Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
VRK1Q99986 RNU6-304P-201ENST00000364855 107 ntBASIC5.4□□□□□ -1.54
VRK1Q99986 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.54
VRK1Q99986 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
VRK1Q99986 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
VRK1Q99986 RNA5SP80-201ENST00000410475 111 ntBASIC5.4□□□□□ -1.54
VRK1Q99986 RN7SKP240-201ENST00000410583 375 ntBASIC5.4□□□□□ -1.54
VRK1Q99986 AL035422.1-201ENST00000414193 397 ntBASIC5.4□□□□□ -1.54
VRK1Q99986 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.4□□□□□ -1.54
VRK1Q99986 AC016907.1-201ENST00000419483 435 ntBASIC5.4□□□□□ -1.54
VRK1Q99986 ZNF885P-201ENST00000420174 1098 ntBASIC5.4□□□□□ -1.54
VRK1Q99986 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.4□□□□□ -1.54
VRK1Q99986 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC5.4□□□□□ -1.54
VRK1Q99986 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC5.4□□□□□ -1.54
VRK1Q99986 AC112492.2-201ENST00000432774 1030 ntBASIC5.4□□□□□ -1.54
VRK1Q99986 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.4□□□□□ -1.54
VRK1Q99986 RPL12P11-201ENST00000439970 501 ntBASIC5.4□□□□□ -1.54
VRK1Q99986 AC118469.1-201ENST00000442943 488 ntBASIC5.4□□□□□ -1.54
VRK1Q99986 MTND2P4-201ENST00000445034 1004 ntBASIC5.4□□□□□ -1.54
VRK1Q99986 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.4□□□□□ -1.54
VRK1Q99986 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.4□□□□□ -1.54
VRK1Q99986 AC073387.1-201ENST00000453261 709 ntBASIC5.4□□□□□ -1.54
VRK1Q99986 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.4□□□□□ -1.54
VRK1Q99986 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC5.4□□□□□ -1.54
VRK1Q99986 RPL7P18-201ENST00000478965 734 ntBASIC5.4□□□□□ -1.54
VRK1Q99986 NAA50-206ENST00000493454 964 ntTSL 2 BASIC5.4□□□□□ -1.54
VRK1Q99986 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC5.4□□□□□ -1.54
VRK1Q99986 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC5.4□□□□□ -1.54
VRK1Q99986 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
VRK1Q99986 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.4□□□□□ -1.54
VRK1Q99986 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC5.4□□□□□ -1.54
VRK1Q99986 IGHV4-55-201ENST00000520889 368 ntBASIC5.4□□□□□ -1.54
VRK1Q99986 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC5.4□□□□□ -1.54
VRK1Q99986 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.4□□□□□ -1.54
VRK1Q99986 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.4□□□□□ -1.54
VRK1Q99986 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.4□□□□□ -1.54
VRK1Q99986 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC5.4□□□□□ -1.54
VRK1Q99986 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.4□□□□□ -1.54
VRK1Q99986 AL358913.1-201ENST00000554342 121 ntBASIC5.4□□□□□ -1.54
VRK1Q99986 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.4□□□□□ -1.54
VRK1Q99986 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.4□□□□□ -1.54
VRK1Q99986 OR4H6P-201ENST00000563771 921 ntBASIC5.4□□□□□ -1.54
VRK1Q99986 CASC16-202ENST00000563844 610 ntTSL 3 BASIC5.4□□□□□ -1.54
VRK1Q99986 AC090651.1-201ENST00000567865 634 ntBASIC5.4□□□□□ -1.54
VRK1Q99986 MIR4675-201ENST00000577898 77 ntBASIC5.4□□□□□ -1.54
VRK1Q99986 RN7SL475P-201ENST00000583379 298 ntBASIC5.4□□□□□ -1.54
VRK1Q99986 AC005332.4-201ENST00000592752 579 ntBASIC5.4□□□□□ -1.54
VRK1Q99986 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC5.4□□□□□ -1.54
VRK1Q99986 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.4□□□□□ -1.54
VRK1Q99986 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.4□□□□□ -1.54
VRK1Q99986 AC146944.4-201ENST00000602697 718 ntBASIC5.4□□□□□ -1.54
VRK1Q99986 NTAN1P1-201ENST00000603150 646 ntBASIC5.4□□□□□ -1.54
VRK1Q99986 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC5.4□□□□□ -1.54
VRK1Q99986 DUXAP11-201ENST00000603858 526 ntBASIC5.4□□□□□ -1.54
VRK1Q99986 AP003973.1-201ENST00000604639 691 ntBASIC5.4□□□□□ -1.54
VRK1Q99986 AL592221.1-201ENST00000605266 382 ntBASIC5.4□□□□□ -1.54
VRK1Q99986 AC005840.5-201ENST00000619166 599 ntBASIC5.4□□□□□ -1.54
VRK1Q99986 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC5.4□□□□□ -1.54
VRK1Q99986 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.4□□□□□ -1.54
VRK1Q99986 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.4□□□□□ -1.54
VRK1Q99986 AC068620.4-201ENST00000636730 1182 ntBASIC5.4□□□□□ -1.54
VRK1Q99986 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
VRK1Q99986 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.4□□□□□ -1.55
VRK1Q99986 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.4□□□□□ -1.55
VRK1Q99986 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.4□□□□□ -1.55
VRK1Q99986 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC5.4□□□□□ -1.55
VRK1Q99986 AC004158.1-201ENST00000564508 4319 ntBASIC5.4□□□□□ -1.55
VRK1Q99986 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.4□□□□□ -1.55
VRK1Q99986 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.4□□□□□ -1.55
VRK1Q99986 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.55
VRK1Q99986 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
VRK1Q99986 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
VRK1Q99986 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
VRK1Q99986 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VRK1Q99986 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
VRK1Q99986 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
VRK1Q99986 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VRK1Q99986 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
VRK1Q99986 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.39□□□□□ -1.55
VRK1Q99986 ELL2P3-201ENST00000457883 1602 ntBASIC5.39□□□□□ -1.55
VRK1Q99986 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.39□□□□□ -1.55
VRK1Q99986 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
VRK1Q99986 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VRK1Q99986 RNA5SP478-201ENST00000364657 115 ntBASIC5.39□□□□□ -1.55
VRK1Q99986 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
VRK1Q99986 MIR217-201ENST00000384817 110 ntBASIC5.39□□□□□ -1.55
VRK1Q99986 TAF9BP1-201ENST00000396646 746 ntBASIC5.39□□□□□ -1.55
VRK1Q99986 AL590084.2-201ENST00000401481 382 ntBASIC5.39□□□□□ -1.55
VRK1Q99986 TMSB4XP8-201ENST00000402089 135 ntBASIC5.39□□□□□ -1.55
VRK1Q99986 GSTA8P-201ENST00000404253 637 ntBASIC5.39□□□□□ -1.55
VRK1Q99986 RNU2-6P-201ENST00000411404 190 ntBASIC5.39□□□□□ -1.55
VRK1Q99986 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC5.39□□□□□ -1.55
VRK1Q99986 TMSB4XP6-201ENST00000415187 135 ntBASIC5.39□□□□□ -1.55
VRK1Q99986 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.39□□□□□ -1.55
VRK1Q99986 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC5.39□□□□□ -1.55
VRK1Q99986 TMSB4XP1-201ENST00000424567 135 ntBASIC5.39□□□□□ -1.55
VRK1Q99986 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.39□□□□□ -1.55
VRK1Q99986 Z93242.1-201ENST00000427102 353 ntBASIC5.39□□□□□ -1.55
VRK1Q99986 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.39□□□□□ -1.55
VRK1Q99986 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms