Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
BHLHE41Q9C0J9 RNY4P34-201ENST00000364779 95 ntBASIC6.47□□□□□ -1.37
BHLHE41Q9C0J9 RNU12-2P-201ENST00000364789 156 ntBASIC6.47□□□□□ -1.37
BHLHE41Q9C0J9 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
BHLHE41Q9C0J9 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC6.47□□□□□ -1.37
BHLHE41Q9C0J9 Y_RNA.409-201ENST00000383990 98 ntBASIC6.47□□□□□ -1.37
BHLHE41Q9C0J9 Y_RNA.548-201ENST00000384656 105 ntBASIC6.47□□□□□ -1.37
BHLHE41Q9C0J9 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
BHLHE41Q9C0J9 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC6.47□□□□□ -1.37
BHLHE41Q9C0J9 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC6.47□□□□□ -1.37
BHLHE41Q9C0J9 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
BHLHE41Q9C0J9 AL138479.1-201ENST00000426913 484 ntBASIC6.47□□□□□ -1.37
BHLHE41Q9C0J9 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
BHLHE41Q9C0J9 RPL7P11-201ENST00000437586 658 ntBASIC6.47□□□□□ -1.37
BHLHE41Q9C0J9 AC002504.1-201ENST00000438281 691 ntBASIC6.47□□□□□ -1.37
BHLHE41Q9C0J9 PGBD4P3-201ENST00000440731 581 ntBASIC6.47□□□□□ -1.37
BHLHE41Q9C0J9 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC6.47□□□□□ -1.37
BHLHE41Q9C0J9 AC007677.1-201ENST00000445757 515 ntBASIC6.47□□□□□ -1.37
BHLHE41Q9C0J9 GOT2P2-201ENST00000450663 1251 ntBASIC6.47□□□□□ -1.37
BHLHE41Q9C0J9 RAD23BP3-201ENST00000454157 1152 ntBASIC6.47□□□□□ -1.37
BHLHE41Q9C0J9 AC019084.1-201ENST00000457337 432 ntBASIC6.47□□□□□ -1.37
BHLHE41Q9C0J9 RN7SL561P-201ENST00000488553 281 ntBASIC6.47□□□□□ -1.37
BHLHE41Q9C0J9 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC6.47□□□□□ -1.37
BHLHE41Q9C0J9 RN7SL187P-201ENST00000495587 303 ntBASIC6.47□□□□□ -1.37
BHLHE41Q9C0J9 RN7SL143P-201ENST00000496780 297 ntBASIC6.47□□□□□ -1.37
BHLHE41Q9C0J9 AC073648.3-201ENST00000504939 925 ntBASIC6.47□□□□□ -1.37
BHLHE41Q9C0J9 IMPA1P1-201ENST00000510718 842 ntBASIC6.47□□□□□ -1.37
BHLHE41Q9C0J9 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC6.47□□□□□ -1.37
BHLHE41Q9C0J9 AC073581.1-201ENST00000519036 575 ntBASIC6.47□□□□□ -1.37
BHLHE41Q9C0J9 AP004607.5-201ENST00000532034 217 ntBASIC6.47□□□□□ -1.37
BHLHE41Q9C0J9 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC6.47□□□□□ -1.37
BHLHE41Q9C0J9 NMNAT1P1-201ENST00000554095 876 ntBASIC6.47□□□□□ -1.37
BHLHE41Q9C0J9 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
BHLHE41Q9C0J9 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC6.47□□□□□ -1.37
BHLHE41Q9C0J9 AL132640.2-202ENST00000559732 614 ntBASIC6.47□□□□□ -1.37
BHLHE41Q9C0J9 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
BHLHE41Q9C0J9 AC025678.1-201ENST00000567861 338 ntBASIC6.47□□□□□ -1.37
BHLHE41Q9C0J9 AC004232.1-201ENST00000571388 208 ntBASIC6.47□□□□□ -1.37
BHLHE41Q9C0J9 AC024614.1-201ENST00000577546 307 ntBASIC6.47□□□□□ -1.37
BHLHE41Q9C0J9 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC6.47□□□□□ -1.37
BHLHE41Q9C0J9 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC6.47□□□□□ -1.37
BHLHE41Q9C0J9 AC011447.2-201ENST00000592921 283 ntBASIC6.47□□□□□ -1.37
BHLHE41Q9C0J9 SUGT1P3-202ENST00000604259 383 ntBASIC6.47□□□□□ -1.37
BHLHE41Q9C0J9 Six3os1_4.1-201ENST00000615706 324 ntBASIC6.47□□□□□ -1.37
BHLHE41Q9C0J9 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC6.47□□□□□ -1.37
BHLHE41Q9C0J9 TEX41-279ENST00000629149 609 ntTSL 5 BASIC6.47□□□□□ -1.37
BHLHE41Q9C0J9 AC112487.2-201ENST00000637950 304 ntBASIC6.47□□□□□ -1.37
BHLHE41Q9C0J9 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC6.47□□□□□ -1.37
BHLHE41Q9C0J9 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC6.47□□□□□ -1.37
BHLHE41Q9C0J9 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC6.47□□□□□ -1.37
BHLHE41Q9C0J9 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
BHLHE41Q9C0J9 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
BHLHE41Q9C0J9 CTNNA1P1-201ENST00000515849 2728 ntBASIC6.47□□□□□ -1.37
BHLHE41Q9C0J9 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
BHLHE41Q9C0J9 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.47□□□□□ -1.37
BHLHE41Q9C0J9 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
BHLHE41Q9C0J9 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
BHLHE41Q9C0J9 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
BHLHE41Q9C0J9 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.47□□□□□ -1.37
BHLHE41Q9C0J9 AC110597.1-201ENST00000562669 3176 ntBASIC6.47□□□□□ -1.37
BHLHE41Q9C0J9 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC6.47□□□□□ -1.37
BHLHE41Q9C0J9 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
BHLHE41Q9C0J9 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
BHLHE41Q9C0J9 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.37
BHLHE41Q9C0J9 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.46□□□□□ -1.37
BHLHE41Q9C0J9 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC6.46□□□□□ -1.37
BHLHE41Q9C0J9 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC6.46□□□□□ -1.37
BHLHE41Q9C0J9 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
BHLHE41Q9C0J9 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC6.46□□□□□ -1.37
BHLHE41Q9C0J9 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC6.46□□□□□ -1.37
BHLHE41Q9C0J9 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.46□□□□□ -1.37
BHLHE41Q9C0J9 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
BHLHE41Q9C0J9 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC6.46□□□□□ -1.37
BHLHE41Q9C0J9 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.46□□□□□ -1.37
BHLHE41Q9C0J9 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
BHLHE41Q9C0J9 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.46□□□□□ -1.38
BHLHE41Q9C0J9 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
BHLHE41Q9C0J9 OR52B5P-204ENST00000641744 3467 ntBASIC6.46□□□□□ -1.38
BHLHE41Q9C0J9 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.46□□□□□ -1.38
BHLHE41Q9C0J9 AL033543.1-201ENST00000623440 13454 ntBASIC6.46□□□□□ -1.38
BHLHE41Q9C0J9 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
BHLHE41Q9C0J9 Y_RNA.1-201ENST00000352915 104 ntBASIC6.46□□□□□ -1.38
BHLHE41Q9C0J9 SNORA51.12-201ENST00000384448 134 ntBASIC6.46□□□□□ -1.38
BHLHE41Q9C0J9 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
BHLHE41Q9C0J9 FAT1P1-201ENST00000406588 507 ntBASIC6.46□□□□□ -1.38
BHLHE41Q9C0J9 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC6.46□□□□□ -1.38
BHLHE41Q9C0J9 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC6.46□□□□□ -1.38
BHLHE41Q9C0J9 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC6.46□□□□□ -1.38
BHLHE41Q9C0J9 AL596448.1-201ENST00000415024 392 ntBASIC6.46□□□□□ -1.38
BHLHE41Q9C0J9 AC092634.6-201ENST00000418558 192 ntBASIC6.46□□□□□ -1.38
BHLHE41Q9C0J9 ZNF90P2-204ENST00000419323 1075 ntBASIC6.46□□□□□ -1.38
BHLHE41Q9C0J9 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC6.46□□□□□ -1.38
BHLHE41Q9C0J9 NPM1P34-201ENST00000428821 893 ntBASIC6.46□□□□□ -1.38
BHLHE41Q9C0J9 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
BHLHE41Q9C0J9 MTND6P13-201ENST00000443510 523 ntBASIC6.46□□□□□ -1.38
BHLHE41Q9C0J9 NDUFA5P7-201ENST00000452914 242 ntBASIC6.46□□□□□ -1.38
BHLHE41Q9C0J9 AC099563.1-201ENST00000456086 418 ntBASIC6.46□□□□□ -1.38
BHLHE41Q9C0J9 MEMO1P3-201ENST00000459811 302 ntBASIC6.46□□□□□ -1.38
BHLHE41Q9C0J9 AC017015.1-201ENST00000477387 286 ntBASIC6.46□□□□□ -1.38
BHLHE41Q9C0J9 AC068522.1-201ENST00000482895 345 ntBASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms