Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AC140172.1-201ENST00000502928 141 ntBASIC5.73□□□□□ -1.49
UPF3BQ9BZI7 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.73□□□□□ -1.49
UPF3BQ9BZI7 RNU6-1334P-201ENST00000516032 105 ntBASIC5.73□□□□□ -1.49
UPF3BQ9BZI7 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.73□□□□□ -1.49
UPF3BQ9BZI7 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.73□□□□□ -1.49
UPF3BQ9BZI7 FKBP1BP1-201ENST00000553366 325 ntBASIC5.73□□□□□ -1.49
UPF3BQ9BZI7 IMMP1LP1-201ENST00000605170 488 ntBASIC5.73□□□□□ -1.49
UPF3BQ9BZI7 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC5.73□□□□□ -1.49
UPF3BQ9BZI7 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.73□□□□□ -1.49
UPF3BQ9BZI7 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
UPF3BQ9BZI7 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
UPF3BQ9BZI7 AC015813.6-201ENST00000624409 5808 ntBASIC5.73□□□□□ -1.49
UPF3BQ9BZI7 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.73□□□□□ -1.49
UPF3BQ9BZI7 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
UPF3BQ9BZI7 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
UPF3BQ9BZI7 AC107068.1-201ENST00000563286 4218 ntBASIC5.72□□□□□ -1.49
UPF3BQ9BZI7 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.72□□□□□ -1.49
UPF3BQ9BZI7 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
UPF3BQ9BZI7 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.72□□□□□ -1.49
UPF3BQ9BZI7 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
UPF3BQ9BZI7 AC104260.2-201ENST00000623551 3497 ntBASIC5.72□□□□□ -1.49
UPF3BQ9BZI7 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
UPF3BQ9BZI7 RN7SKP95-201ENST00000362860 303 ntBASIC5.72□□□□□ -1.49
UPF3BQ9BZI7 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
UPF3BQ9BZI7 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
UPF3BQ9BZI7 AL445213.1-201ENST00000412589 747 ntBASIC5.72□□□□□ -1.49
UPF3BQ9BZI7 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.72□□□□□ -1.49
UPF3BQ9BZI7 AL645608.4-201ENST00000423619 154 ntBASIC5.72□□□□□ -1.49
UPF3BQ9BZI7 AC011753.3-201ENST00000443436 406 ntBASIC5.72□□□□□ -1.49
UPF3BQ9BZI7 snoU13.20-201ENST00000459180 104 ntBASIC5.72□□□□□ -1.49
UPF3BQ9BZI7 AL591473.1-201ENST00000464297 313 ntBASIC5.72□□□□□ -1.49
UPF3BQ9BZI7 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.72□□□□□ -1.49
UPF3BQ9BZI7 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
UPF3BQ9BZI7 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
UPF3BQ9BZI7 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.72□□□□□ -1.49
UPF3BQ9BZI7 GCSHP4-201ENST00000538792 439 ntBASIC5.72□□□□□ -1.49
UPF3BQ9BZI7 AL161616.1-201ENST00000611867 286 ntBASIC5.72□□□□□ -1.49
UPF3BQ9BZI7 AC022106.2-201ENST00000620114 757 ntBASIC5.72□□□□□ -1.49
UPF3BQ9BZI7 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.72□□□□□ -1.49
UPF3BQ9BZI7 AC006453.5-201ENST00000636451 619 ntBASIC5.72□□□□□ -1.49
UPF3BQ9BZI7 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
UPF3BQ9BZI7 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.72□□□□□ -1.49
UPF3BQ9BZI7 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
UPF3BQ9BZI7 MAPK10-263ENST00000641052 4307 ntBASIC5.72□□□□□ -1.49
UPF3BQ9BZI7 AC093591.2-201ENST00000565254 3843 ntBASIC5.71□□□□□ -1.49
UPF3BQ9BZI7 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.71□□□□□ -1.49
UPF3BQ9BZI7 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
UPF3BQ9BZI7 AP001642.1-201ENST00000624727 2117 ntBASIC5.71□□□□□ -1.5
UPF3BQ9BZI7 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
UPF3BQ9BZI7 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
UPF3BQ9BZI7 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
UPF3BQ9BZI7 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
UPF3BQ9BZI7 RNU1-83P-201ENST00000363426 164 ntBASIC5.71□□□□□ -1.5
UPF3BQ9BZI7 RNA5SP87-201ENST00000384155 118 ntBASIC5.71□□□□□ -1.5
UPF3BQ9BZI7 Z97832.1-201ENST00000402490 328 ntBASIC5.71□□□□□ -1.5
UPF3BQ9BZI7 AP002530.1-201ENST00000405705 684 ntBASIC5.71□□□□□ -1.5
UPF3BQ9BZI7 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
UPF3BQ9BZI7 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.71□□□□□ -1.5
UPF3BQ9BZI7 EIF4A1P1-201ENST00000420241 934 ntBASIC5.71□□□□□ -1.5
UPF3BQ9BZI7 AC016712.1-201ENST00000431088 378 ntBASIC5.71□□□□□ -1.5
UPF3BQ9BZI7 RPS17P8-201ENST00000434525 335 ntBASIC5.71□□□□□ -1.5
UPF3BQ9BZI7 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.71□□□□□ -1.5
UPF3BQ9BZI7 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
UPF3BQ9BZI7 IGBP1P5-201ENST00000507524 1000 ntBASIC5.71□□□□□ -1.5
UPF3BQ9BZI7 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.71□□□□□ -1.5
UPF3BQ9BZI7 AC138938.1-201ENST00000515431 782 ntBASIC5.71□□□□□ -1.5
UPF3BQ9BZI7 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.71□□□□□ -1.5
UPF3BQ9BZI7 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.71□□□□□ -1.5
UPF3BQ9BZI7 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.71□□□□□ -1.5
UPF3BQ9BZI7 AC008147.3-201ENST00000548666 354 ntBASIC5.71□□□□□ -1.5
UPF3BQ9BZI7 AL110118.1-201ENST00000553543 400 ntBASIC5.71□□□□□ -1.5
UPF3BQ9BZI7 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
UPF3BQ9BZI7 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.71□□□□□ -1.5
UPF3BQ9BZI7 DPRXP4-201ENST00000578053 568 ntBASIC5.71□□□□□ -1.5
UPF3BQ9BZI7 AP000919.1-201ENST00000582850 985 ntBASIC5.71□□□□□ -1.5
UPF3BQ9BZI7 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.71□□□□□ -1.5
UPF3BQ9BZI7 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.71□□□□□ -1.5
UPF3BQ9BZI7 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.71□□□□□ -1.5
UPF3BQ9BZI7 AC020910.3-201ENST00000603701 874 ntBASIC5.71□□□□□ -1.5
UPF3BQ9BZI7 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.71□□□□□ -1.5
UPF3BQ9BZI7 TLK1P1-201ENST00000456760 2440 ntBASIC5.71□□□□□ -1.5
UPF3BQ9BZI7 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
UPF3BQ9BZI7 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.71□□□□□ -1.5
UPF3BQ9BZI7 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.71□□□□□ -1.5
UPF3BQ9BZI7 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
UPF3BQ9BZI7 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
UPF3BQ9BZI7 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
UPF3BQ9BZI7 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
UPF3BQ9BZI7 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
UPF3BQ9BZI7 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
UPF3BQ9BZI7 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.7□□□□□ -1.5
UPF3BQ9BZI7 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.7□□□□□ -1.5
UPF3BQ9BZI7 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
UPF3BQ9BZI7 RN7SKP74-201ENST00000362849 309 ntBASIC5.7□□□□□ -1.5
UPF3BQ9BZI7 RNVU1-6-201ENST00000364688 164 ntBASIC5.7□□□□□ -1.5
UPF3BQ9BZI7 AP000580.1-201ENST00000404439 358 ntBASIC5.7□□□□□ -1.5
UPF3BQ9BZI7 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.7□□□□□ -1.5
UPF3BQ9BZI7 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
UPF3BQ9BZI7 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.7□□□□□ -1.5
UPF3BQ9BZI7 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms