□ -0.92
TRIM35Q9UPQ4 AC007485.1-201ENST00000616755 206 ntBASIC9.32□□□□□ -0.92
TRIM35Q9UPQ4 uc_338.11-201ENST00000619132 160 ntBASIC9.32□□□□□ -0.92
TRIM35Q9UPQ4 AC243312.2-201ENST00000623340 601 ntBASIC9.32□□□□□ -0.92
TRIM35Q9UPQ4 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
TRIM35Q9UPQ4 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
TRIM35Q9UPQ4 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC9.32□□□□□ -0.92
TRIM35Q9UPQ4 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC9.32□□□□□ -0.92
TRIM35Q9UPQ4 GPR151-201ENST00000311104 3088 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
TRIM35Q9UPQ4 MAVS-201ENST00000416600 11596 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
TRIM35Q9UPQ4 CLASP2-213ENST00000480013 5972 ntTSL 5 BASIC9.32□□□□□ -0.92
TRIM35Q9UPQ4 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
TRIM35Q9UPQ4 TANK-205ENST00000405852 2155 ntTSL 5 BASIC9.31□□□□□ -0.92
TRIM35Q9UPQ4 ESRG-201ENST00000583516 3140 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
TRIM35Q9UPQ4 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
TRIM35Q9UPQ4 MED6-212ENST00000615788 1700 ntTSL 5 BASIC9.31□□□□□ -0.92
TRIM35Q9UPQ4 OPCML-203ENST00000524381 6424 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
TRIM35Q9UPQ4 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC9.31□□□□□ -0.92
TRIM35Q9UPQ4 KAT7-201ENST00000259021 9644 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
TRIM35Q9UPQ4 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
TRIM35Q9UPQ4 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC9.31□□□□□ -0.92
TRIM35Q9UPQ4 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
TRIM35Q9UPQ4 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
TRIM35Q9UPQ4 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC9.31□□□□□ -0.92
TRIM35Q9UPQ4 RPL31P52-201ENST00000407532 367 ntBASIC9.31□□□□□ -0.92
TRIM35Q9UPQ4 Y_RNA.615-201ENST00000410769 117 ntBASIC9.31□□□□□ -0.92
TRIM35Q9UPQ4 TMBIM7P-201ENST00000418074 855 ntBASIC9.31□□□□□ -0.92
TRIM35Q9UPQ4 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC9.31□□□□□ -0.92
TRIM35Q9UPQ4 AL953862.1-201ENST00000423016 168 ntBASIC9.31□□□□□ -0.92
TRIM35Q9UPQ4 Z68868.1-201ENST00000429048 544 ntBASIC9.31□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms