Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 MRPS21P1-201ENST00000453850 223 ntBASIC7.68□□□□□ -1.18
PHOX2BQ99453 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
PHOX2BQ99453 GMFBP1-201ENST00000467831 427 ntBASIC7.68□□□□□ -1.18
PHOX2BQ99453 AC011005.3-201ENST00000491624 395 ntBASIC7.68□□□□□ -1.18
PHOX2BQ99453 AC009567.2-201ENST00000502989 349 ntBASIC7.68□□□□□ -1.18
PHOX2BQ99453 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC7.68□□□□□ -1.18
PHOX2BQ99453 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC7.68□□□□□ -1.18
PHOX2BQ99453 MEPE-206ENST00000511670 550 ntTSL 4 BASIC7.68□□□□□ -1.18
PHOX2BQ99453 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
PHOX2BQ99453 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC7.68□□□□□ -1.18
PHOX2BQ99453 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC7.68□□□□□ -1.18
PHOX2BQ99453 AC068831.4-201ENST00000556118 109 ntBASIC7.68□□□□□ -1.18
PHOX2BQ99453 LINC02289-202ENST00000556781 861 ntTSL 3 BASIC7.68□□□□□ -1.18
PHOX2BQ99453 AC087565.1-201ENST00000565061 391 ntTSL 5 BASIC7.68□□□□□ -1.18
PHOX2BQ99453 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC7.68□□□□□ -1.18
PHOX2BQ99453 AC093074.1-201ENST00000590280 556 ntTSL 4 BASIC7.68□□□□□ -1.18
PHOX2BQ99453 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC7.68□□□□□ -1.18
PHOX2BQ99453 AC074135.1-202ENST00000600223 563 ntTSL 3 BASIC7.68□□□□□ -1.18
PHOX2BQ99453 AL591926.1-201ENST00000620542 217 ntBASIC7.68□□□□□ -1.18
PHOX2BQ99453 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC7.68□□□□□ -1.18
PHOX2BQ99453 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC7.68□□□□□ -1.18
PHOX2BQ99453 AL590396.3-201ENST00000636334 300 ntBASIC7.68□□□□□ -1.18
PHOX2BQ99453 MRPL22-201ENST00000265229 3035 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
PHOX2BQ99453 EYA1-202ENST00000340726 4326 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
PHOX2BQ99453 LINC00208-201ENST00000304233 2150 ntTSL 2 BASIC7.68□□□□□ -1.18
PHOX2BQ99453 AQP4-AS1-201ENST00000568797 3119 ntTSL 2 BASIC7.68□□□□□ -1.18
PHOX2BQ99453 CFAP47-201ENST00000297866 3608 ntTSL 2 BASIC7.68□□□□□ -1.18
PHOX2BQ99453 KIAA1324L-203ENST00000416314 3179 ntAPPRIS P3 TSL 2 BASIC7.68□□□□□ -1.18
PHOX2BQ99453 LHFPL3-AS2-202ENST00000631061 1832 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
PHOX2BQ99453 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
PHOX2BQ99453 NPIPB5-207ENST00000451409 3660 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
PHOX2BQ99453 KLRD1-201ENST00000336164 3258 ntAPPRIS P4 TSL 1 (best) BASIC7.68□□□□□ -1.18
PHOX2BQ99453 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC7.68□□□□□ -1.18
PHOX2BQ99453 HIST1H4E-201ENST00000615164 1487 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
PHOX2BQ99453 TMCC1-AS1-204ENST00000605830 3496 ntTSL 2 BASIC7.68□□□□□ -1.18
PHOX2BQ99453 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
PHOX2BQ99453 AC116158.1-201ENST00000560231 2129 ntBASIC7.67□□□□□ -1.18
PHOX2BQ99453 TNFRSF19-204ENST00000403372 4277 ntAPPRIS ALT2 TSL 2 BASIC7.67□□□□□ -1.18
PHOX2BQ99453 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
PHOX2BQ99453 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC7.67□□□□□ -1.18
PHOX2BQ99453 COL6A5-201ENST00000265379 9214 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
PHOX2BQ99453 HSP90AB2P-201ENST00000507090 2176 ntBASIC7.67□□□□□ -1.18
PHOX2BQ99453 THSD4-AS1-202ENST00000562634 2182 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
PHOX2BQ99453 AL023806.3-201ENST00000638502 2704 ntBASIC7.67□□□□□ -1.18
PHOX2BQ99453 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
PHOX2BQ99453 ZNF544-206ENST00000596652 2818 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
PHOX2BQ99453 ZNF544-217ENST00000600220 2837 ntAPPRIS ALT2 TSL 3 BASIC7.67□□□□□ -1.18
PHOX2BQ99453 TRIM53BP-201ENST00000532912 1720 ntBASIC7.67□□□□□ -1.18
PHOX2BQ99453 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC7.67□□□□□ -1.18
PHOX2BQ99453 AC116351.1-201ENST00000399869 3482 ntTSL 2 BASIC7.67□□□□□ -1.18
PHOX2BQ99453 SORCS1-202ENST00000344440 3009 ntTSL 5 BASIC7.67□□□□□ -1.18
PHOX2BQ99453 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC7.67□□□□□ -1.18
PHOX2BQ99453 ZNF45-204ENST00000589703 2409 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
PHOX2BQ99453 IQCA1-206ENST00000431676 3069 ntAPPRIS ALT2 TSL 2 BASIC7.67□□□□□ -1.18
PHOX2BQ99453 LINC00506-203ENST00000629295 4300 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
PHOX2BQ99453 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
PHOX2BQ99453 SNORA73B-201ENST00000363217 204 ntBASIC7.67□□□□□ -1.18
PHOX2BQ99453 RGS8-203ENST00000367557 859 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
PHOX2BQ99453 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
PHOX2BQ99453 RNU6-831P-201ENST00000384548 107 ntBASIC7.67□□□□□ -1.18
PHOX2BQ99453 AL592114.1-201ENST00000403842 483 ntBASIC7.67□□□□□ -1.18
PHOX2BQ99453 AL359634.1-202ENST00000404721 284 ntBASIC7.67□□□□□ -1.18
PHOX2BQ99453 AL096800.1-201ENST00000405326 893 ntBASIC7.67□□□□□ -1.18
PHOX2BQ99453 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC7.67□□□□□ -1.18
PHOX2BQ99453 AC078974.1-201ENST00000411597 223 ntBASIC7.67□□□□□ -1.18
PHOX2BQ99453 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
PHOX2BQ99453 RPL34P3-201ENST00000421454 338 ntBASIC7.67□□□□□ -1.18
PHOX2BQ99453 PLA2G12AP2-201ENST00000424744 264 ntBASIC7.67□□□□□ -1.18
PHOX2BQ99453 NPM1P18-201ENST00000434232 732 ntBASIC7.67□□□□□ -1.18
PHOX2BQ99453 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC7.67□□□□□ -1.18
PHOX2BQ99453 TIMM8BP2-201ENST00000445940 251 ntBASIC7.67□□□□□ -1.18
PHOX2BQ99453 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC7.67□□□□□ -1.18
PHOX2BQ99453 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC7.67□□□□□ -1.18
PHOX2BQ99453 DHFRP3-201ENST00000455595 559 ntBASIC7.67□□□□□ -1.18
PHOX2BQ99453 RN7SL325P-201ENST00000460434 283 ntBASIC7.67□□□□□ -1.18
PHOX2BQ99453 TDGF1P6-201ENST00000463873 448 ntBASIC7.67□□□□□ -1.18
PHOX2BQ99453 AL591122.1-201ENST00000487348 492 ntBASIC7.67□□□□□ -1.18
PHOX2BQ99453 UBA52P3-201ENST00000491303 382 ntBASIC7.67□□□□□ -1.18
PHOX2BQ99453 AC090453.1-201ENST00000495560 436 ntBASIC7.67□□□□□ -1.18
PHOX2BQ99453 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC7.67□□□□□ -1.18
PHOX2BQ99453 STX18-IT1-201ENST00000515487 542 ntTSL 4 BASIC7.67□□□□□ -1.18
PHOX2BQ99453 RNU4-29P-201ENST00000515943 174 ntBASIC7.67□□□□□ -1.18
PHOX2BQ99453 AC104986.1-201ENST00000517978 436 ntBASIC7.67□□□□□ -1.18
PHOX2BQ99453 MRPS16P1-201ENST00000523462 412 ntBASIC7.67□□□□□ -1.18
PHOX2BQ99453 HHLA3-207ENST00000531950 541 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
PHOX2BQ99453 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC7.67□□□□□ -1.18
PHOX2BQ99453 AL117187.1-201ENST00000555482 181 ntBASIC7.67□□□□□ -1.18
PHOX2BQ99453 AL031722.1-201ENST00000570247 220 ntTSL 5 BASIC7.67□□□□□ -1.18
PHOX2BQ99453 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC7.67□□□□□ -1.18
PHOX2BQ99453 POLR3GP2-201ENST00000588366 668 ntBASIC7.67□□□□□ -1.18
PHOX2BQ99453 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC7.67□□□□□ -1.18
PHOX2BQ99453 AC036176.3-201ENST00000602456 418 ntBASIC7.67□□□□□ -1.18
PHOX2BQ99453 pRNA.12-201ENST00000614353 90 ntBASIC7.67□□□□□ -1.18
PHOX2BQ99453 ACACA-232ENST00000614438 569 ntTSL 2 BASIC7.67□□□□□ -1.18
PHOX2BQ99453 pRNA.3-201ENST00000615048 90 ntBASIC7.67□□□□□ -1.18
PHOX2BQ99453 uc_338.15-201ENST00000615470 191 ntBASIC7.67□□□□□ -1.18
PHOX2BQ99453 AC012629.3-201ENST00000623397 328 ntBASIC7.67□□□□□ -1.18
PHOX2BQ99453 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
PHOX2BQ99453 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC7.67□□□□□ -1.18
PHOX2BQ99453 MTND4LP32-201ENST00000636111 270 ntBASIC7.67□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms