Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
PKP4Q99569 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PKP4Q99569 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.09□□□□□ -1.59
PKP4Q99569 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PKP4Q99569 AC002525.1-201ENST00000624392 1622 ntBASIC5.09□□□□□ -1.59
PKP4Q99569 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PKP4Q99569 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PKP4Q99569 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PKP4Q99569 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PKP4Q99569 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PKP4Q99569 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
PKP4Q99569 RNA5SP90-201ENST00000364801 99 ntBASIC5.09□□□□□ -1.59
PKP4Q99569 SNORA27.3-201ENST00000364937 134 ntBASIC5.09□□□□□ -1.59
PKP4Q99569 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PKP4Q99569 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PKP4Q99569 OR8V1P-201ENST00000395193 873 ntBASIC5.09□□□□□ -1.59
PKP4Q99569 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PKP4Q99569 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC5.09□□□□□ -1.59
PKP4Q99569 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC5.09□□□□□ -1.59
PKP4Q99569 OR6C64P-201ENST00000419708 825 ntBASIC5.09□□□□□ -1.59
PKP4Q99569 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PKP4Q99569 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC5.09□□□□□ -1.59
PKP4Q99569 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.09□□□□□ -1.59
PKP4Q99569 AL136231.1-201ENST00000429407 730 ntBASIC5.09□□□□□ -1.59
PKP4Q99569 AL157827.1-201ENST00000447622 132 ntBASIC5.09□□□□□ -1.59
PKP4Q99569 AL627224.1-201ENST00000448334 444 ntBASIC5.09□□□□□ -1.59
PKP4Q99569 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.09□□□□□ -1.59
PKP4Q99569 AL606490.1-201ENST00000452266 765 ntBASIC5.09□□□□□ -1.59
PKP4Q99569 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.09□□□□□ -1.59
PKP4Q99569 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC5.09□□□□□ -1.59
PKP4Q99569 RPS21P4-201ENST00000487122 248 ntBASIC5.09□□□□□ -1.59
PKP4Q99569 TRAV31-201ENST00000502780 342 ntBASIC5.09□□□□□ -1.59
PKP4Q99569 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC5.09□□□□□ -1.59
PKP4Q99569 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC5.09□□□□□ -1.59
PKP4Q99569 AC012400.1-201ENST00000518452 381 ntBASIC5.09□□□□□ -1.59
PKP4Q99569 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PKP4Q99569 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.09□□□□□ -1.59
PKP4Q99569 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.09□□□□□ -1.59
PKP4Q99569 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC5.09□□□□□ -1.59
PKP4Q99569 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.09□□□□□ -1.59
PKP4Q99569 AC079148.1-201ENST00000565944 819 ntBASIC5.09□□□□□ -1.59
PKP4Q99569 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.09□□□□□ -1.59
PKP4Q99569 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.09□□□□□ -1.59
PKP4Q99569 MTATP6P2-201ENST00000603319 678 ntBASIC5.09□□□□□ -1.59
PKP4Q99569 AC096553.1-201ENST00000605169 829 ntBASIC5.09□□□□□ -1.59
PKP4Q99569 MIR6886-201ENST00000619864 61 ntBASIC5.09□□□□□ -1.59
PKP4Q99569 AC010608.3-201ENST00000625048 527 ntBASIC5.09□□□□□ -1.59
PKP4Q99569 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PKP4Q99569 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
PKP4Q99569 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
PKP4Q99569 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
PKP4Q99569 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.6
PKP4Q99569 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.09□□□□□ -1.6
PKP4Q99569 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
PKP4Q99569 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.09□□□□□ -1.6
PKP4Q99569 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
PKP4Q99569 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
PKP4Q99569 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PKP4Q99569 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
PKP4Q99569 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PKP4Q99569 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PKP4Q99569 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.08□□□□□ -1.6
PKP4Q99569 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.08□□□□□ -1.6
PKP4Q99569 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.08□□□□□ -1.6
PKP4Q99569 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PKP4Q99569 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PKP4Q99569 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
PKP4Q99569 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.08□□□□□ -1.6
PKP4Q99569 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.08□□□□□ -1.6
PKP4Q99569 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PKP4Q99569 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
PKP4Q99569 RNU1-43P-201ENST00000365052 165 ntBASIC5.08□□□□□ -1.6
PKP4Q99569 RNU6-609P-201ENST00000365459 107 ntBASIC5.08□□□□□ -1.6
PKP4Q99569 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.08□□□□□ -1.6
PKP4Q99569 AL353692.2-201ENST00000407054 335 ntBASIC5.08□□□□□ -1.6
PKP4Q99569 MIR1286-201ENST00000408112 78 ntBASIC5.08□□□□□ -1.6
PKP4Q99569 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5.08□□□□□ -1.6
PKP4Q99569 RPL26P37-201ENST00000411983 438 ntBASIC5.08□□□□□ -1.6
PKP4Q99569 EI24P4-201ENST00000423683 1078 ntBASIC5.08□□□□□ -1.6
PKP4Q99569 AL161722.2-201ENST00000434731 981 ntBASIC5.08□□□□□ -1.6
PKP4Q99569 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.08□□□□□ -1.6
PKP4Q99569 OR52B5P-201ENST00000435337 951 ntBASIC5.08□□□□□ -1.6
PKP4Q99569 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.08□□□□□ -1.6
PKP4Q99569 AC099063.2-201ENST00000446360 662 ntBASIC5.08□□□□□ -1.6
PKP4Q99569 OR52E3P-201ENST00000452083 936 ntBASIC5.08□□□□□ -1.6
PKP4Q99569 CLIC4P1-201ENST00000453177 535 ntBASIC5.08□□□□□ -1.6
PKP4Q99569 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.08□□□□□ -1.6
PKP4Q99569 Z92846.1-201ENST00000456203 268 ntBASIC5.08□□□□□ -1.6
PKP4Q99569 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
PKP4Q99569 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.08□□□□□ -1.6
PKP4Q99569 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC5.08□□□□□ -1.6
PKP4Q99569 AC016559.2-201ENST00000510759 359 ntBASIC5.08□□□□□ -1.6
PKP4Q99569 AC098976.1-201ENST00000513014 541 ntBASIC5.08□□□□□ -1.6
PKP4Q99569 EIF3KP3-201ENST00000514461 639 ntBASIC5.08□□□□□ -1.6
PKP4Q99569 AC016550.3-201ENST00000515706 767 ntBASIC5.08□□□□□ -1.6
PKP4Q99569 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC5.08□□□□□ -1.6
PKP4Q99569 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC5.08□□□□□ -1.6
PKP4Q99569 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.08□□□□□ -1.6
PKP4Q99569 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.08□□□□□ -1.6
PKP4Q99569 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 138.4 ms