Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.64□□□□□ -1.51
ATP2A3Q93084 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ATP2A3Q93084 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
ATP2A3Q93084 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
ATP2A3Q93084 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.64□□□□□ -1.51
ATP2A3Q93084 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
ATP2A3Q93084 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ATP2A3Q93084 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
ATP2A3Q93084 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
ATP2A3Q93084 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
ATP2A3Q93084 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
ATP2A3Q93084 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
ATP2A3Q93084 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
ATP2A3Q93084 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
ATP2A3Q93084 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ATP2A3Q93084 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.63□□□□□ -1.51
ATP2A3Q93084 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
ATP2A3Q93084 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
ATP2A3Q93084 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
ATP2A3Q93084 RPL23P2-201ENST00000320371 421 ntBASIC5.63□□□□□ -1.51
ATP2A3Q93084 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
ATP2A3Q93084 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
ATP2A3Q93084 RNU6-1257P-201ENST00000384625 110 ntBASIC5.63□□□□□ -1.51
ATP2A3Q93084 MIR122-201ENST00000385044 85 ntBASIC5.63□□□□□ -1.51
ATP2A3Q93084 AL133388.1-201ENST00000404509 287 ntBASIC5.63□□□□□ -1.51
ATP2A3Q93084 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.63□□□□□ -1.51
ATP2A3Q93084 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.63□□□□□ -1.51
ATP2A3Q93084 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.63□□□□□ -1.51
ATP2A3Q93084 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.63□□□□□ -1.51
ATP2A3Q93084 AC093655.2-201ENST00000425735 631 ntBASIC5.63□□□□□ -1.51
ATP2A3Q93084 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.63□□□□□ -1.51
ATP2A3Q93084 GSTM5P1-201ENST00000434751 660 ntBASIC5.63□□□□□ -1.51
ATP2A3Q93084 AC073465.2-201ENST00000440938 498 ntBASIC5.63□□□□□ -1.51
ATP2A3Q93084 RPL5P25-201ENST00000441148 775 ntBASIC5.63□□□□□ -1.51
ATP2A3Q93084 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC5.63□□□□□ -1.51
ATP2A3Q93084 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.63□□□□□ -1.51
ATP2A3Q93084 AL645937.3-201ENST00000453647 936 ntBASIC5.63□□□□□ -1.51
ATP2A3Q93084 PSMC1P13-201ENST00000458195 985 ntBASIC5.63□□□□□ -1.51
ATP2A3Q93084 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.63□□□□□ -1.51
ATP2A3Q93084 RPL32P14-201ENST00000463196 378 ntBASIC5.63□□□□□ -1.51
ATP2A3Q93084 RPS18P6-201ENST00000476880 458 ntBASIC5.63□□□□□ -1.51
ATP2A3Q93084 RPSAP51-201ENST00000497462 645 ntBASIC5.63□□□□□ -1.51
ATP2A3Q93084 GTF2IP9-201ENST00000502460 301 ntBASIC5.63□□□□□ -1.51
ATP2A3Q93084 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.63□□□□□ -1.51
ATP2A3Q93084 AP006245.2-201ENST00000522004 300 ntBASIC5.63□□□□□ -1.51
ATP2A3Q93084 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.63□□□□□ -1.51
ATP2A3Q93084 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.63□□□□□ -1.51
ATP2A3Q93084 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ATP2A3Q93084 AC009237.13-201ENST00000603193 276 ntBASIC5.63□□□□□ -1.51
ATP2A3Q93084 AC009163.6-201ENST00000612367 342 ntBASIC5.63□□□□□ -1.51
ATP2A3Q93084 uc_338.7-201ENST00000621834 124 ntBASIC5.63□□□□□ -1.51
ATP2A3Q93084 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC5.63□□□□□ -1.51
ATP2A3Q93084 AC090617.9-201ENST00000623751 147 ntBASIC5.63□□□□□ -1.51
ATP2A3Q93084 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.63□□□□□ -1.51
ATP2A3Q93084 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ATP2A3Q93084 AL627171.1-201ENST00000618845 1308 ntBASIC5.63□□□□□ -1.51
ATP2A3Q93084 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
ATP2A3Q93084 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
ATP2A3Q93084 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ATP2A3Q93084 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ATP2A3Q93084 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ATP2A3Q93084 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
ATP2A3Q93084 AC011493.1-201ENST00000596753 1632 ntBASIC5.63□□□□□ -1.51
ATP2A3Q93084 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.63□□□□□ -1.51
ATP2A3Q93084 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
ATP2A3Q93084 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
ATP2A3Q93084 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.62□□□□□ -1.51
ATP2A3Q93084 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
ATP2A3Q93084 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
ATP2A3Q93084 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
ATP2A3Q93084 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
ATP2A3Q93084 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.62□□□□□ -1.51
ATP2A3Q93084 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
ATP2A3Q93084 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
ATP2A3Q93084 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
ATP2A3Q93084 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
ATP2A3Q93084 U3.2-201ENST00000362981 210 ntBASIC5.62□□□□□ -1.51
ATP2A3Q93084 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
ATP2A3Q93084 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
ATP2A3Q93084 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.62□□□□□ -1.51
ATP2A3Q93084 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC5.62□□□□□ -1.51
ATP2A3Q93084 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
ATP2A3Q93084 RNU1-149P-201ENST00000390870 161 ntBASIC5.62□□□□□ -1.51
ATP2A3Q93084 RNA5SP487-201ENST00000410186 122 ntBASIC5.62□□□□□ -1.51
ATP2A3Q93084 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
ATP2A3Q93084 AL606495.1-201ENST00000422100 813 ntBASIC5.62□□□□□ -1.51
ATP2A3Q93084 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.62□□□□□ -1.51
ATP2A3Q93084 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.62□□□□□ -1.51
ATP2A3Q93084 RPL12P17-201ENST00000432393 498 ntBASIC5.62□□□□□ -1.51
ATP2A3Q93084 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.62□□□□□ -1.51
ATP2A3Q93084 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
ATP2A3Q93084 NPM1P39-201ENST00000449818 867 ntBASIC5.62□□□□□ -1.51
ATP2A3Q93084 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.62□□□□□ -1.51
ATP2A3Q93084 RPL23AP23-201ENST00000452590 471 ntBASIC5.62□□□□□ -1.51
ATP2A3Q93084 RN7SL808P-201ENST00000496066 299 ntBASIC5.62□□□□□ -1.51
ATP2A3Q93084 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.62□□□□□ -1.51
ATP2A3Q93084 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
ATP2A3Q93084 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.62□□□□□ -1.51
ATP2A3Q93084 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.62□□□□□ -1.51
ATP2A3Q93084 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms