Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AC008079.2-201ENST00000623543 20396 ntBASIC4.82□□□□□ -1.64
ECHDC3Q96DC8 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.82□□□□□ -1.64
ECHDC3Q96DC8 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ECHDC3Q96DC8 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
ECHDC3Q96DC8 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
ECHDC3Q96DC8 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC4.82□□□□□ -1.64
ECHDC3Q96DC8 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.82□□□□□ -1.64
ECHDC3Q96DC8 OR52Y1P-201ENST00000452418 828 ntBASIC4.82□□□□□ -1.64
ECHDC3Q96DC8 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC4.82□□□□□ -1.64
ECHDC3Q96DC8 RNU1-6P-201ENST00000516290 144 ntBASIC4.82□□□□□ -1.64
ECHDC3Q96DC8 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.82□□□□□ -1.64
ECHDC3Q96DC8 SOX5P1-201ENST00000524155 1127 ntBASIC4.82□□□□□ -1.64
ECHDC3Q96DC8 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.82□□□□□ -1.64
ECHDC3Q96DC8 AC008147.3-201ENST00000548666 354 ntBASIC4.82□□□□□ -1.64
ECHDC3Q96DC8 AC133555.2-201ENST00000550213 292 ntBASIC4.82□□□□□ -1.64
ECHDC3Q96DC8 AC093249.4-201ENST00000564755 259 ntBASIC4.82□□□□□ -1.64
ECHDC3Q96DC8 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.82□□□□□ -1.64
ECHDC3Q96DC8 MIR4675-201ENST00000577898 77 ntBASIC4.82□□□□□ -1.64
ECHDC3Q96DC8 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.82□□□□□ -1.64
ECHDC3Q96DC8 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.82□□□□□ -1.64
ECHDC3Q96DC8 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.82□□□□□ -1.64
ECHDC3Q96DC8 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.82□□□□□ -1.64
ECHDC3Q96DC8 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.82□□□□□ -1.64
ECHDC3Q96DC8 AC068790.7-201ENST00000602347 528 ntBASIC4.82□□□□□ -1.64
ECHDC3Q96DC8 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.82□□□□□ -1.64
ECHDC3Q96DC8 AL158062.1-201ENST00000619632 745 ntBASIC4.82□□□□□ -1.64
ECHDC3Q96DC8 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
ECHDC3Q96DC8 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
ECHDC3Q96DC8 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.82□□□□□ -1.64
ECHDC3Q96DC8 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.81□□□□□ -1.64
ECHDC3Q96DC8 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ECHDC3Q96DC8 AL022322.2-201ENST00000624072 20397 ntBASIC4.81□□□□□ -1.64
ECHDC3Q96DC8 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ECHDC3Q96DC8 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
ECHDC3Q96DC8 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ECHDC3Q96DC8 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ECHDC3Q96DC8 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.81□□□□□ -1.64
ECHDC3Q96DC8 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.81□□□□□ -1.64
ECHDC3Q96DC8 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ECHDC3Q96DC8 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ECHDC3Q96DC8 AC233289.1-201ENST00000403700 508 ntBASIC4.81□□□□□ -1.64
ECHDC3Q96DC8 U3.35-201ENST00000408405 208 ntBASIC4.81□□□□□ -1.64
ECHDC3Q96DC8 OR51B3P-201ENST00000412287 913 ntBASIC4.81□□□□□ -1.64
ECHDC3Q96DC8 AL359265.2-201ENST00000434367 631 ntBASIC4.81□□□□□ -1.64
ECHDC3Q96DC8 AL450263.2-201ENST00000439400 589 ntBASIC4.81□□□□□ -1.64
ECHDC3Q96DC8 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.81□□□□□ -1.64
ECHDC3Q96DC8 AL513533.1-201ENST00000453728 415 ntBASIC4.81□□□□□ -1.64
ECHDC3Q96DC8 AP000942.1-201ENST00000463969 747 ntBASIC4.81□□□□□ -1.64
ECHDC3Q96DC8 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.81□□□□□ -1.64
ECHDC3Q96DC8 AC016687.1-201ENST00000482574 353 ntBASIC4.81□□□□□ -1.64
ECHDC3Q96DC8 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC4.81□□□□□ -1.64
ECHDC3Q96DC8 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ECHDC3Q96DC8 AC091868.1-201ENST00000508746 304 ntBASIC4.81□□□□□ -1.64
ECHDC3Q96DC8 RN7SKP34-201ENST00000516142 244 ntBASIC4.81□□□□□ -1.64
ECHDC3Q96DC8 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.81□□□□□ -1.64
ECHDC3Q96DC8 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.81□□□□□ -1.64
ECHDC3Q96DC8 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.81□□□□□ -1.64
ECHDC3Q96DC8 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.81□□□□□ -1.64
ECHDC3Q96DC8 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ECHDC3Q96DC8 DUX4L52-201ENST00000549363 777 ntBASIC4.81□□□□□ -1.64
ECHDC3Q96DC8 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC4.81□□□□□ -1.64
ECHDC3Q96DC8 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.81□□□□□ -1.64
ECHDC3Q96DC8 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.81□□□□□ -1.64
ECHDC3Q96DC8 AC124856.1-201ENST00000600819 896 ntBASIC4.81□□□□□ -1.64
ECHDC3Q96DC8 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.81□□□□□ -1.64
ECHDC3Q96DC8 AL034370.1-201ENST00000397254 1590 ntBASIC4.81□□□□□ -1.64
ECHDC3Q96DC8 THAP12P5-201ENST00000405864 2275 ntBASIC4.81□□□□□ -1.64
ECHDC3Q96DC8 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.81□□□□□ -1.64
ECHDC3Q96DC8 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.81□□□□□ -1.64
ECHDC3Q96DC8 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
ECHDC3Q96DC8 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.8□□□□□ -1.64
ECHDC3Q96DC8 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
ECHDC3Q96DC8 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
ECHDC3Q96DC8 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
ECHDC3Q96DC8 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
ECHDC3Q96DC8 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.8□□□□□ -1.64
ECHDC3Q96DC8 AL442639.1-201ENST00000625030 1899 ntBASIC4.8□□□□□ -1.64
ECHDC3Q96DC8 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
ECHDC3Q96DC8 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.8□□□□□ -1.64
ECHDC3Q96DC8 AC008549.2-201ENST00000333482 706 ntBASIC4.8□□□□□ -1.64
ECHDC3Q96DC8 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
ECHDC3Q96DC8 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.8□□□□□ -1.64
ECHDC3Q96DC8 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
ECHDC3Q96DC8 MIR585-201ENST00000384887 94 ntBASIC4.8□□□□□ -1.64
ECHDC3Q96DC8 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.8□□□□□ -1.64
ECHDC3Q96DC8 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.8□□□□□ -1.64
ECHDC3Q96DC8 Z80107.2-201ENST00000445127 392 ntBASIC4.8□□□□□ -1.64
ECHDC3Q96DC8 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.8□□□□□ -1.64
ECHDC3Q96DC8 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
ECHDC3Q96DC8 USP9YP2-201ENST00000504503 1000 ntBASIC4.8□□□□□ -1.64
ECHDC3Q96DC8 USP9YP1-201ENST00000513521 1002 ntBASIC4.8□□□□□ -1.64
ECHDC3Q96DC8 AC018442.3-201ENST00000523025 183 ntBASIC4.8□□□□□ -1.64
ECHDC3Q96DC8 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.8□□□□□ -1.64
ECHDC3Q96DC8 AL110118.1-201ENST00000553543 400 ntBASIC4.8□□□□□ -1.64
ECHDC3Q96DC8 AC105129.1-201ENST00000560250 297 ntBASIC4.8□□□□□ -1.64
ECHDC3Q96DC8 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.8□□□□□ -1.64
ECHDC3Q96DC8 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.8□□□□□ -1.64
ECHDC3Q96DC8 MIR4270-201ENST00000581799 70 ntBASIC4.8□□□□□ -1.64
ECHDC3Q96DC8 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.8□□□□□ -1.64
ECHDC3Q96DC8 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms